RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 NFE2L1Q14494 772 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 EIF4HQ15056 248 aaKnown RBP15.79■□□□□ 0.12
COL4A1-204ENST00000543140 NADK2Q4G0N4 442 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 CATSPEREQ5SY80 951 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 LRIF1Q5T3J3 769 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 ACSM2BQ68CK6 577 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 GRHL2Q6ISB3 625 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 DOK6Q6PKX4 331 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 ERN2Q76MJ5 926 aaKnown RBP15.79■□□□□ 0.12
COL4A1-204ENST00000543140 MICU2Q8IYU8 434 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 FAM9CQ8IZT9 166 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 PPP1R16AQ96I34 528 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 FBXL20Q96IG2 436 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 ZCCHC2Q9C0B9 1178 aaKnown RBP15.79■□□□□ 0.12
COL4A1-204ENST00000543140 POP7O75817 140 aaKnown RBP15.79■□□□□ 0.12
COL4A1-204ENST00000543140 H6PDO95479 791 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 SNAP29O95721 258 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 P2RY2P41231 377 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 RPS9P46781 194 aaKnown RBP15.79■□□□□ 0.12
COL4A1-204ENST00000543140 ERVK-21P61565 698 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 TBPL1P62380 186 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 CNTN1Q12860 1018 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 DUSP6Q16828 381 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 UGT8Q16880 541 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 VITQ6UXI7 678 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 AADATQ8N5Z0 425 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 C1orf52Q8N6N3 182 aaKnown RBP15.79■□□□□ 0.12
COL4A1-204ENST00000543140 TSPAN14Q8NG11 270 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 OR7G3Q8NG95 312 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 HUS1BQ8NHY5 278 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 MAGEB10Q96LZ2 347 aaPredicted RBP15.79■□□□□ 0.12
COL4A1-204ENST00000543140 SAMD11Q96NU1 681 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 TRIM39Q9HCM9 518 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 PNPLA3Q9NST1 481 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 SPATA6Q9NWH7 488 aaPredicted RBP15.79■□□□□ 0.12
COL4A1-204ENST00000543140 THG1LQ9NWX6 298 aaKnown RBP15.79■□□□□ 0.12
COL4A1-204ENST00000543140 HCN2Q9UL51 889 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 MAN2B2Q9Y2E5 1009 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 KCNE2Q9Y6J6 123 aa15.79■□□□□ 0.12
COL4A1-204ENST00000543140 H0YIV9 168 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 PRKD3O94806 890 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 COX7A2P14406 83 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 PRPS1L1P21108 318 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 FCARP24071 287 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 OPRD1P41143 372 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 HNF4AP41235 474 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 MTHFRP42898 656 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 IST1P53990 364 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 LAPTM5Q13571 262 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 GTF2H3Q13889 308 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 BCL7AQ4VC05 210 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 ATG9BQ674R7 924 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 XKR5Q6UX68 686 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 C2orf73Q8N5S3 287 aaPredicted RBP15.78■□□□□ 0.12
COL4A1-204ENST00000543140 TNIP2Q8NFZ5 429 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 NETO1Q8TDF5 533 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 TMBIM1Q969X1 311 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 EPHX3Q9H6B9 360 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 PRSS16Q9NQE7 514 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 SERTM1A2A2V5 107 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 NPIPB8E9PQR5 432 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 GSTT1P30711 240 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 APOFQ13790 326 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 ZNF551Q7Z340 670 aaPredicted RBP15.78■□□□□ 0.12
COL4A1-204ENST00000543140 OFCC1Q8IZS5 231 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 CXorf40AQ8TE69 158 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 RMND5BQ96G75 393 aaPredicted RBP15.78■□□□□ 0.12
COL4A1-204ENST00000543140 PANX1Q96RD7 426 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 UGT2B28Q9BY64 529 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 SMPD3Q9NY59 655 aaPredicted RBP15.78■□□□□ 0.12
COL4A1-204ENST00000543140 ERVK-11Q9UQG0 969 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 MYRFQ9Y2G1 1151 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 PCDHGA11Q9Y5H2 935 aa15.78■□□□□ 0.12
COL4A1-204ENST00000543140 H3BNH8 94 aa15.77■□□□□ 0.12
COL4A1-204ENST00000543140 UPK1AO00322 258 aa15.77■□□□□ 0.12
COL4A1-204ENST00000543140 FPGTO14772 594 aa15.77■□□□□ 0.12
COL4A1-204ENST00000543140 DEAF1O75398 565 aaPredicted RBP15.77■□□□□ 0.12
COL4A1-204ENST00000543140 CREG1O75629 220 aa15.77■□□□□ 0.12
COL4A1-204ENST00000543140 PAPLNO95428 1278 aa15.77■□□□□ 0.12
COL4A1-204ENST00000543140 CPSF4O95639 269 aaKnown RBP15.77■□□□□ 0.12
COL4A1-204ENST00000543140 CDH15P55291 814 aa15.77■□□□□ 0.12
COL4A1-204ENST00000543140 MEF2AQ02078 507 aaPredicted RBP15.77■□□□□ 0.12
COL4A1-204ENST00000543140 EGFLAMQ63HQ2 1017 aa15.77■□□□□ 0.12
COL4A1-204ENST00000543140 CAPN13Q6MZZ7 669 aaPredicted RBP15.77■□□□□ 0.12
COL4A1-204ENST00000543140 RBM44Q6ZP01 1051 aaKnown RBP15.77■□□□□ 0.12
COL4A1-204ENST00000543140 SLCO4C1Q6ZQN7 724 aa15.77■□□□□ 0.12
COL4A1-204ENST00000543140 FAM83HQ6ZRV2 1179 aaPredicted RBP15.77■□□□□ 0.12
COL4A1-204ENST00000543140 CLECL1Q8IZS7 167 aa15.77■□□□□ 0.12
COL4A1-204ENST00000543140 SLC47A1Q96FL8 570 aa15.77■□□□□ 0.12
COL4A1-204ENST00000543140 OSBPL6Q9BZF3 934 aa15.77■□□□□ 0.12
COL4A1-204ENST00000543140 PLA2G2FQ9BZM2 168 aa15.77■□□□□ 0.12
COL4A1-204ENST00000543140 RUVBL1Q9Y265 456 aaKnown RBP15.77■□□□□ 0.12
COL4A1-204ENST00000543140 BTBD3Q9Y2F9 522 aa15.77■□□□□ 0.12
COL4A1-204ENST00000543140 DOCK8Q8NF50 2099 aa15.77■□□□□ 0.12
COL4A1-204ENST00000543140 YY2O15391 372 aa15.77■□□□□ 0.12
COL4A1-204ENST00000543140 LAMP1P11279 417 aa15.77■□□□□ 0.12
COL4A1-204ENST00000543140 NPPBP16860 134 aa15.77■□□□□ 0.12
COL4A1-204ENST00000543140 HOXB9P17482 250 aaPredicted RBP15.77■□□□□ 0.12
COL4A1-204ENST00000543140 GJA4P35212 333 aa15.77■□□□□ 0.12
COL4A1-204ENST00000543140 GZMMP51124 257 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms