RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 CTSEP14091 401 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 HGFP14210 728 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 ACPPP15309 386 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 HMOX2P30519 316 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 SH3BP2P78314 561 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 CTBSQ01459 385 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 SEMG2Q02383 582 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 CYLC2Q14093 348 aaPredicted RBP11.13□□□□□ -0.63
COPS7A-217ENST00000543537 PTPRRQ15256 657 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 RPS6KA2Q15349 733 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 RBBP7Q16576 425 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 COL28A1Q2UY09 1125 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 LSM12Q3MHD2 195 aaKnown RBP11.13□□□□□ -0.63
COPS7A-217ENST00000543537 COQ5Q5HYK3 327 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 WASHC2DQ5SRD0 308 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 LIPJQ5W064 366 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 RBM44Q6ZP01 1051 aaKnown RBP11.13□□□□□ -0.63
COPS7A-217ENST00000543537 PDZD3Q86UT5 571 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 LRRTM4Q86VH4 590 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 AMZ2Q86W34 360 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 C17orf82Q86X59 251 aaPredicted RBP11.13□□□□□ -0.63
COPS7A-217ENST00000543537 RASGEF1AQ8N9B8 481 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 PCYOX1LQ8NBM8 494 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 METTL6Q8TCB7 284 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 GPBAR1Q8TDU6 330 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 TRPC4APQ8TEL6 797 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 EXT2Q93063 718 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 UBE2E3Q969T4 207 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 REPS1Q96D71 796 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 SLC30A3Q99726 388 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 MIPEPQ99797 713 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 SLC25A23Q9BV35 468 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 LGR4Q9BXB1 951 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 MRPL1Q9BYD6 325 aaKnown RBP11.13□□□□□ -0.63
COPS7A-217ENST00000543537 IPPKQ9H8X2 491 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 ASCL3Q9NQ33 180 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 TRNAU1APQ9NX07 287 aaKnown RBP11.13□□□□□ -0.63
COPS7A-217ENST00000543537 CD84Q9UIB8 345 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 TMPRSS11EQ9UL52 423 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 CNOT6Q9ULM6 557 aaKnown RBP11.13□□□□□ -0.63
COPS7A-217ENST00000543537 SLC17A4Q9Y2C5 497 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 SSUH2Q9Y2M2 353 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 ENTPD2Q9Y5L3 495 aa11.13□□□□□ -0.63
COPS7A-217ENST00000543537 IGSF10Q6WRI0 2623 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 ARHGEF17Q96PE2 2063 aaPredicted RBP11.12□□□□□ -0.63
COPS7A-217ENST00000543537 A0A1W2PNU3 283 aaPredicted RBP11.12□□□□□ -0.63
COPS7A-217ENST00000543537 PRSS38A1L453 326 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 B2RBV5 119 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 SDHDO14521 159 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 NOBOXO60393 691 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 ULK1O75385 1050 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 CLDN9O95484 217 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 SOD1P00441 154 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 CEACAM5P06731 702 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 F7P08709 466 aaPredicted RBP11.12□□□□□ -0.63
COPS7A-217ENST00000543537 T-ENOLP0DO92 83 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 HSD3B1P14060 373 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 GLB1P16278 677 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 HSD3B2P26439 372 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 MAPK1P28482 360 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 ARRB2P32121 409 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 HNF4AP41235 474 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 PDX1P52945 283 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 MXRA7P84157 204 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 CDK3Q00526 305 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 BTKQ06187 659 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 DMPKQ09013 629 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 KLF10Q13118 480 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 LAPTM5Q13571 262 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 BOP1Q14137 746 aaKnown RBP11.12□□□□□ -0.63
COPS7A-217ENST00000543537 NR1D2Q14995 579 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 NAA25Q14CX7 972 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 UGT3A2Q3SY77 523 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 ATP6AP1LQ52LC2 224 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 LARP4Q71RC2 724 aaKnown RBP eCLIP11.12□□□□□ -0.63
COPS7A-217ENST00000543537 ADGRG6Q86SQ4 1221 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 TRAPPC5Q8IUR0 188 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 KYQ8NBH2 561 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 DNAJB8Q8NHS0 232 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 TWIST2Q8WVJ9 160 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 POP5Q969H6 163 aaKnown RBP11.12□□□□□ -0.63
COPS7A-217ENST00000543537 RAD51AP1Q96B01 352 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 FAM136AQ96C01 138 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 LIN37Q96GY3 246 aaPredicted RBP11.12□□□□□ -0.63
COPS7A-217ENST00000543537 PRR11Q96HE9 360 aaPredicted RBP11.12□□□□□ -0.63
COPS7A-217ENST00000543537 CCDC3Q9BQI4 270 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 EBF4Q9BQW3 602 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 TIMM29Q9BSF4 260 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 RAB11FIP5Q9BXF6 653 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 PITHD1Q9GZP4 211 aaPredicted RBP11.12□□□□□ -0.63
COPS7A-217ENST00000543537 TMEM168Q9H0V1 697 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 ZBTB26Q9HCK0 441 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 DNAJC11Q9NVH1 559 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 GALPQ9UBC7 116 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 ADGRE2Q9UHX3 823 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 PRPF19Q9UMS4 504 aaKnown RBP11.12□□□□□ -0.63
COPS7A-217ENST00000543537 DOLKQ9UPQ8 538 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 PDE10AQ9Y233 779 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 TMED5Q9Y3A6 229 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 DNAJC15Q9Y5T4 150 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms