RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 CCDC38Q502W7 563 aa10.9□□□□□ -0.66
TMEM258-208ENST00000545210 KRTCAP3Q53RY4 240 aa10.9□□□□□ -0.66
TMEM258-208ENST00000545210 KCTD11Q693B1 232 aa10.9□□□□□ -0.66
TMEM258-208ENST00000545210 FCRLBQ6BAA4 426 aa10.9□□□□□ -0.66
TMEM258-208ENST00000545210 RNF44Q7L0R7 432 aa10.9□□□□□ -0.66
TMEM258-208ENST00000545210 KLHDC8BQ8IXV7 354 aa10.9□□□□□ -0.66
TMEM258-208ENST00000545210 BEST3Q8N1M1 668 aa10.9□□□□□ -0.66
TMEM258-208ENST00000545210 OR2A1Q8NGT9 310 aa10.9□□□□□ -0.66
TMEM258-208ENST00000545210 LKAAEAR1Q8TD35 194 aa10.9□□□□□ -0.66
TMEM258-208ENST00000545210 AGAP11Q8TF27 550 aa10.9□□□□□ -0.66
TMEM258-208ENST00000545210 CA5BP1Q8WTZ4 195 aa10.9□□□□□ -0.66
TMEM258-208ENST00000545210 KRT35Q92764 455 aa10.9□□□□□ -0.66
TMEM258-208ENST00000545210 MMABQ96EY8 250 aaPredicted RBP10.9□□□□□ -0.66
TMEM258-208ENST00000545210 IMMP1LQ96LU5 166 aa10.9□□□□□ -0.66
TMEM258-208ENST00000545210 CCDC42Q96M95 316 aa10.9□□□□□ -0.66
TMEM258-208ENST00000545210 ZFYVE21Q9BQ24 234 aa10.9□□□□□ -0.66
TMEM258-208ENST00000545210 TMEM121Q9BTD3 319 aa10.9□□□□□ -0.66
TMEM258-208ENST00000545210 TUBB6Q9BUF5 446 aa10.9□□□□□ -0.66
TMEM258-208ENST00000545210 RAB11FIP5Q9BXF6 653 aa10.9□□□□□ -0.66
TMEM258-208ENST00000545210 HES7Q9BYE0 225 aa10.9□□□□□ -0.66
TMEM258-208ENST00000545210 MKKSQ9NPJ1 570 aaPredicted RBP10.9□□□□□ -0.66
TMEM258-208ENST00000545210 ZNHIT6Q9NWK9 470 aaKnown RBP10.9□□□□□ -0.66
TMEM258-208ENST00000545210 ANKRD10Q9NXR5 420 aa10.9□□□□□ -0.66
TMEM258-208ENST00000545210 MKL2Q9ULH7 1088 aa10.9□□□□□ -0.66
TMEM258-208ENST00000545210 NPIPA1Q9UND3 350 aa10.9□□□□□ -0.66
TMEM258-208ENST00000545210 CDC14AQ9UNH5 594 aa10.9□□□□□ -0.66
TMEM258-208ENST00000545210 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.9□□□□□ -0.66
TMEM258-208ENST00000545210 KLK4Q9Y5K2 254 aa10.9□□□□□ -0.66
TMEM258-208ENST00000545210 ANKHD1Q8IWZ3 2542 aaKnown RBP10.9□□□□□ -0.67
TMEM258-208ENST00000545210 INTS1Q8N201 2190 aaKnown RBP10.89□□□□□ -0.67
TMEM258-208ENST00000545210 IGHV3-20A0A0C4DH32 117 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 RCCD1A6NED2 376 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 F8W8V4 182 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 H0YGG7 62 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 PRPF4O43172 522 aaKnown RBP eCLIP10.89□□□□□ -0.67
TMEM258-208ENST00000545210 SEC24DO94855 1032 aaPredicted RBP10.89□□□□□ -0.67
TMEM258-208ENST00000545210 MLYCDO95822 493 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 APOA4P06727 396 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 PSMA3P25788 255 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 AOAHP28039 575 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 EEF1DP29692 281 aaKnown RBP10.89□□□□□ -0.67
TMEM258-208ENST00000545210 SLC26A3P40879 764 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 BDKRB1P46663 353 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 ARF3P61204 181 aaPredicted RBP10.89□□□□□ -0.67
TMEM258-208ENST00000545210 HSF1Q00613 529 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 TUBA3CQ13748 450 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 HKDC1Q2TB90 917 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 ACER2Q5QJU3 275 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 FBXO42Q6P3S6 717 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 TUBA3EQ6PEY2 450 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 TTC23LQ6PF05 361 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 TMEM205Q6UW68 189 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 DOLPP1Q86YN1 238 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 MMP21Q8N119 569 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 KRT222Q8N1A0 295 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 MDS2Q8NDY4 140 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 HDAC10Q969S8 669 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 RAD51AP1Q96B01 352 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 SDCCAG3Q96C92 435 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 TREX2Q9BQ50 279 aaPredicted RBP10.89□□□□□ -0.67
TMEM258-208ENST00000545210 DPH7Q9BTV6 452 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 TSSK1BQ9BXA7 367 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 TGIF2Q9GZN2 237 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 SYNPO2LQ9H987 977 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 LRRC40Q9H9A6 602 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 TTC7AQ9ULT0 858 aaPredicted RBP10.89□□□□□ -0.67
TMEM258-208ENST00000545210 RUVBL2Q9Y230 463 aaKnown RBP10.89□□□□□ -0.67
TMEM258-208ENST00000545210 RUVBL1Q9Y265 456 aaKnown RBP10.89□□□□□ -0.67
TMEM258-208ENST00000545210 PCDHGB6Q9Y5F9 930 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 NFS1Q9Y697 457 aa10.89□□□□□ -0.67
TMEM258-208ENST00000545210 SPG11Q96JI7 2443 aa10.88□□□□□ -0.67
TMEM258-208ENST00000545210 A0A0A6YYC8 382 aaPredicted RBP10.88□□□□□ -0.67
TMEM258-208ENST00000545210 A0A1W2PPV9 198 aa10.88□□□□□ -0.67
TMEM258-208ENST00000545210 OR2A25A4D2G3 310 aa10.88□□□□□ -0.67
TMEM258-208ENST00000545210 I3L1I5 382 aaPredicted RBP10.88□□□□□ -0.67
TMEM258-208ENST00000545210 ADAM10O14672 748 aa10.88□□□□□ -0.67
TMEM258-208ENST00000545210 PJA2O43164 708 aa10.88□□□□□ -0.67
TMEM258-208ENST00000545210 ASNA1O43681 348 aa10.88□□□□□ -0.67
TMEM258-208ENST00000545210 SLCO2B1O94956 709 aa10.88□□□□□ -0.67
TMEM258-208ENST00000545210 C1orf105O95561 183 aa10.88□□□□□ -0.67
TMEM258-208ENST00000545210 METTL18O95568 372 aa10.88□□□□□ -0.67
TMEM258-208ENST00000545210 GOT2P00505 430 aaKnown RBP10.88□□□□□ -0.67
TMEM258-208ENST00000545210 ANXA5P08758 320 aa10.88□□□□□ -0.67
TMEM258-208ENST00000545210 C8orf89P0DMQ9 161 aa10.88□□□□□ -0.67
TMEM258-208ENST00000545210 CD99P14209 185 aa10.88□□□□□ -0.67
TMEM258-208ENST00000545210 CD96P40200 585 aa10.88□□□□□ -0.67
TMEM258-208ENST00000545210 EMP3P54852 163 aa10.88□□□□□ -0.67
TMEM258-208ENST00000545210 HADHBP55084 474 aaKnown RBP10.88□□□□□ -0.67
TMEM258-208ENST00000545210 COPS2P61201 443 aa10.88□□□□□ -0.67
TMEM258-208ENST00000545210 SEMA3AQ14563 771 aa10.88□□□□□ -0.67
TMEM258-208ENST00000545210 PARP6Q2NL67 630 aa10.88□□□□□ -0.67
TMEM258-208ENST00000545210 BTBD16Q32M84 506 aa10.88□□□□□ -0.67
TMEM258-208ENST00000545210 SPINK14Q6IE38 97 aa10.88□□□□□ -0.67
TMEM258-208ENST00000545210 LRRC8BQ6P9F7 803 aa10.88□□□□□ -0.67
TMEM258-208ENST00000545210 ZC3H7AQ8IWR0 971 aaKnown RBP10.88□□□□□ -0.67
TMEM258-208ENST00000545210 RAB42Q8N4Z0 105 aa10.88□□□□□ -0.67
TMEM258-208ENST00000545210 TAB3Q8N5C8 712 aaPredicted RBP10.88□□□□□ -0.67
TMEM258-208ENST00000545210 CSNK1A1LQ8N752 337 aa10.88□□□□□ -0.67
TMEM258-208ENST00000545210 OR13J1Q8NGT2 312 aa10.88□□□□□ -0.67
TMEM258-208ENST00000545210 PHF10Q8WUB8 498 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms