RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 H3BQF6 201 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 DYNC1I1O14576 645 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 PLD2O14939 933 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 CLGNO14967 610 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 SRPX2O60687 465 aaPredicted RBP11.71□□□□□ -0.53
DDX55-210ENST00000543016 H2AFYO75367 372 aaKnown RBP11.71□□□□□ -0.53
DDX55-210ENST00000543016 ZWINTO95229 277 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 TOP3BO95985 862 aaKnown RBP11.71□□□□□ -0.53
DDX55-210ENST00000543016 ADRB1P08588 477 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 SBK3P0C264 359 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 CPA3P15088 417 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 EZRP15311 586 aaKnown RBP11.71□□□□□ -0.53
DDX55-210ENST00000543016 ST6GAL1P15907 406 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 EPB42P16452 691 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 IMPDH1P20839 514 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 MPSTP25325 297 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 LSSP48449 732 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 HSPA7P48741 367 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 DNAJB13P59910 316 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 HERVK_113P63132 956 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 MC2RQ01718 297 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 C16orf72Q14CZ0 275 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 TBCCQ15814 346 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 KIAA1614Q5VZ46 1190 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 ZNF425Q6IV72 752 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 C16orf46Q6P387 395 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 CCDC63Q8NA47 563 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 OR4K1Q8NGD4 311 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 TCP10LQ8TDR4 215 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 PYCR2Q96C36 320 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 SEC16BQ96JE7 1060 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 ATP6V1G3Q96LB4 118 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 TEFMQ96QE5 360 aaKnown RBP11.71□□□□□ -0.53
DDX55-210ENST00000543016 OR4K3Q96R72 315 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 PLCD4Q9BRC7 762 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 DPH7Q9BTV6 452 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 SARGQ9BW04 601 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 ACAT2Q9BWD1 397 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 ERVK-6Q9BXR3 956 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 ASPSCR1Q9BZE9 553 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 ENAMQ9NRM1 1142 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 COPG2Q9UBF2 871 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 EMCNQ9ULC0 261 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 PLCL2Q9UPR0 1127 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 STK38LQ9Y2H1 464 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 LOXL2Q9Y4K0 774 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 ANGPTL3Q9Y5C1 460 aa11.71□□□□□ -0.53
DDX55-210ENST00000543016 KCNE1BA0A087WTH5 132 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 G3V2L1 256 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 CASC3O15234 703 aaKnown RBP11.7□□□□□ -0.54
DDX55-210ENST00000543016 DLX3O60479 287 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 CCNT2O60583 730 aaKnown RBP11.7□□□□□ -0.54
DDX55-210ENST00000543016 UGDHO60701 494 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 JMJD7P0C870 316 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 MAGP20916 626 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 PSMB5P28074 263 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 GSTM2P28161 218 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 CASP2P42575 452 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 GDF5P43026 501 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 SEPHS1P49903 392 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 MAGOHP61326 146 aaKnown RBP11.7□□□□□ -0.54
DDX55-210ENST00000543016 SHC2P98077 582 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 FOXC1Q12948 553 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 GPS2Q13227 327 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 LAPTM5Q13571 262 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 PAGE2BQ5JRK9 111 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 TMEM164Q5U3C3 297 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 ATG9BQ674R7 924 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 NXPE4Q6UWF7 544 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 TRIM73Q86UV7 250 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 PAQR7Q86WK9 346 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 DNAJC22Q8N4W6 341 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 SNX31Q8N9S9 440 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 RCBTB1Q8NDN9 531 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 UBE2E3Q969T4 207 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 PHF21BQ96EK2 531 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 L3HYPDHQ96EM0 354 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 WDR34Q96EX3 536 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 AIF1LQ9BQI0 150 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 EFCAB11Q9BUY7 163 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 DDA1Q9BW61 102 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 NT5DC2Q9H857 520 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 POLR1BQ9H9Y6 1135 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 OXSMQ9NWU1 459 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 SIDT1Q9NXL6 827 aaKnown RBP11.7□□□□□ -0.54
DDX55-210ENST00000543016 SERTAD3Q9UJW9 196 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 WASF3Q9UPY6 502 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 MSRB2Q9Y3D2 182 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 PCDHGA3Q9Y5H0 932 aa11.7□□□□□ -0.54
DDX55-210ENST00000543016 EFCAB7A8K855 629 aa11.69□□□□□ -0.54
DDX55-210ENST00000543016 H7BY64 318 aa11.69□□□□□ -0.54
DDX55-210ENST00000543016 E2F3O00716 465 aa11.69□□□□□ -0.54
DDX55-210ENST00000543016 TXNDC9O14530 226 aa11.69□□□□□ -0.54
DDX55-210ENST00000543016 POLR1CO15160 346 aaPredicted RBP11.69□□□□□ -0.54
DDX55-210ENST00000543016 BIRC5O15392 142 aa11.69□□□□□ -0.54
DDX55-210ENST00000543016 HYAL3O43820 417 aaPredicted RBP11.69□□□□□ -0.54
DDX55-210ENST00000543016 TRIM13O60858 407 aa11.69□□□□□ -0.54
DDX55-210ENST00000543016 SPAG7O75391 227 aa11.69□□□□□ -0.54
DDX55-210ENST00000543016 DXOO77932 396 aaKnown RBP11.69□□□□□ -0.54
DDX55-210ENST00000543016 MLYCDO95822 493 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms