RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 CAMK2GQ13555 558 aaPredicted RBP16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 INTS11Q5TA45 600 aaKnown RBP16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 ZC3H7AQ8IWR0 971 aaKnown RBP16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 HUS1BQ8NHY5 278 aa16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 RAD9AQ99638 391 aa16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 TMEM121BQ9BXQ6 578 aaPredicted RBP16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 NAA50Q9GZZ1 169 aaKnown RBP16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 CLMPQ9H6B4 373 aa16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 RTCAO00442 366 aaKnown RBP16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 CYP17A1P05093 508 aa16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 MAT2AP31153 395 aaKnown RBP16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 SLC5A2P31639 672 aa16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 HNMTP50135 292 aa16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 CLDN8P56748 225 aa16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 KCNAB2Q13303 367 aa16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 LDLRAP1Q5SW96 308 aa16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 ZNF548Q8NEK5 533 aaPredicted RBP16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 DUSP26Q9BV47 211 aa16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 CNOT11Q9UKZ1 510 aaKnown RBP16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 XPNPEP2O43895 674 aa16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 LILRB3O75022 631 aa16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 EFEMP2O95967 443 aa16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 CDH2P19022 906 aaPredicted RBP16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 CHI3L1P36222 383 aaPredicted RBP16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 CSNK1DP48730 415 aa16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 PFN3P60673 137 aa16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 CYBRD1Q53TN4 286 aa16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 MSRB3Q8IXL7 192 aa16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 DPP10Q8N608 796 aa16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 OR4A15Q8NGL6 344 aa16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 SPPL3Q8TCT6 385 aa16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 CCM2Q9BSQ5 444 aa16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 CPEB1Q9BZB8 566 aaKnown RBP16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 SLC29A3Q9BZD2 475 aa16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 MIEF1Q9NQG6 463 aa16.54■□□□□ 0.24
EPB41L3-204ENST00000540638 AREL1O15033 823 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 ACOX3O15254 700 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 ADH1CP00326 375 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 CD9P21926 228 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 OR1E2P47887 323 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 SEC13P55735 322 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 RD3Q7Z3Z2 195 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 TCAIMQ8N3R3 496 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 OR8J3Q8NGG0 315 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 OR8D1Q8WZ84 308 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 ECHDC3Q96DC8 303 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 MCCC1Q96RQ3 725 aaPredicted RBP16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 SLC9A3R1O14745 358 aaPredicted RBP16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 NUAK1O60285 661 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 ERN1O75460 977 aaKnown RBP16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 ETHE1O95571 254 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 POU2F1P14859 743 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 ZNF30P17039 623 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 ALDH4A1P30038 563 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 FMO3P31513 532 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 SHMT2P34897 504 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 NRIP1P48552 1158 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 AP1S2P56377 157 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 TBPL1P62380 186 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 PMS2P3Q13401 168 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 ADRM1Q16186 407 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 PLEKHS1Q5SXH7 462 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 C11orf74Q86VG3 221 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 MUC13Q9H3R2 512 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 PDP1Q9P0J1 537 aaPredicted RBP16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 C5AR2Q9P296 337 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 SH3GLB1Q9Y371 365 aa16.53■□□□□ 0.24
EPB41L3-204ENST00000540638 ARNTLO00327 626 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 CA3P07451 260 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 CD22P20273 847 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 AGXTP21549 392 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 C2orf80Q0P641 193 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 RUNDC3AQ59EK9 446 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 CAPN13Q6MZZ7 669 aaPredicted RBP16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 PATL1Q86TB9 770 aaKnown RBP16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 ISG20Q96AZ6 181 aaKnown RBP16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 CMTM7Q96FZ5 175 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 RDH14Q9HBH5 336 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 DNAJB9Q9UBS3 223 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 BTBD3Q9Y2F9 522 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 TESMINQ9Y4I5 508 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 CCL27Q9Y4X3 112 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 A0A1W2PPW3 197 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 PCDH7O60245 1069 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 PFDN1O60925 122 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 KLK1P06870 262 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 JUPP14923 745 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 AMD1P17707 334 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 PTGER1P34995 402 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 STT3AP46977 705 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 GALK1P51570 392 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 ALDH3A2P51648 485 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 HIST2H2ACQ16777 129 aaPredicted RBP16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 SLC36A3Q495N2 470 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 ZDHHC20Q5W0Z9 365 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 HIST2H2AA3Q6FI13 130 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 TRIM46Q7Z4K8 759 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 PTRH1Q86Y79 214 aaKnown RBP16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 FAM20CQ8IXL6 584 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms