RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 PTBP2Q9UKA9 531 aaKnown RBP16.08■□□□□ 0.16
UBC-208ENST00000540700 DOPEY2Q9Y3R5 2298 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 IGKV1-8A0A0C4DH67 115 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 A8MU76 341 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 C2orf74A8MZ97 194 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 ISM1B1AKI9 464 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 TYROBPO43914 113 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 GLRA3O75311 464 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 PROCP04070 461 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 GSTA1P08263 222 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 ANXA5P08758 320 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 ST6GAL1P15907 406 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 OAS2P29728 719 aaKnown RBP16.07■□□□□ 0.16
UBC-208ENST00000540700 TSTA3Q13630 321 aaPredicted RBP16.07■□□□□ 0.16
UBC-208ENST00000540700 MPP2Q14168 576 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 C16orf72Q14CZ0 275 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 ZIC1Q15915 447 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 PTCHD3Q3KNS1 767 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 TTMPQ5BVD1 217 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 KLC3Q6P597 504 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 KLHL35Q6PF15 583 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 ARHGAP22Q7Z5H3 698 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 KLHDC8AQ8IYD2 350 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 SMPDL3AQ92484 453 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 ALKBH8Q96BT7 664 aaKnown RBP16.07■□□□□ 0.16
UBC-208ENST00000540700 MRPL57Q9BQC6 102 aaKnown RBP16.07■□□□□ 0.16
UBC-208ENST00000540700 ARHGAP9Q9BRR9 750 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 TRIM54Q9BYV2 358 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 PITPNM3Q9BZ71 974 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 MRPL46Q9H2W6 279 aaKnown RBP16.07■□□□□ 0.16
UBC-208ENST00000540700 SLC6A20Q9NP91 592 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 CD274Q9NZQ7 290 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 SLC17A7Q9P2U7 560 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 TAC3Q9UHF0 121 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 DCDC2Q9UHG0 476 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 PCDHGA8Q9Y5G5 932 aa16.07■□□□□ 0.16
UBC-208ENST00000540700 CDRT15L2A8MXV6 281 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 COPEO14579 308 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 EFSO43281 561 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 KDM1AO60341 852 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 PLIN3O60664 434 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 SIX3O95343 332 aaPredicted RBP16.06■□□□□ 0.16
UBC-208ENST00000540700 RBP1P09455 135 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 MYZAPP0CAP1 466 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 EPORP19235 508 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 GGT5P36269 586 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 HSD17B2P37059 387 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 HSPA7P48741 367 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 PRKAA1Q13131 559 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 KIR2DS3Q14952 304 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 CLPPQ16740 277 aaPredicted RBP16.06■□□□□ 0.16
UBC-208ENST00000540700 LINC00303Q3SY05 128 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 ATG14Q6ZNE5 492 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 PRSS42Q7Z5A4 293 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 LCA5Q86VQ0 697 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 PLXDC1Q8IUK5 500 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 OR2L3Q8NG85 312 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 WDR36Q8NI36 951 aaKnown RBP16.06■□□□□ 0.16
UBC-208ENST00000540700 WDR48Q8TAF3 677 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 EXTL1Q92935 676 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 MOCOSQ96EN8 888 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 MIPEPQ99797 713 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 ZMYND15Q9H091 742 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 SYNPO2LQ9H987 977 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 ACSS2Q9NR19 701 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 CUEDC1Q9NWM3 386 aaPredicted RBP16.06■□□□□ 0.16
UBC-208ENST00000540700 NOTCH2Q04721 2471 aa16.06■□□□□ 0.16
UBC-208ENST00000540700 CCDC189A1A4V9 331 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 TLCD2A6NGC4 264 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 SLC9B1P1A6NJY1 282 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 A8MT66 165 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 G3V2L1 256 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 TERTO14746 1132 aaKnown RBP16.05■□□□□ 0.16
UBC-208ENST00000540700 ZW10O43264 779 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 HCRTR1O43613 425 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 DLX3O60479 287 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 PRAMEF4O60810 478 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 CCKBRP32239 447 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 SEPHS1P49903 392 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 INHBCP55103 352 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 SRSF6Q13247 344 aaKnown RBP16.05■□□□□ 0.16
UBC-208ENST00000540700 SETDB1Q15047 1291 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 PFKFB4Q16877 469 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 SLC5A12Q1EHB4 618 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 CDKL4Q5MAI5 379 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 PHF19Q5T6S3 580 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 CACHD1Q5VU97 1274 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 PRAMEF9Q5VWM5 478 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 PRAMEF13Q5VWM6 474 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 FAM219BQ5XKK7 198 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 FCRL6Q6DN72 434 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 SULT1C3Q6IMI6 304 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 ARMC6Q6NXE6 501 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 CNPY4Q8N129 248 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 RAB42Q8N4Z0 105 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 PTGR2Q8N8N7 351 aaPredicted RBP16.05■□□□□ 0.16
UBC-208ENST00000540700 UBTD2Q8WUN7 234 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 GRAMD1AQ96CP6 724 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 PHF21BQ96EK2 531 aa16.05■□□□□ 0.16
UBC-208ENST00000540700 ZDHHC12Q96GR4 267 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms