RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 MSANTD1Q6ZTZ1 278 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 LRRC70Q7Z2Q7 622 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 RNF180Q86T96 592 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 NPAS4Q8IUM7 802 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 OR6Q1Q8NGQ2 317 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 ASB11Q8WXH4 323 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 RPL3LQ92901 407 aaKnown RBP9.25□□□□□ -0.93
CNOT4-212ENST00000541284 NCLNQ969V3 563 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 TOX2Q96NM4 488 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 SLC12A9Q9BXP2 914 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 NACA2Q9H009 215 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 IL21Q9HBE4 155 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 ACOT13Q9NPJ3 140 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 NECTIN3Q9NQS3 549 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 TMEM184CQ9NVA4 438 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 KIAA1522Q9P206 1035 aaPredicted RBP9.25□□□□□ -0.93
CNOT4-212ENST00000541284 AFF4Q9UHB7 1163 aaKnown RBP9.25□□□□□ -0.93
CNOT4-212ENST00000541284 BLOC1S6Q9UL45 172 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 YIPF1Q9Y548 306 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 PCDHB7Q9Y5E2 793 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 HSPE1-MOB4S4R3N1 261 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 CXorf51AA0A1B0GTR3 108 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 OR2A25A4D2G3 310 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 A8MX80 341 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 PCDHGA12O60330 932 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 SOCS5O75159 536 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 CBSLP0DN79 551 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 S100A3P33764 101 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 CBSP35520 551 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 TUFMP49411 452 aaKnown RBP9.25□□□□□ -0.93
CNOT4-212ENST00000541284 FPGSQ05932 587 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 ELAVL2Q12926 359 aaKnown RBP9.25□□□□□ -0.93
CNOT4-212ENST00000541284 CLCA4Q14CN2 919 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 PRSS36Q5K4E3 855 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 LYPLAL1Q5VWZ2 237 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 TMEM236Q5W0B7 351 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 UBE2Q1Q7Z7E8 422 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 TMEM132CQ8N3T6 1108 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 SYNPOQ8N3V7 929 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 OR7A2PQ8NGA2 310 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 DACH2Q96NX9 599 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 TRNAU1APQ9NX07 287 aaKnown RBP9.25□□□□□ -0.93
CNOT4-212ENST00000541284 TRPM5Q9NZQ8 1165 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 OSGIN1Q9UJX0 560 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 NUP214P35658 2090 aaPredicted RBP9.25□□□□□ -0.93
CNOT4-212ENST00000541284 C1orf226A1L170 272 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 UPK3BL1B0FP48 263 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 UPK3BL2E5RIL1 263 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 GFYI3L273 518 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 GNGT2O14610 69 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 LRATO95237 230 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 EFNA1P20827 205 aaPredicted RBP9.25□□□□□ -0.93
CNOT4-212ENST00000541284 MAGEA10P43363 369 aaPredicted RBP9.25□□□□□ -0.93
CNOT4-212ENST00000541284 RPIAP49247 311 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 PFN3P60673 137 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 VBP1P61758 197 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 NCS1P62166 190 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 IL5RAQ01344 420 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 ARHGEF7Q14155 803 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 ZNF846Q147U1 533 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 VMACQ2NL98 169 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 INAVAQ3KP66 663 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 NOXRED1Q6NXP6 359 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 CBLL1Q75N03 491 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 PRSS48Q7RTY5 328 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 WDR20Q8TBZ3 569 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 PHF10Q8WUB8 498 aaKnown RBP9.25□□□□□ -0.93
CNOT4-212ENST00000541284 P2RY13Q9BPV8 354 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 DPH2Q9BQC3 489 aaPredicted RBP9.25□□□□□ -0.93
CNOT4-212ENST00000541284 REXO4Q9GZR2 422 aaKnown RBP9.25□□□□□ -0.93
CNOT4-212ENST00000541284 ABCG8Q9H221 673 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 AASDHPPTQ9NRN7 309 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 KCTD5Q9NXV2 234 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 WARS2Q9UGM6 360 aaKnown RBP9.25□□□□□ -0.93
CNOT4-212ENST00000541284 ANGPTL3Q9Y5C1 460 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 hCG_2039718K7EN88 272 aa9.24□□□□□ -0.93
CNOT4-212ENST00000541284 SLC22A1O15245 554 aa9.24□□□□□ -0.93
CNOT4-212ENST00000541284 NUAK1O60285 661 aa9.24□□□□□ -0.93
CNOT4-212ENST00000541284 GMNNO75496 209 aa9.24□□□□□ -0.93
CNOT4-212ENST00000541284 C1SP09871 688 aa9.24□□□□□ -0.93
CNOT4-212ENST00000541284 TPP2P29144 1249 aaPredicted RBP9.24□□□□□ -0.93
CNOT4-212ENST00000541284 RAE1P78406 368 aaKnown RBP9.24□□□□□ -0.93
CNOT4-212ENST00000541284 SMAD3P84022 425 aaKnown RBP9.24□□□□□ -0.93
CNOT4-212ENST00000541284 SFSWAPQ12872 951 aaKnown RBP9.24□□□□□ -0.93
CNOT4-212ENST00000541284 PTCHD3Q3KNS1 767 aa9.24□□□□□ -0.93
CNOT4-212ENST00000541284 TTC23LQ6PF05 361 aa9.24□□□□□ -0.93
CNOT4-212ENST00000541284 SLCO6A1Q86UG4 719 aa9.24□□□□□ -0.93
CNOT4-212ENST00000541284 CADM3Q8N126 398 aa9.24□□□□□ -0.93
CNOT4-212ENST00000541284 HJURPQ8NCD3 748 aaPredicted RBP9.24□□□□□ -0.93
CNOT4-212ENST00000541284 TTC16Q8NEE8 873 aa9.24□□□□□ -0.93
CNOT4-212ENST00000541284 SELENOMQ8WWX9 145 aa9.24□□□□□ -0.93
CNOT4-212ENST00000541284 MCCC1Q96RQ3 725 aaPredicted RBP9.24□□□□□ -0.93
CNOT4-212ENST00000541284 PARVBQ9HBI1 364 aa9.24□□□□□ -0.93
CNOT4-212ENST00000541284 FKBP14Q9NWM8 211 aa9.24□□□□□ -0.93
CNOT4-212ENST00000541284 ZDHHC3Q9NYG2 299 aa9.24□□□□□ -0.93
CNOT4-212ENST00000541284 PRAMEF25A6NGN4 478 aa9.24□□□□□ -0.93
CNOT4-212ENST00000541284 DPM1O60762 260 aa9.24□□□□□ -0.93
CNOT4-212ENST00000541284 KRT6AP02538 564 aa9.24□□□□□ -0.93
CNOT4-212ENST00000541284 KRT6BP04259 564 aa9.24□□□□□ -0.93
CNOT4-212ENST00000541284 ANXA5P08758 320 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms