RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 NPHS1O60500 1241 aa22.23■■□□□ 1.15
HOMER3-205ENST00000542541 OTCP00480 354 aa22.23■■□□□ 1.15
HOMER3-205ENST00000542541 SERPINE1P05121 402 aa22.23■■□□□ 1.15
HOMER3-205ENST00000542541 CDH1P12830 882 aa22.23■■□□□ 1.15
HOMER3-205ENST00000542541 GRIA3P42263 894 aa22.23■■□□□ 1.15
HOMER3-205ENST00000542541 CCR8P51685 355 aa22.23■■□□□ 1.15
HOMER3-205ENST00000542541 IRF8Q02556 426 aa22.23■■□□□ 1.15
HOMER3-205ENST00000542541 RBBP7Q16576 425 aa22.23■■□□□ 1.15
HOMER3-205ENST00000542541 SNAP47Q5SQN1 464 aa22.23■■□□□ 1.15
HOMER3-205ENST00000542541 NXPE4Q6UWF7 544 aa22.23■■□□□ 1.15
HOMER3-205ENST00000542541 ZNF574Q6ZN55 896 aaPredicted RBP22.23■■□□□ 1.15
HOMER3-205ENST00000542541 FRMD7Q6ZUT3 714 aa22.23■■□□□ 1.15
HOMER3-205ENST00000542541 SLCO6A1Q86UG4 719 aa22.23■■□□□ 1.15
HOMER3-205ENST00000542541 TRIM73Q86UV7 250 aa22.23■■□□□ 1.15
HOMER3-205ENST00000542541 KMT5CQ86Y97 462 aa22.23■■□□□ 1.15
HOMER3-205ENST00000542541 FAM20CQ8IXL6 584 aa22.23■■□□□ 1.15
HOMER3-205ENST00000542541 TMEM74Q96NL1 305 aa22.23■■□□□ 1.15
HOMER3-205ENST00000542541 GSTO2Q9H4Y5 243 aa22.23■■□□□ 1.15
HOMER3-205ENST00000542541 ACTR8Q9H981 624 aa22.23■■□□□ 1.15
HOMER3-205ENST00000542541 PELI2Q9HAT8 420 aa22.23■■□□□ 1.15
HOMER3-205ENST00000542541 ZBTB26Q9HCK0 441 aa22.23■■□□□ 1.15
HOMER3-205ENST00000542541 TMEM9Q9P0T7 183 aa22.23■■□□□ 1.15
HOMER3-205ENST00000542541 SEMA5BQ9P283 1151 aa22.23■■□□□ 1.15
HOMER3-205ENST00000542541 TMX2-CTNND1H3BSU7 103 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 H7BY64 318 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 KIF1CO43896 1103 aaKnown RBP22.22■■□□□ 1.15
HOMER3-205ENST00000542541 DKK1O94907 266 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 ZBTB11O95625 1053 aaPredicted RBP22.22■■□□□ 1.15
HOMER3-205ENST00000542541 C1GALT1C1LP0DN25 315 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 MAGP20916 626 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 CXCR2P25025 360 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 MPSTP25325 297 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 GRK3P35626 688 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 ARL1P40616 181 aaPredicted RBP22.22■■□□□ 1.15
HOMER3-205ENST00000542541 LSSP48449 732 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 CCNG1P51959 295 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 LCP2Q13094 533 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 CHIT1Q13231 466 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 TRA2AQ13595 282 aaKnown RBP eCLIP22.22■■□□□ 1.15
HOMER3-205ENST00000542541 TBCCQ15814 346 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 XKR6Q5GH73 641 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 ATG9BQ674R7 924 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 ATG16L1Q676U5 607 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 FIGLAQ6QHK4 219 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 SLCO4C1Q6ZQN7 724 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 ADCK2Q7Z695 626 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 TMPRSS11BQ86T26 416 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 OR6Y1Q8NGX8 325 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 TRPC4APQ8TEL6 797 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 MAGEB10Q96LZ2 347 aaPredicted RBP22.22■■□□□ 1.15
HOMER3-205ENST00000542541 PPM1MQ96MI6 270 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 PRAP1Q96NZ9 151 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 TRAPPC9Q96Q05 1148 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 NTMT1Q9BV86 223 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 EML4Q9HC35 981 aaKnown RBP22.22■■□□□ 1.15
HOMER3-205ENST00000542541 SH2B3Q9UQQ2 575 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 UNC13CQ8NB66 2214 aa22.22■■□□□ 1.15
HOMER3-205ENST00000542541 IGHV5-10-1A0A0J9YXX1 117 aa22.21■■□□□ 1.15
HOMER3-205ENST00000542541 SLC9B1P1A6NJY1 282 aa22.21■■□□□ 1.15
HOMER3-205ENST00000542541 E7EQ34 232 aa22.21■■□□□ 1.15
HOMER3-205ENST00000542541 UGDHO60701 494 aa22.21■■□□□ 1.15
HOMER3-205ENST00000542541 KCNK5O95279 499 aa22.21■■□□□ 1.15
HOMER3-205ENST00000542541 ANKRD34CP0C6C1 535 aa22.21■■□□□ 1.15
HOMER3-205ENST00000542541 THRAP10827 490 aa22.21■■□□□ 1.15
HOMER3-205ENST00000542541 EPORP19235 508 aa22.21■■□□□ 1.15
HOMER3-205ENST00000542541 BGNP21810 368 aa22.21■■□□□ 1.15
HOMER3-205ENST00000542541 CASP2P42575 452 aa22.21■■□□□ 1.15
HOMER3-205ENST00000542541 ARL4DP49703 201 aa22.21■■□□□ 1.15
HOMER3-205ENST00000542541 YBX1P67809 324 aaKnown RBP22.21■■□□□ 1.15
HOMER3-205ENST00000542541 INSM1Q01101 510 aaPredicted RBP22.21■■□□□ 1.15
HOMER3-205ENST00000542541 STX3Q13277 289 aa22.21■■□□□ 1.15
HOMER3-205ENST00000542541 CATSPEREQ5SY80 951 aa22.21■■□□□ 1.15
HOMER3-205ENST00000542541 ZCCHC23Q6ZST2 131 aa22.21■■□□□ 1.15
HOMER3-205ENST00000542541 RPS27LQ71UM5 84 aaKnown RBP22.21■■□□□ 1.15
HOMER3-205ENST00000542541 TMPRSS9Q7Z410 1059 aa22.21■■□□□ 1.15
HOMER3-205ENST00000542541 MOCOSQ96EN8 888 aa22.21■■□□□ 1.15
HOMER3-205ENST00000542541 PTCD3Q96EY7 689 aaKnown RBP22.21■■□□□ 1.15
HOMER3-205ENST00000542541 TCTN2Q96GX1 697 aa22.21■■□□□ 1.15
HOMER3-205ENST00000542541 PLCD4Q9BRC7 762 aa22.21■■□□□ 1.15
HOMER3-205ENST00000542541 EFCAB11Q9BUY7 163 aa22.21■■□□□ 1.15
HOMER3-205ENST00000542541 DRC3Q9H069 523 aa22.21■■□□□ 1.15
HOMER3-205ENST00000542541 MANSC1Q9H8J5 431 aa22.21■■□□□ 1.15
HOMER3-205ENST00000542541 SLC6A20Q9NP91 592 aa22.21■■□□□ 1.15
HOMER3-205ENST00000542541 ACSS2Q9NR19 701 aa22.21■■□□□ 1.15
HOMER3-205ENST00000542541 CUEDC1Q9NWM3 386 aaPredicted RBP22.21■■□□□ 1.15
HOMER3-205ENST00000542541 A8MU76 341 aa22.2■■□□□ 1.15
HOMER3-205ENST00000542541 TMEM114B3SHH9 223 aa22.2■■□□□ 1.15
HOMER3-205ENST00000542541 SNUPNO95149 360 aaKnown RBP22.2■■□□□ 1.15
HOMER3-205ENST00000542541 PVRP15151 417 aa22.2■■□□□ 1.15
HOMER3-205ENST00000542541 ST6GAL1P15907 406 aa22.2■■□□□ 1.15
HOMER3-205ENST00000542541 PKNOX1P55347 436 aa22.2■■□□□ 1.15
HOMER3-205ENST00000542541 RELAQ04206 551 aa22.2■■□□□ 1.15
HOMER3-205ENST00000542541 GALNT1Q10472 559 aaPredicted RBP22.2■■□□□ 1.15
HOMER3-205ENST00000542541 LAPTM5Q13571 262 aa22.2■■□□□ 1.15
HOMER3-205ENST00000542541 RCN2Q14257 317 aa22.2■■□□□ 1.15
HOMER3-205ENST00000542541 PAGE2BQ5JRK9 111 aa22.2■■□□□ 1.15
HOMER3-205ENST00000542541 LIPJQ5W064 366 aa22.2■■□□□ 1.15
HOMER3-205ENST00000542541 DHRS13Q6UX07 377 aa22.2■■□□□ 1.15
HOMER3-205ENST00000542541 MILR1Q7Z6M3 343 aa22.2■■□□□ 1.15
HOMER3-205ENST00000542541 SLITRK4Q8IW52 837 aa22.2■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms