RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 LATS1O95835 1130 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 MT-CO1P00395 513 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 AHSGP02765 367 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 IRF1P10914 325 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 BMP2P12643 396 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 CR2P20023 1033 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 SLC1A2P43004 574 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 RGRP47804 291 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 GRIA4P48058 902 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 NUMBP49757 651 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 DIO1P49895 249 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 SERPINH1P50454 418 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 SLC7A2P52569 658 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 EPHB3P54753 998 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 NAGLUP54802 743 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 GRM3Q14832 879 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 VEPH1Q14D04 833 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 KIAA0408Q6ZU52 694 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 GAREM2Q75VX8 874 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 ERMP1Q7Z2K6 904 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 ADCK1Q86TW2 530 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 ARMC8Q8IUR7 673 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 DENND6AQ8IWF6 608 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 CBARPQ8N350 705 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 ASCC1Q8N9N2 400 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 C2CD4AQ8NCU7 369 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 RPL10LQ96L21 214 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 DACH2Q96NX9 599 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 POLR1EQ9GZS1 481 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 CCDC90BQ9GZT6 254 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 RHOJQ9H4E5 214 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 GORASP2Q9H8Y8 452 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 POLR3BQ9NW08 1133 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 NSMCE4AQ9NXX6 385 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 CAB39Q9Y376 341 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 UGT2A1Q9Y4X1 527 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 ACOX3O15254 700 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 LDB2O43679 373 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 PSIP1O75475 530 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 SERPINI2O75830 405 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 RBBP9O75884 186 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 PAPSS2O95340 614 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 IL6P05231 212 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 MBL2P11226 248 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 SYN1P17600 705 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 ATP6V1B2P21281 511 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 PTX3P26022 381 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 TALDO1P37837 337 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 HLCSP50747 726 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 MPP1Q00013 466 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 CREMQ03060 361 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 CDKL4Q5MAI5 379 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 TSTD2Q5T7W7 516 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 BROXQ5VW32 411 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 TMEM236Q5W0B7 351 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 DDIASQ8IXT1 998 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 SFRP1Q8N474 314 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 TMEM151AQ8N4L1 468 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 POC5Q8NA72 575 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 MINDY2Q8NBR6 621 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 SP7Q8TDD2 431 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 TP53INP1Q96A56 240 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 ZUFSPQ96AP4 578 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 ZFYVE19Q96K21 471 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 SEMA3CQ99985 751 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 FUNDC2Q9BWH2 189 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 PRKD2Q9BZL6 878 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 MAGEE1Q9HCI5 957 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 SPAG4Q9NPE6 437 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 BOLA1Q9Y3E2 137 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 OR51B4Q9Y5P0 310 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 TCRBV3S1A0A5B6 114 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 TARM1B6A8C7 271 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 RRP8O43159 456 aaKnown RBP7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 TSPAN3O60637 253 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 CCNKO75909 580 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 BMP4P12644 408 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 FASP25445 335 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 CAPGP40121 348 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 CASP9P55211 416 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 ACVR1Q04771 509 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 UBE3AQ05086 875 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 ITKQ08881 620 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 DUSP7Q16829 419 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 IMPG1Q17R60 797 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 IQCCQ4KMZ1 466 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 CCNYL2Q5T2Q4 361 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 TXNDC8Q6A555 127 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 ZNF773Q6PK81 442 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 SLC16A12Q6ZSM3 486 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 AFAP1L2Q8N4X5 818 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 OR2T34Q8NGX1 318 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 OR2T3Q8NH03 318 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 CITED4Q96RK1 184 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 C12orf57Q99622 126 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 TMEM168Q9H0V1 697 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 DIABLOQ9NR28 239 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 SEMA3GQ9NS98 782 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 SMPD4Q9NXE4 827 aa7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 RAP2CQ9Y3L5 183 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms