RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 NDUFS2O75306 463 aa23.67■■□□□ 1.38
TTC3-225ENST00000540756 MRPL19P49406 292 aaKnown RBP23.67■■□□□ 1.38
TTC3-225ENST00000540756 DMWDQ09019 674 aa23.67■■□□□ 1.38
TTC3-225ENST00000540756 STX5Q13190 355 aa23.67■■□□□ 1.38
TTC3-225ENST00000540756 LCTLQ6UWM7 567 aa23.67■■□□□ 1.38
TTC3-225ENST00000540756 ABRAXAS1Q6UWZ7 409 aa23.67■■□□□ 1.38
TTC3-225ENST00000540756 FAM20CQ8IXL6 584 aa23.67■■□□□ 1.38
TTC3-225ENST00000540756 LIX1Q8N485 282 aa23.67■■□□□ 1.38
TTC3-225ENST00000540756 CLHC1Q8NHS4 586 aa23.67■■□□□ 1.38
TTC3-225ENST00000540756 SETD7Q8WTS6 366 aaKnown RBP23.67■■□□□ 1.38
TTC3-225ENST00000540756 SH3KBP1Q96B97 665 aa23.67■■□□□ 1.38
TTC3-225ENST00000540756 WDR34Q96EX3 536 aa23.67■■□□□ 1.38
TTC3-225ENST00000540756 WDR41Q9HAD4 459 aa23.67■■□□□ 1.38
TTC3-225ENST00000540756 MAP10Q9P2G4 905 aa23.67■■□□□ 1.38
TTC3-225ENST00000540756 ICKQ9UPZ9 632 aa23.67■■□□□ 1.38
TTC3-225ENST00000540756 VPS13AQ96RL7 3174 aa23.67■■□□□ 1.38
TTC3-225ENST00000540756 SPTY2D1-AS1A0A0U1RR47 76 aa23.67■■□□□ 1.38
TTC3-225ENST00000540756 ASPDHA6ND91 283 aa23.67■■□□□ 1.38
TTC3-225ENST00000540756 ENTPD5O75356 428 aa23.67■■□□□ 1.38
TTC3-225ENST00000540756 ERFP50548 548 aa23.67■■□□□ 1.38
TTC3-225ENST00000540756 MAGEB10Q96LZ2 347 aaPredicted RBP23.67■■□□□ 1.38
TTC3-225ENST00000540756 SLC39A3Q9BRY0 314 aa23.67■■□□□ 1.38
TTC3-225ENST00000540756 MMADHCQ9H3L0 296 aaPredicted RBP23.67■■□□□ 1.38
TTC3-225ENST00000540756 GPR27Q9NS67 375 aa23.67■■□□□ 1.38
TTC3-225ENST00000540756 SPATA7Q9P0W8 599 aa23.67■■□□□ 1.38
TTC3-225ENST00000540756 PLXND1Q9Y4D7 1925 aa23.67■■□□□ 1.38
TTC3-225ENST00000540756 PIPSLA2A3N6 862 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 A6NCN8 305 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 MRASO14807 208 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 AXIN1O15169 862 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 WNT1P04628 370 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 BCKDHAP12694 445 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 RAB28P51157 221 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 RAP1GDS1P52306 607 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 HPS6Q86YV9 775 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 PATE1Q8WXA2 126 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 SMPDL3AQ92484 453 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 SPATA6Q9NWH7 488 aaPredicted RBP23.66■■□□□ 1.38
TTC3-225ENST00000540756 PCDHGA11Q9Y5H2 935 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 DGKBQ9Y6T7 804 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 METTL12A8MUP2 240 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 K7ESF4 209 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 CCND1P24385 295 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 TACR1P25103 407 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 POLR2JP52435 117 aaKnown RBP23.66■■□□□ 1.38
TTC3-225ENST00000540756 RPL6Q02878 288 aaKnown RBP23.66■■□□□ 1.38
TTC3-225ENST00000540756 GRIK2Q13002 908 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 RCAN2Q14206 197 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 KPNB1Q14974 876 aaKnown RBP23.66■■□□□ 1.38
TTC3-225ENST00000540756 USP39Q53GS9 565 aaKnown RBP23.66■■□□□ 1.38
TTC3-225ENST00000540756 MED27Q6P2C8 311 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 KRTCAP2Q8N6L1 136 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 SPDL1Q96EA4 605 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 APOLD1Q96LR9 279 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 CDRT15Q96T59 188 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 MVB12BQ9H7P6 319 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 IL1RL2Q9HB29 575 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 TRNAU1APQ9NX07 287 aaKnown RBP23.66■■□□□ 1.38
TTC3-225ENST00000540756 ZIM2Q9NZV7 527 aa23.66■■□□□ 1.38
TTC3-225ENST00000540756 EIF3LQ9Y262 564 aaKnown RBP23.66■■□□□ 1.38
TTC3-225ENST00000540756 TNFP01375 233 aa23.65■■□□□ 1.38
TTC3-225ENST00000540756 BCKDHBP21953 392 aa23.65■■□□□ 1.38
TTC3-225ENST00000540756 PKLRP30613 574 aa23.65■■□□□ 1.38
TTC3-225ENST00000540756 RPS9P46781 194 aaKnown RBP23.65■■□□□ 1.38
TTC3-225ENST00000540756 PGM2L1Q6PCE3 622 aa23.65■■□□□ 1.38
TTC3-225ENST00000540756 C16orf89Q6UX73 402 aa23.65■■□□□ 1.38
TTC3-225ENST00000540756 PHACTR4Q8IZ21 702 aa23.65■■□□□ 1.38
TTC3-225ENST00000540756 RNF148Q8N7C7 305 aa23.65■■□□□ 1.38
TTC3-225ENST00000540756 CMTM7Q96FZ5 175 aa23.65■■□□□ 1.38
TTC3-225ENST00000540756 KLHDC7BQ96G42 594 aa23.65■■□□□ 1.38
TTC3-225ENST00000540756 EBPLQ9BY08 206 aa23.65■■□□□ 1.38
TTC3-225ENST00000540756 PRM3Q9NNZ6 103 aa23.65■■□□□ 1.38
TTC3-225ENST00000540756 PCDHGA7Q9Y5G6 932 aa23.65■■□□□ 1.38
TTC3-225ENST00000540756 SERTM1A2A2V5 107 aa23.64■■□□□ 1.38
TTC3-225ENST00000540756 AMD1P17707 334 aa23.64■■□□□ 1.38
TTC3-225ENST00000540756 PRPH2P23942 346 aa23.64■■□□□ 1.38
TTC3-225ENST00000540756 HSD17B2P37059 387 aa23.64■■□□□ 1.38
TTC3-225ENST00000540756 SLC19A1P41440 591 aa23.64■■□□□ 1.38
TTC3-225ENST00000540756 CXCL12P48061 93 aa23.64■■□□□ 1.38
TTC3-225ENST00000540756 DGKQP52824 942 aa23.64■■□□□ 1.38
TTC3-225ENST00000540756 RPS13P62277 151 aaKnown RBP23.64■■□□□ 1.38
TTC3-225ENST00000540756 TIGD2Q4W5G0 525 aa23.64■■□□□ 1.38
TTC3-225ENST00000540756 FAM129CQ86XR2 697 aa23.64■■□□□ 1.38
TTC3-225ENST00000540756 PARP9Q8IXQ6 854 aa23.64■■□□□ 1.38
TTC3-225ENST00000540756 PGAM4Q8N0Y7 254 aa23.64■■□□□ 1.38
TTC3-225ENST00000540756 ARHGAP24Q8N264 748 aa23.64■■□□□ 1.38
TTC3-225ENST00000540756 CCDC124Q96CT7 223 aaKnown RBP23.64■■□□□ 1.38
TTC3-225ENST00000540756 HAUS8Q9BT25 410 aa23.64■■□□□ 1.38
TTC3-225ENST00000540756 EFCAB11Q9BUY7 163 aa23.64■■□□□ 1.38
TTC3-225ENST00000540756 EHD1Q9H4M9 534 aa23.64■■□□□ 1.38
TTC3-225ENST00000540756 PCOLCE2Q9UKZ9 415 aa23.64■■□□□ 1.38
TTC3-225ENST00000540756 H7BY64 318 aa23.64■■□□□ 1.37
TTC3-225ENST00000540756 TOR1BO14657 336 aa23.64■■□□□ 1.37
TTC3-225ENST00000540756 ATP6V1G2O95670 118 aa23.64■■□□□ 1.37
TTC3-225ENST00000540756 MSX2P35548 267 aaPredicted RBP23.64■■□□□ 1.37
TTC3-225ENST00000540756 C1orf61Q13536 156 aa23.64■■□□□ 1.37
TTC3-225ENST00000540756 PAGE3Q5JUK9 113 aa23.64■■□□□ 1.37
TTC3-225ENST00000540756 TSSK4Q6SA08 328 aa23.64■■□□□ 1.37
TTC3-225ENST00000540756 WASH2PQ6VEQ5 465 aa23.64■■□□□ 1.37
TTC3-225ENST00000540756 C17orf64Q86WR6 236 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms