RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 TMEM30AQ9NV96 361 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 EVA1BQ9NVM1 165 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 GLTPQ9NZD2 209 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 CIB4A0PJX0 185 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 OR1I1O60431 355 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 NDUFS3O75489 264 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 GUCA1CO95843 209 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 PDGFAP04085 211 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 TP53P04637 393 aaPredicted RBP12.32□□□□□ -0.44
SMG8-202ENST00000543872 FABP3P05413 133 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 RPS5P46782 204 aaKnown RBP12.32□□□□□ -0.44
SMG8-202ENST00000543872 NRIP1P48552 1158 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 HK3P52790 923 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 BNC1Q01954 994 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 FAM187BQ17R55 369 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 PYDC2Q56P42 97 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 PM20D1Q6GTS8 502 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 PDE12Q6L8Q7 609 aaKnown RBP12.32□□□□□ -0.44
SMG8-202ENST00000543872 DOK6Q6PKX4 331 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 PLET1Q6UQ28 207 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 TIGD4Q8IY51 512 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 VWA5B2Q8N398 1253 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 SIDT2Q8NBJ9 832 aaKnown RBP12.32□□□□□ -0.44
SMG8-202ENST00000543872 OR4L1Q8NH43 312 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 COL21A1Q96P44 957 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 OLA1Q9NTK5 396 aaKnown RBP12.32□□□□□ -0.44
SMG8-202ENST00000543872 ERVW-1Q9UQF0 538 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 COL11A2P13942 1736 aaPredicted RBP12.31□□□□□ -0.44
SMG8-202ENST00000543872 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 OR5K3A6NET4 321 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 NT5C1B-RDH14C9J2C7 533 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 PLD2O14939 933 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 TLR5O60602 858 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 PAGE1O75459 146 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 GPX5O75715 221 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 TGFB3P10600 412 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 FOSL1P15407 271 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 HYAL2Q12891 473 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 ZNF79Q15937 498 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 INO80DQ53TQ3 878 aaPredicted RBP12.31□□□□□ -0.44
SMG8-202ENST00000543872 SHEQ5VZ18 495 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 NADSYN1Q6IA69 706 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 CCDC117Q8IWD4 279 aaPredicted RBP12.31□□□□□ -0.44
SMG8-202ENST00000543872 OR52J3Q8NH60 311 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 GIMAP5Q96F15 307 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 FCRL2Q96LA5 508 aaPredicted RBP12.31□□□□□ -0.44
SMG8-202ENST00000543872 SIGLEC11Q96RL6 698 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 SMOQ99835 787 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 TTLL2Q9BWV7 592 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 PDGFCQ9NRA1 345 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 NUP50Q9UKX7 468 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 MYBPHLA2RUH7 354 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 MUSKO15146 869 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 PDPK1O15530 556 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 TREHO43280 583 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 LDB2O43679 373 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 NIPSNAP2O75323 286 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 LRATO95237 230 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 RPS3P23396 243 aaKnown RBP eCLIP12.31□□□□□ -0.449e-7■■■■□ 19.6
SMG8-202ENST00000543872 KIR2DL3P43628 341 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 CCDC85BQ15834 202 aaPredicted RBP12.31□□□□□ -0.44
SMG8-202ENST00000543872 TTLQ8NG68 377 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 EEF1AKMT1Q8WVE0 214 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 DIRAS2Q96HU8 199 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 IMPAD1Q9NX62 359 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 MALT1Q9UDY8 824 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 TRMT6Q9UJA5 497 aaKnown RBP12.31□□□□□ -0.44
SMG8-202ENST00000543872 UBQLN1Q9UMX0 589 aaKnown RBP12.31□□□□□ -0.44
SMG8-202ENST00000543872 ZNF831Q5JPB2 1677 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 BTN3A3O00478 584 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 TSPAN19P0C672 248 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 POU2F1P14859 743 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 AQP1P29972 269 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 SOX4Q06945 474 aaPredicted RBP12.31□□□□□ -0.44
SMG8-202ENST00000543872 NFE2L1Q14494 772 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 TATDN3Q17R31 274 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 C5orf22Q49AR2 442 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 MARC1Q5VT66 337 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 KLHL17Q6TDP4 642 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 CATSPERGQ6ZRH7 1159 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 PLEKHM3Q6ZWE6 761 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 PLCZ1Q86YW0 608 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 NLGN4YQ8NFZ3 816 aaPredicted RBP12.31□□□□□ -0.44
SMG8-202ENST00000543872 LINGO1Q96FE5 620 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 DERL2Q9GZP9 239 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 TRIM45Q9H8W5 580 aaPredicted RBP12.31□□□□□ -0.44
SMG8-202ENST00000543872 QTRT2Q9H974 415 aaKnown RBP12.31□□□□□ -0.44
SMG8-202ENST00000543872 AGO3Q9H9G7 860 aaKnown RBP12.31□□□□□ -0.44
SMG8-202ENST00000543872 IL1RAPQ9NPH3 570 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 ZNF224Q9NZL3 707 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 DUSP12Q9UNI6 340 aa12.31□□□□□ -0.44
SMG8-202ENST00000543872 FABP12A6NFH5 140 aa12.3□□□□□ -0.44
SMG8-202ENST00000543872 GABRDO14764 452 aa12.3□□□□□ -0.44
SMG8-202ENST00000543872 CBX5P45973 191 aa12.3□□□□□ -0.44
SMG8-202ENST00000543872 CDKN1CP49918 316 aaPredicted RBP12.3□□□□□ -0.44
SMG8-202ENST00000543872 C6orf132Q5T0Z8 1188 aa12.3□□□□□ -0.44
SMG8-202ENST00000543872 ZNF767PQ75MW2 155 aa12.3□□□□□ -0.44
SMG8-202ENST00000543872 EFHBQ8N7U6 833 aa12.3□□□□□ -0.44
SMG8-202ENST00000543872 WDR36Q8NI36 951 aaKnown RBP12.3□□□□□ -0.44
SMG8-202ENST00000543872 BARHL1Q9BZE3 327 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms