RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 ADPRHP54922 357 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 AIF1P55008 147 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 BASP1P80723 227 aaKnown RBP5.34□□□□□ -1.55
DDB1-219ENST00000541513 SPOCK1Q08629 439 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 KRT31Q15323 416 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 KCNA10Q16322 511 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 LY6KQ17RY6 165 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 KIF19Q2TAC6 998 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 SMTNL2Q2TAL5 461 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 DEFB115Q30KQ5 88 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 PLEKHN1Q494U1 663 aaPredicted RBP5.34□□□□□ -1.55
DDB1-219ENST00000541513 NKAIN1Q4KMZ8 207 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 BCL7AQ4VC05 210 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 LCE1DQ5T752 114 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 PDPK2PQ6A1A2 396 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 PMF1Q6P1K2 205 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 B3GLCTQ6Y288 498 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 TMEM179Q6ZVK1 233 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 ALYREFQ86V81 257 aaKnown RBP5.34□□□□□ -1.55
DDB1-219ENST00000541513 TDRPQ86YL5 185 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 TBC1D10CQ8IV04 446 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 AQP12AQ8IXF9 295 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 ZDHHC23Q8IYP9 409 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 NSUN7Q8NE18 718 aaKnown RBP5.34□□□□□ -1.55
DDB1-219ENST00000541513 STKLD1Q8NE28 680 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 SLC22A8Q8TCC7 542 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 SLC26A7Q8TE54 656 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 ZNF483Q8TF39 744 aaPredicted RBP5.34□□□□□ -1.55
DDB1-219ENST00000541513 GDPD5Q8WTR4 605 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 ATG4AQ8WYN0 398 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 STARD8Q92502 1023 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 NCLNQ969V3 563 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 ESAMQ96AP7 390 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 CTHRC1Q96CG8 243 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 C16orf58Q96GQ5 468 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 HRASLS5Q96KN8 279 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 PNKPQ96T60 521 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 PCYT2Q99447 389 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 TMEM47Q9BQJ4 181 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 NMNAT2Q9BZQ4 307 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 OR10A2Q9H208 303 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 BCAS3Q9H6U6 928 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 FAM207AQ9NSI2 230 aaPredicted RBP5.34□□□□□ -1.55
DDB1-219ENST00000541513 ETNK2Q9NVF9 386 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 SLAMF8Q9P0V8 285 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 SERTAD3Q9UJW9 196 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 KIAA1257Q9ULG3 409 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 ABT1Q9ULW3 272 aaKnown RBP5.34□□□□□ -1.55
DDB1-219ENST00000541513 ZDHHC9Q9Y397 364 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 PMF1-BGLAPU3KQ54 211 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 DOCK3Q8IZD9 2030 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 RLFQ13129 1914 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 NEDD4P46934 1319 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 PHLPP2Q6ZVD8 1323 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 WDR33Q9C0J8 1336 aaKnown RBP5.33□□□□□ -1.56
DDB1-219ENST00000541513 COL11A1P12107 1806 aaPredicted RBP5.33□□□□□ -1.56
DDB1-219ENST00000541513 IGKV6D-41A0A0C4DH26 115 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 MACROD2A1Z1Q3 448 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 TMEM247A6NEH6 219 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 SPECC1L-ADORA2AF8WAN1 911 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 STMND1H3BQB6 276 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 ABLIM1O14639 778 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 NDUFS4O43181 175 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 SPRY2O43597 315 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 KCNJ13O60928 360 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 ATP9AO75110 1047 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 CSO75390 466 aaKnown RBP5.33□□□□□ -1.56
DDB1-219ENST00000541513 ERN1O75460 977 aaKnown RBP5.33□□□□□ -1.56
DDB1-219ENST00000541513 RAD51DO75771 328 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 CYP7B1O75881 506 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 KDM4BO94953 1096 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 SERPINA3P01011 423 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 GH2P01242 217 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 CHRNA1P02708 482 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 SPP1P10451 314 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 UGT1A6P19224 532 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 ITGA3P26006 1051 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 NUP62P37198 522 aaPredicted RBP5.33□□□□□ -1.56
DDB1-219ENST00000541513 CETN2P41208 172 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 NOVP48745 357 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 STARP49675 285 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 ASCL1P50553 236 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 ANXA11P50995 505 aaKnown RBP5.33□□□□□ -1.56
DDB1-219ENST00000541513 RPL23AP62750 156 aaKnown RBP5.33□□□□□ -1.56
DDB1-219ENST00000541513 JAG1P78504 1218 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 HSF2Q03933 536 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 PTPAQ15257 358 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 LBHQ53QV2 105 aaPredicted RBP5.33□□□□□ -1.56
DDB1-219ENST00000541513 AGBL4Q5VU57 503 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 C8orf74Q6P047 294 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 FBXO46Q6PJ61 603 aaPredicted RBP5.33□□□□□ -1.56
DDB1-219ENST00000541513 ENPP7Q6UWV6 458 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 LINC00114Q6XXX2 140 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 QSOX2Q6ZRP7 698 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 HTR3DQ70Z44 454 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 TRILQ7L0X0 811 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 FAM228AQ86W67 206 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 ZNF444Q8N0Y2 327 aaPredicted RBP5.33□□□□□ -1.56
DDB1-219ENST00000541513 FBXO39Q8N4B4 442 aa5.33□□□□□ -1.56
DDB1-219ENST00000541513 TTC9BQ8N6N2 239 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms