RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 MOSPD3O75425 235 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 SEC14L2O76054 403 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 TIMP1P01033 207 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 ITGAMP11215 1152 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 ITPKAP23677 461 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 CRHBPP24387 322 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 MAP4P27816 1152 aaKnown RBP6.35□□□□□ -1.39
PTPRO-208ENST00000542557 ELK4P28324 431 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 PRLHRP49683 370 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 VEGFBP49765 207 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 PNLIPRP1P54315 467 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 RAD23AP54725 363 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 EMP3P54852 163 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 UGT8Q16880 541 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 ZNF284Q2VY69 593 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 ZIK1Q3SY52 487 aaPredicted RBP6.35□□□□□ -1.39
PTPRO-208ENST00000542557 SLC44A4Q53GD3 710 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.35□□□□□ -1.39
PTPRO-208ENST00000542557 LRRC73Q5JTD7 316 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 C1QTNF12Q5T7M4 302 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 CPZQ66K79 652 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 GRHL2Q6ISB3 625 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 SHQ1Q6PI26 577 aaKnown RBP6.35□□□□□ -1.39
PTPRO-208ENST00000542557 SPESP1Q6UW49 350 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 CAMKMTQ7Z624 323 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 SYT12Q8IV01 421 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 CHPFQ8IZ52 775 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 CHDHQ8NE62 594 aaPredicted RBP6.35□□□□□ -1.39
PTPRO-208ENST00000542557 NETO1Q8TDF5 533 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 SCAMP4Q969E2 229 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 C11orf24Q96F05 449 aaPredicted RBP6.35□□□□□ -1.39
PTPRO-208ENST00000542557 MAGED4Q96JG8 741 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 CCDC138Q96M89 665 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.35□□□□□ -1.39
PTPRO-208ENST00000542557 AMBRA1Q9C0C7 1298 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 REXO4Q9GZR2 422 aaKnown RBP6.35□□□□□ -1.39
PTPRO-208ENST00000542557 OCEL1Q9H607 264 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 BRF2Q9HAW0 419 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 TDP1Q9NUW8 608 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 GPRC5BQ9NZH0 403 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 VPS29Q9UBQ0 182 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 UTS2RQ9UKP6 389 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 ACAD8Q9UKU7 415 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 CDC14AQ9UNH5 594 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 MAGED1Q9Y5V3 778 aaPredicted RBP6.35□□□□□ -1.39
PTPRO-208ENST00000542557 SLC5A10A0PJK1 596 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 FADS2P1A8MWK0 482 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 NOL3O60936 208 aaKnown RBP6.34□□□□□ -1.39
PTPRO-208ENST00000542557 SCN2BO60939 215 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 LEFTY1O75610 366 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 DNAJB5O75953 348 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 CATP04040 527 aaKnown RBP6.34□□□□□ -1.39
PTPRO-208ENST00000542557 SEMG1P04279 462 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 CSF2RAP15509 400 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 TIMP2P16035 220 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 GPX2P18283 190 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 POLR2EP19388 210 aaKnown RBP6.34□□□□□ -1.39
PTPRO-208ENST00000542557 CD22P20273 847 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 GSTM2P28161 218 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 CTHP32929 405 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 IST1P53990 364 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 TMBIM6P55061 237 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 WNT3P56703 355 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 HTRA4P83105 476 aaPredicted RBP6.34□□□□□ -1.39
PTPRO-208ENST00000542557 VAC14Q08AM6 782 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 KCNAB2Q13303 367 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 TEAD2Q15562 447 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 PGS1Q32NB8 556 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 SYTL3Q4VX76 610 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 ZNF691Q5VV52 312 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 TMEM215Q68D42 235 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 OR4F3Q6IEY1 312 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 CES5AQ6NT32 575 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 ZNF551Q7Z340 670 aaPredicted RBP6.34□□□□□ -1.39
PTPRO-208ENST00000542557 TECPR1Q7Z6L1 1165 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 THOC6Q86W42 341 aaKnown RBP6.34□□□□□ -1.39
PTPRO-208ENST00000542557 FBXO15Q8NCQ5 510 aaPredicted RBP6.34□□□□□ -1.39
PTPRO-208ENST00000542557 FBLIM1Q8WUP2 373 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 BTN2A2Q8WVV5 523 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 ZNF566Q969W8 418 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 NRBF2Q96F24 287 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 PHF12Q96QT6 1004 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 ATG10Q9H0Y0 220 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 LIN28AQ9H9Z2 209 aaKnown RBP6.34□□□□□ -1.39
PTPRO-208ENST00000542557 SMURF2Q9HAU4 748 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 HCFC1R1Q9NWW0 138 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 TMEFF2Q9UIK5 374 aaPredicted RBP6.34□□□□□ -1.39
PTPRO-208ENST00000542557 NAALAD2Q9Y3Q0 740 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 PCDHGA8Q9Y5G5 932 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 MAGEB17A8MXT2 336 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 PSMD11O00231 422 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 DPM1O60762 260 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 ATG13O75143 517 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 MTX2O75431 263 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 E2F6O75461 281 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 EPN2O95208 641 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 GSNP06396 782 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 RYKP34925 604 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 PIGAP37287 484 aa6.34□□□□□ -1.39
PTPRO-208ENST00000542557 NNMTP40261 264 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms