RNA–Protein interactions for RNA: ENST00000544967.5

USP28-213, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-213ENST00000544967 TK2O00142 265 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 ARNTLO00327 626 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 PLK4O00444 970 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 RGS10O43665 173 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 SLC35E2BP0CK96 405 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 KCNA5P22460 613 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 MGAT1P26572 445 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 YAP1P46937 504 aaKnown RBP5.12□□□□□ -1.59
USP28-213ENST00000544967 NKX2-5P52952 324 aaPredicted RBP5.12□□□□□ -1.59
USP28-213ENST00000544967 RAB10P61026 200 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 POU4F1Q01851 419 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 CTU2Q2VPK5 515 aaKnown RBP5.12□□□□□ -1.59
USP28-213ENST00000544967 SPANXN2Q5MJ10 180 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 VARS2Q5ST30 1063 aaKnown RBP5.12□□□□□ -1.59
USP28-213ENST00000544967 ANKRD54Q6NXT1 300 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 C19orf48Q6RUI8 117 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 GDPGP1Q6ZNW5 385 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 CENPLQ8N0S6 344 aaPredicted RBP5.12□□□□□ -1.59
USP28-213ENST00000544967 FSTL5Q8N475 847 aaPredicted RBP5.12□□□□□ -1.59
USP28-213ENST00000544967 EMC1Q8N766 993 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 FAM169BQ8N8A8 192 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 OR8J3Q8NGG0 315 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 DNAJB8Q8NHS0 232 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 BIRC7Q96CA5 298 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 ACSF2Q96CM8 615 aaPredicted RBP5.12□□□□□ -1.59
USP28-213ENST00000544967 GIMAP5Q96F15 307 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 TOE1Q96GM8 510 aaKnown RBP5.12□□□□□ -1.59
USP28-213ENST00000544967 OR2A14Q96R47 310 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 VAT1Q99536 393 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 TM9SF2Q99805 663 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 NUSAP1Q9BXS6 441 aaKnown RBP5.12□□□□□ -1.59
USP28-213ENST00000544967 ADNPQ9H2P0 1102 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 FBRSQ9HAH7 460 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 MED9Q9NWA0 146 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 TOR4AQ9NXH8 423 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 PAQR5Q9NXK6 330 aaPredicted RBP5.12□□□□□ -1.59
USP28-213ENST00000544967 GLTPQ9NZD2 209 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 EHD3Q9NZN3 535 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 AFF4Q9UHB7 1163 aaKnown RBP5.12□□□□□ -1.59
USP28-213ENST00000544967 ZMYM5Q9UJ78 669 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 ORC6Q9Y5N6 252 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 USP3Q9Y6I4 520 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 OR5K4A6NMS3 321 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 C12orf71A8MTZ7 269 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 HHLA1C9JL84 531 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 F8W810 466 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 G3V2T6 193 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 STX16O14662 325 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 OR7A10O76100 309 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 POMCP01189 267 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 TNNC2P02585 160 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 PDGFAP04085 211 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 RPLP0P05388 317 aaKnown RBP5.12□□□□□ -1.59
USP28-213ENST00000544967 ANXA6P08133 673 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 ZDHHC11BP0C7U3 371 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 CPN2P22792 545 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 HNF1BP35680 557 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 SOX6P35712 828 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 TUFMP49411 452 aaKnown RBP5.12□□□□□ -1.59
USP28-213ENST00000544967 AP1S2P56377 157 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 PLCL1Q15111 1095 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 KCTD11Q693B1 232 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 KDM4DQ6B0I6 523 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 TIGD7Q6NT04 549 aaPredicted RBP5.12□□□□□ -1.59
USP28-213ENST00000544967 CES5AQ6NT32 575 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 DENND1BQ6P3S1 775 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 ZNF600Q6ZNG1 722 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 BNIPLQ7Z465 357 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 SNX20Q7Z614 316 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 PTAR1Q7Z6K3 402 aaPredicted RBP5.12□□□□□ -1.59
USP28-213ENST00000544967 CMC1Q7Z7K0 106 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 ADGRD2Q7Z7M1 963 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 SYVN1Q86TM6 617 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 CUZD1Q86UP6 607 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 KIF18BQ86Y91 864 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 TMC8Q8IU68 726 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 PHYKPLQ8IUZ5 450 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 ADHFE1Q8IWW8 467 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 C9orf43Q8TAL5 461 aaPredicted RBP5.12□□□□□ -1.59
USP28-213ENST00000544967 LRRC20Q8TCA0 184 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 TMBIM1Q969X1 311 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 CMTM3Q96MX0 182 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 LPIN3Q9BQK8 851 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 SLC22A4Q9H015 551 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 PPA2Q9H2U2 334 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 TIGARQ9NQ88 270 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 NPDC1Q9NQX5 325 aaPredicted RBP5.12□□□□□ -1.59
USP28-213ENST00000544967 SLC39A1Q9NY26 324 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 POLHQ9Y253 713 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 GPSM3Q9Y4H4 160 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 ZFP37Q9Y6Q3 630 aaPredicted RBP5.12□□□□□ -1.59
USP28-213ENST00000544967 MEIOCA2RUB1 952 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 LOC730098B7Z3J9 87 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 TFECO14948 347 aaPredicted RBP5.11□□□□□ -1.59
USP28-213ENST00000544967 CYP7B1O75881 506 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 PDE9AO76083 593 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 IPO13O94829 963 aaKnown RBP5.11□□□□□ -1.59
USP28-213ENST00000544967 CLIC3O95833 236 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 ANGPTL1O95841 491 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 CST3P01034 146 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms