RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 PRICKLE1Q96MT3 831 aaPredicted RBP15.65■□□□□ 0.1
VARS2-212ENST00000542001 LTB4R2Q9NPC1 389 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 CLN6Q9NWW5 311 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 RUVBL1Q9Y265 456 aaKnown RBP15.65■□□□□ 0.1
VARS2-212ENST00000542001 ERGIC3Q9Y282 383 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 DENRO43583 198 aaKnown RBP15.65■□□□□ 0.1
VARS2-212ENST00000542001 C8orf89P0DMQ9 161 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 GRIA2P42262 883 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 GCNT6Q5T4J0 391 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 ATAD3BQ5T9A4 648 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 ADGRG5Q8IZF4 528 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 GPR26Q8NDV2 337 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 WBP2Q969T9 261 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 HTATIP2Q9BUP3 242 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 CCDC177Q9NQR7 707 aaPredicted RBP15.65■□□□□ 0.1
VARS2-212ENST00000542001 SEMA3GQ9NS98 782 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 KLHL28Q9NXS3 571 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 GPRC5BQ9NZH0 403 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 GSAPA4D1B5 854 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 SNX4O95219 450 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 RYKP34925 604 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 ARMCX4Q5H9R4 360 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 FOXB2Q5VYV0 432 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 KANK2Q63ZY3 851 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 ZNF57Q68EA5 555 aaPredicted RBP15.65■□□□□ 0.1
VARS2-212ENST00000542001 RNF111Q6ZNA4 994 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 C16orf62Q7Z3J2 963 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 KRT73Q86Y46 540 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 OR14C36Q8NHC7 312 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 ZCCHC10Q8TBK6 192 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 RNF31Q96EP0 1072 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 SLC39A13Q96H72 371 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 SLC35A5Q9BS91 424 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 HDHD2Q9H0R4 259 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 TUBB1Q9H4B7 451 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 LOC285095A0A1B0GVY8 99 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 POP7O75817 140 aaKnown RBP15.64■□□□□ 0.09
VARS2-212ENST00000542001 KRT75O95678 551 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 C6orf47O95873 294 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 CLEC12AQ5QGZ9 265 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.64■□□□□ 0.09
VARS2-212ENST00000542001 TICAM1Q8IUC6 712 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 GHDCQ8N2G8 530 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 KLHL23Q8NBE8 558 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 NFKBIDQ8NI38 313 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 LKAAEAR1Q8TD35 194 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 L3HYPDHQ96EM0 354 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 PAWRQ96IZ0 340 aaKnown RBP15.64■□□□□ 0.09
VARS2-212ENST00000542001 MGME1Q9BQP7 344 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 GPATCH1Q9BRR8 931 aaKnown RBP15.64■□□□□ 0.09
VARS2-212ENST00000542001 CD320Q9NPF0 282 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 TVP23BQ9NYZ1 205 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 TMEM181Q9P2C4 612 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 BTBD3Q9Y2F9 522 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 PRSS51A0A1B0GVH4 220 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 TTC34A8MYJ7 566 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 TMCC2O75069 709 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 C8GP07360 202 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 PRPS1L1P21108 318 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 FBXW4P57775 412 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 ARF5P84085 180 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 ANXA8L1Q5VT79 327 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 LGI4Q8N135 537 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 SLC43A3Q8NBI5 491 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 JPH3Q8WXH2 748 aaPredicted RBP15.64■□□□□ 0.09
VARS2-212ENST00000542001 MYDGFQ969H8 173 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 ZUFSPQ96AP4 578 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 COL21A1Q96P44 957 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 RMI1Q9H9A7 625 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 RAD18Q9NS91 495 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 TDP1Q9NUW8 608 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 THUMPD1Q9NXG2 353 aaKnown RBP15.64■□□□□ 0.09
VARS2-212ENST00000542001 FNIP2Q9P278 1114 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 ERVK-18Q9QC07 812 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 TAC3Q9UHF0 121 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 A0A1W2PRB8 838 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 KLHL33A6NCF5 533 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 ZNF99A8MXY4 864 aaPredicted RBP15.64■□□□□ 0.09
VARS2-212ENST00000542001 FGF18O76093 207 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 B3GALT4O96024 378 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 TACR1P25103 407 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 PCSK6P29122 969 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 PROKR1Q8TCW9 393 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 NETO1Q8TDF5 533 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 TOP1MTQ969P6 601 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 ATG2BQ96BY7 2078 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 PYURFQ96I23 114 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 XKR8Q9H6D3 395 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 DLGAP4Q9Y2H0 992 aa15.64■□□□□ 0.09
VARS2-212ENST00000542001 CLDN25C9JDP6 229 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 UGT2B11O75310 529 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 IFNW1P05000 195 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 NTSP30990 170 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 GSTM5P46439 218 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 DMPKQ09013 629 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 ARMC6Q6NXE6 501 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 ZFAND4Q86XD8 727 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 OR10G2Q8NGC3 310 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 OR2T11Q8NH01 316 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 PHF21AQ96BD5 680 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms