RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 SIAH3Q8IW03 269 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 ZC3H7AQ8IWR0 971 aaKnown RBP6.94□□□□□ -1.3
YBX3-209ENST00000540747 PRSS58Q8IYP2 241 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 MDS2Q8NDY4 140 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 THAP3Q8WTV1 239 aaPredicted RBP6.94□□□□□ -1.3
YBX3-209ENST00000540747 ASZ1Q8WWH4 475 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 ZNF592Q92610 1267 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 MVB12AQ96EY5 273 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 MAGEB10Q96LZ2 347 aaPredicted RBP6.94□□□□□ -1.3
YBX3-209ENST00000540747 C16orf45Q96MC5 204 aaPredicted RBP6.94□□□□□ -1.3
YBX3-209ENST00000540747 ZNF778Q96MU6 729 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 SPOCK3Q9BQ16 436 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 FERMT1Q9BQL6 677 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 RAB11FIP5Q9BXF6 653 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 ENKD1Q9H0I2 346 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 P2RY12Q9H244 342 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 C14orf105Q9NVL8 296 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 RIC8BQ9NVN3 520 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 STOX2Q9P2F5 926 aaPredicted RBP6.94□□□□□ -1.3
YBX3-209ENST00000540747 SEC14L3Q9UDX4 400 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 TFR2Q9UP52 801 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 PCDHGB6Q9Y5F9 930 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 FAM169AQ9Y6X4 670 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 FBN3Q75N90 2809 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 A0A0J9YVX5 310 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 A0A0U1RQJ8 604 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 ASPDHA6ND91 283 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 RCCD1A6NED2 376 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 IQCF5A8MTL0 148 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 H0YGG7 62 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 ADAM10O14672 748 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 FOXS1O43638 330 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 SUN1O94901 812 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 RASAL1O95294 804 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 C1orf105O95561 183 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 GOT2P00505 430 aaKnown RBP6.93□□□□□ -1.3
YBX3-209ENST00000540747 F10P00742 488 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 IGFBP2P18065 325 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 CAPN3P20807 821 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 MAGEA1P43355 309 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 EMP2P54851 167 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 CSE1LP55060 971 aaKnown RBP6.93□□□□□ -1.3
YBX3-209ENST00000540747 ARF3P61204 181 aaPredicted RBP6.93□□□□□ -1.3
YBX3-209ENST00000540747 KLF1Q13351 362 aaPredicted RBP6.93□□□□□ -1.3
YBX3-209ENST00000540747 MUM1Q2TAK8 710 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 CCDC38Q502W7 563 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 TSTD2Q5T7W7 516 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 ZNF425Q6IV72 752 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 PAQR7Q86WK9 346 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 LRRC57Q8N9N7 239 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 FAM71DQ8N9W8 422 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 KIF18AQ8NI77 898 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 SLC35B2Q8TB61 432 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 PEX13Q92968 403 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 HDAC10Q969S8 669 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 MTFMTQ96DP5 389 aaKnown RBP6.93□□□□□ -1.3
YBX3-209ENST00000540747 POM121Q96HA1 1249 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 GPR137Q96N19 417 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 OR2A5Q96R48 311 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 NPAS2Q99743 824 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 MIPEPQ99797 713 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 ZFYVE21Q9BQ24 234 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.93□□□□□ -1.3
YBX3-209ENST00000540747 MARCH4Q9P2E8 410 aaPredicted RBP6.93□□□□□ -1.3
YBX3-209ENST00000540747 ZC3H7BQ9UGR2 993 aaKnown RBP6.93□□□□□ -1.3
YBX3-209ENST00000540747 TINAGQ9UJW2 476 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 R3HDM2Q9Y2K5 976 aaKnown RBP6.93□□□□□ -1.3
YBX3-209ENST00000540747 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.93□□□□□ -1.3
YBX3-209ENST00000540747 NFS1Q9Y697 457 aa6.93□□□□□ -1.3
YBX3-209ENST00000540747 FLNAP21333 2647 aaKnown RBP6.92□□□□□ -1.3
YBX3-209ENST00000540747 NSD1Q96L73 2696 aaPredicted RBP6.92□□□□□ -1.3
YBX3-209ENST00000540747 AKAP6Q13023 2319 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 MACROD2A1Z1Q3 448 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 F8W8V4 182 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 PRMT5O14744 637 aaPredicted RBP6.92□□□□□ -1.3
YBX3-209ENST00000540747 FFAR3O14843 346 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 GPR42O15529 346 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 PHF2O75151 1096 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 WFS1O76024 890 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 MATN4O95460 622 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 CLDN14O95500 239 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 APOA4P06727 396 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 CYC1P08574 325 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 GRIA1P42261 906 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 BDKRB1P46663 353 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 RELAQ04206 551 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 FASTKQ14296 549 aaKnown RBP6.92□□□□□ -1.3
YBX3-209ENST00000540747 HKDC1Q2TB90 917 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 P3H1Q32P28 736 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.92□□□□□ -1.3
YBX3-209ENST00000540747 CCDC181Q5TID7 509 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 GARNL3Q5VVW2 1013 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 PLAG1Q6DJT9 500 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 NEK10Q6ZWH5 1172 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 FGD2Q7Z6J4 655 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 CDH24Q86UP0 819 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 CNGA4Q8IV77 575 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 SHISA5Q8N114 240 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 KRT222Q8N1A0 295 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 TC2NQ8N9U0 490 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms