RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 CYP4F8P98187 520 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 CHIT1Q13231 466 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 DNASE1L3Q13609 305 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 ZNF846Q147U1 533 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 CLCA4Q14CN2 919 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 VMACQ2NL98 169 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 LYPLAL1Q5VWZ2 237 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 TMCO2Q7Z6W1 182 aaPredicted RBP15.33■□□□□ 0.04
LDLR-204ENST00000545707 HORMAD1Q86X24 394 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 PTOV1Q86YD1 416 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 BBS7Q8IWZ6 715 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 MYLIPQ8WY64 445 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 MAL2Q969L2 176 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 TESCQ96BS2 214 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 HIST1H2AHQ96KK5 128 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 HIST1H2AJQ99878 128 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 TMEM175Q9BSA9 504 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 H2AFJQ9BTM1 129 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 AKIP1Q9NQ31 210 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 AP3M1Q9Y2T2 418 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 CASP8AP2Q9UKL3 1982 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 KRBA1A5PL33 1030 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 ABLIM3O94929 683 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 FABP3P05413 133 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 UGT2B4P06133 528 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 LCKP06239 509 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 CD22P20273 847 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 ARHGDIAP52565 204 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 CCL23P55773 120 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 WNT3P56703 355 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 KCNC4Q03721 635 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 ZNF648Q5T619 568 aaPredicted RBP15.32■□□□□ 0.04
LDLR-204ENST00000545707 FRG2Q64ET8 278 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 ASB11Q8WXH4 323 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 NELL1Q92832 810 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 ZNF566Q969W8 418 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 FRG2BQ96QU4 278 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 SLC12A9Q9BXP2 914 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 TM9SF3Q9HD45 589 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 AMBNQ9NP70 447 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 THSD7BQ9C0I4 1608 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 M0QX08 132 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 FAM20BO75063 409 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 LAMP1P11279 417 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 COX7A2P14406 83 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 GJA1P17302 382 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 IL1RNP18510 177 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 FUT4P22083 530 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 ACVR2AP27037 513 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 SERPINA4P29622 427 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 CREMQ03060 361 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 FOXD4Q12950 439 aaPredicted RBP15.32■□□□□ 0.04
LDLR-204ENST00000545707 IL18R1Q13478 541 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 DUOXA1Q1HG43 343 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 CAPN13Q6MZZ7 669 aaPredicted RBP15.32■□□□□ 0.04
LDLR-204ENST00000545707 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.32■□□□□ 0.049e-8■■■■□ 21.8
LDLR-204ENST00000545707 AHSA2Q719I0 299 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 P2RY8Q86VZ1 359 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 SETD9Q8NE22 299 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 SH3KBP1Q96B97 665 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 YIPF6Q96EC8 236 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 HMG20AQ9NP66 347 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 POLE4Q9NR33 117 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 KRT84Q9NSB2 600 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 KIF17Q9P2E2 1029 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 B3GNT3Q9Y2A9 372 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 TPRKBQ9Y3C4 175 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 PCDHGB1Q9Y5G3 927 aa15.32■□□□□ 0.04
LDLR-204ENST00000545707 AGAP14A8MT82 685 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 GFRA2O00451 464 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 NRG2O14511 850 aaPredicted RBP15.31■□□□□ 0.04
LDLR-204ENST00000545707 SCN2BO60939 215 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 IGSF6O95976 241 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 NTRK1P04629 796 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 BMP4P12644 408 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 DNAJA1P31689 397 aaKnown RBP15.31■□□□□ 0.04
LDLR-204ENST00000545707 KRT20P35900 424 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 SLC6A12P48065 614 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 RAB15P59190 212 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 VEPH1Q14D04 833 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 INAQ16352 499 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 Q6ZNB5 142 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 LRRC70Q7Z2Q7 622 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 DEFB128Q7Z7B8 93 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 SLC43A3Q8NBI5 491 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 OR2AP1Q8NGE2 309 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 IGSF21Q96ID5 467 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 MRPL9Q9BYD2 267 aaKnown RBP15.31■□□□□ 0.04
LDLR-204ENST00000545707 SMG9Q9H0W8 520 aaKnown RBP15.31■□□□□ 0.04
LDLR-204ENST00000545707 SCN3BQ9NY72 215 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 KIAA1522Q9P206 1035 aaPredicted RBP15.31■□□□□ 0.04
LDLR-204ENST00000545707 BACE2Q9Y5Z0 518 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 MAGEB17A8MXT2 336 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 PCDHGA12O60330 932 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 JRKO75564 520 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 MYCP01106 439 aaPredicted RBP15.31■□□□□ 0.04
LDLR-204ENST00000545707 VIPP01282 170 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 TM4SF4P48230 202 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 MAD2L1BPQ15013 274 aaPredicted RBP15.31■□□□□ 0.04
LDLR-204ENST00000545707 ACOX1Q15067 660 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms