RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 PRKACGP22612 351 aa5.07□□□□□ -1.6
YBX3-210ENST00000540975 CD27P26842 260 aa5.07□□□□□ -1.6
YBX3-210ENST00000540975 MC5RP33032 325 aa5.07□□□□□ -1.6
YBX3-210ENST00000540975 LBX1P52954 281 aa5.07□□□□□ -1.6
YBX3-210ENST00000540975 CSE1LP55060 971 aaKnown RBP5.07□□□□□ -1.6
YBX3-210ENST00000540975 GSCP56915 257 aaPredicted RBP5.07□□□□□ -1.6
YBX3-210ENST00000540975 CYCSP99999 105 aaKnown RBP5.07□□□□□ -1.6
YBX3-210ENST00000540975 RBPJQ06330 500 aa5.07□□□□□ -1.6
YBX3-210ENST00000540975 AIMP1Q12904 312 aaKnown RBP5.07□□□□□ -1.6
YBX3-210ENST00000540975 EFTUD2Q15029 972 aaKnown RBP eCLIP5.07□□□□□ -1.6
YBX3-210ENST00000540975 TAF1BQ53T94 588 aaPredicted RBP5.07□□□□□ -1.6
YBX3-210ENST00000540975 C2CD6Q53TS8 623 aa5.07□□□□□ -1.6
YBX3-210ENST00000540975 FAM222BQ8WU58 562 aa5.07□□□□□ -1.6
YBX3-210ENST00000540975 OMA1Q96E52 524 aa5.07□□□□□ -1.6
YBX3-210ENST00000540975 MUS81Q96NY9 551 aa5.07□□□□□ -1.6
YBX3-210ENST00000540975 LPAR4Q99677 370 aa5.07□□□□□ -1.6
YBX3-210ENST00000540975 SLC2A11Q9BYW1 496 aa5.07□□□□□ -1.6
YBX3-210ENST00000540975 SMAD5-AS1Q9Y6J3 95 aa5.07□□□□□ -1.6
YBX3-210ENST00000540975 TRBV5-5A0A0J9YX44 114 aa5.06□□□□□ -1.6
YBX3-210ENST00000540975 FPGTO14772 594 aa5.06□□□□□ -1.6
YBX3-210ENST00000540975 OR52Z1P0C646 297 aa5.06□□□□□ -1.6
YBX3-210ENST00000540975 DSCR10P59022 87 aa5.06□□□□□ -1.6
YBX3-210ENST00000540975 NFATC2Q13469 925 aa5.06□□□□□ -1.6
YBX3-210ENST00000540975 ENPP2Q13822 863 aa5.06□□□□□ -1.6
YBX3-210ENST00000540975 GPR33Q49SQ1 333 aa5.06□□□□□ -1.6
YBX3-210ENST00000540975 ARMC4Q5T2S8 1044 aa5.06□□□□□ -1.6
YBX3-210ENST00000540975 ERMARDQ5T6L9 678 aa5.06□□□□□ -1.6
YBX3-210ENST00000540975 OR4A47Q6IF82 309 aa5.06□□□□□ -1.6
YBX3-210ENST00000540975 LYG1Q8N1E2 194 aa5.06□□□□□ -1.6
YBX3-210ENST00000540975 SLC37A3Q8NCC5 494 aa5.06□□□□□ -1.6
YBX3-210ENST00000540975 NUP37Q8NFH4 326 aa5.06□□□□□ -1.6
YBX3-210ENST00000540975 LRRC3BQ96PB8 259 aa5.06□□□□□ -1.6
YBX3-210ENST00000540975 ZNF300Q96RE9 604 aaPredicted RBP5.06□□□□□ -1.6
YBX3-210ENST00000540975 SLF1Q9BQI6 1058 aa5.06□□□□□ -1.6
YBX3-210ENST00000540975 PRRG4Q9BZD6 226 aa5.06□□□□□ -1.6
YBX3-210ENST00000540975 DNAJC4Q9NNZ3 241 aa5.06□□□□□ -1.6
YBX3-210ENST00000540975 NUDT4Q9NZJ9 180 aa5.06□□□□□ -1.6
YBX3-210ENST00000540975 TBC1D7Q9P0N9 293 aa5.06□□□□□ -1.6
YBX3-210ENST00000540975 H0YAE9 185 aa5.05□□□□□ -1.6
YBX3-210ENST00000540975 SOCS3O14543 225 aa5.05□□□□□ -1.6
YBX3-210ENST00000540975 TEX28O15482 410 aa5.05□□□□□ -1.6
YBX3-210ENST00000540975 HLA-FP30511 346 aa5.05□□□□□ -1.6
YBX3-210ENST00000540975 DEKP35659 375 aaKnown RBP5.05□□□□□ -1.6
YBX3-210ENST00000540975 XGP55808 180 aa5.05□□□□□ -1.6
YBX3-210ENST00000540975 CLDN15P56746 228 aa5.05□□□□□ -1.6
YBX3-210ENST00000540975 MYL7Q01449 175 aa5.05□□□□□ -1.6
YBX3-210ENST00000540975 ELAVL2Q12926 359 aaKnown RBP5.05□□□□□ -1.6
YBX3-210ENST00000540975 TRAP1Q12931 704 aaKnown RBP5.05□□□□□ -1.6
YBX3-210ENST00000540975 MTF1Q14872 753 aa5.05□□□□□ -1.6
YBX3-210ENST00000540975 FASTKD3Q14CZ7 662 aaKnown RBP5.05□□□□□ -1.6
YBX3-210ENST00000540975 NPTX1Q15818 432 aa5.05□□□□□ -1.6
YBX3-210ENST00000540975 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
YBX3-210ENST00000540975 LEKR1Q6ZMV7 388 aa5.05□□□□□ -1.6
YBX3-210ENST00000540975 RBPMS2Q6ZRY4 209 aaKnown RBP5.05□□□□□ -1.6
YBX3-210ENST00000540975 IL17RELQ6ZVW7 336 aa5.05□□□□□ -1.6
YBX3-210ENST00000540975 PCGF5Q86SE9 256 aa5.05□□□□□ -1.6
YBX3-210ENST00000540975 NOA1Q8NC60 698 aaKnown RBP5.05□□□□□ -1.6
YBX3-210ENST00000540975 KCTD6Q8NC69 237 aa5.05□□□□□ -1.6
YBX3-210ENST00000540975 OTUB1Q96FW1 271 aaPredicted RBP5.05□□□□□ -1.6
YBX3-210ENST00000540975 LRRC61Q9BV99 259 aa5.05□□□□□ -1.6
YBX3-210ENST00000540975 GSN-AS1Q9NRJ2 163 aa5.05□□□□□ -1.6
YBX3-210ENST00000540975 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.05□□□□□ -1.6
YBX3-210ENST00000540975 WDR35Q9P2L0 1181 aa5.05□□□□□ -1.6
YBX3-210ENST00000540975 CLDN4O14493 209 aa5.04□□□□□ -1.6
YBX3-210ENST00000540975 IDH3BO43837 385 aa5.04□□□□□ -1.6
YBX3-210ENST00000540975 SLCO2B1O94956 709 aa5.04□□□□□ -1.6
YBX3-210ENST00000540975 IGHEP01854 428 aa5.04□□□□□ -1.6
YBX3-210ENST00000540975 PRKAR1AP10644 381 aa5.04□□□□□ -1.6
YBX3-210ENST00000540975 EPCAMP16422 314 aa5.04□□□□□ -1.6
YBX3-210ENST00000540975 RPL35AP18077 110 aaKnown RBP5.04□□□□□ -1.6
YBX3-210ENST00000540975 ZNF10P21506 573 aaPredicted RBP5.04□□□□□ -1.6
YBX3-210ENST00000540975 AZGP1P25311 298 aaKnown RBP5.04□□□□□ -1.6
YBX3-210ENST00000540975 SHC1P29353 583 aa5.04□□□□□ -1.6
YBX3-210ENST00000540975 SOX3P41225 446 aa5.04□□□□□ -1.6
YBX3-210ENST00000540975 RAD52P43351 418 aa5.04□□□□□ -1.6
YBX3-210ENST00000540975 GUCY2DQ02846 1103 aa5.04□□□□□ -1.6
YBX3-210ENST00000540975 ACSM1Q08AH1 577 aa5.04□□□□□ -1.6
YBX3-210ENST00000540975 CALCOCO2Q13137 446 aa5.04□□□□□ -1.6
YBX3-210ENST00000540975 PRPF4BQ13523 1007 aaKnown RBP5.04□□□□□ -1.6
YBX3-210ENST00000540975 PTPN14Q15678 1187 aa5.04□□□□□ -1.6
YBX3-210ENST00000540975 TMEM266Q2M3C6 531 aa5.04□□□□□ -1.6
YBX3-210ENST00000540975 MFSD4BQ5TF39 518 aa5.04□□□□□ -1.6
YBX3-210ENST00000540975 C16orf54Q6UWD8 224 aa5.04□□□□□ -1.6
YBX3-210ENST00000540975 TDRD5Q8NAT2 981 aaKnown RBP5.04□□□□□ -1.6
YBX3-210ENST00000540975 PGAP3Q96FM1 320 aaPredicted RBP5.04□□□□□ -1.6
YBX3-210ENST00000540975 MAP3K3Q99759 626 aa5.04□□□□□ -1.6
YBX3-210ENST00000540975 ANKEF1Q9NU02 776 aa5.04□□□□□ -1.6
YBX3-210ENST00000540975 CSNK1G3Q9Y6M4 447 aa5.04□□□□□ -1.6
YBX3-210ENST00000540975 MYH14Q7Z406 1995 aaKnown RBP5.04□□□□□ -1.6
YBX3-210ENST00000540975 EPM2AB3EWF7 344 aa5.03□□□□□ -1.6
YBX3-210ENST00000540975 AP5Z1O43299 807 aa5.03□□□□□ -1.6
YBX3-210ENST00000540975 SNX3O60493 162 aa5.03□□□□□ -1.6
YBX3-210ENST00000540975 ATP6AP2O75787 350 aa5.03□□□□□ -1.6
YBX3-210ENST00000540975 KRT33AO76009 404 aa5.03□□□□□ -1.6
YBX3-210ENST00000540975 GATA1P15976 413 aaPredicted RBP5.03□□□□□ -1.6
YBX3-210ENST00000540975 ACHEP22303 614 aa5.03□□□□□ -1.6
YBX3-210ENST00000540975 EEF1B2P24534 225 aaKnown RBP5.03□□□□□ -1.6
YBX3-210ENST00000540975 TSFMP43897 325 aaKnown RBP5.03□□□□□ -1.6
YBX3-210ENST00000540975 RAB28P51157 221 aa5.03□□□□□ -1.6
YBX3-210ENST00000540975 DNA2P51530 1060 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms