RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 DHDHQ9UQ10 334 aa3.7□□□□□ -1.82
AC055720.1-201ENST00000539552 MAP2P11137 1827 aaKnown RBP3.7□□□□□ -1.82
AC055720.1-201ENST00000539552 COL11A2P13942 1736 aaPredicted RBP3.7□□□□□ -1.82
AC055720.1-201ENST00000539552 ZNF609O15014 1411 aa3.7□□□□□ -1.82
AC055720.1-201ENST00000539552 UTYO14607 1347 aa3.7□□□□□ -1.82
AC055720.1-201ENST00000539552 TTC21AQ8NDW8 1320 aa3.7□□□□□ -1.82
AC055720.1-201ENST00000539552 SETD2Q9BYW2 2564 aaPredicted RBP3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 FAM237AA0A1B0GTK4 181 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 GSAPA4D1B5 854 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 SLC15A5A6NIM6 579 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 K7EQM0 130 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 PPP6CO00743 305 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 CES2O00748 559 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 XPO1O14980 1071 aaKnown RBP3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 LRRTM2O43300 516 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 LANCL1O43813 399 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 B4GALT2O60909 372 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 FAM20BO75063 409 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 ATG13O75143 517 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 GPC4O75487 556 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 ADAP00813 363 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 TFP02787 698 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 IQCF3P0C7M6 154 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 VPREB1P12018 145 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 IL7RP16871 459 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 ZNF182P17025 639 aaPredicted RBP3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 ZNF3P17036 446 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 ANXA7P20073 488 aaKnown RBP3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 DRD5P21918 477 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 CPN2P22792 545 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 DNASE1P24855 282 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 HOXD9P28356 352 aaPredicted RBP3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 SLC8A1P32418 973 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 EPHX2P34913 555 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 HNRNPFP52597 415 aaKnown RBP3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 SMSP52788 366 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 SUCLG1P53597 346 aaKnown RBP3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 MAP3K7CLP57077 242 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 ADORA2A-AS1P86434 159 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 B4GALNT1Q00973 533 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 GALK2Q01415 458 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 MC2RQ01718 297 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 ITIH3Q06033 890 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 SRSF5Q13243 272 aaKnown RBP3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 DRAP1Q14919 205 aaPredicted RBP3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 VEPH1Q14D04 833 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 WDR43Q15061 677 aaKnown RBP eCLIP3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 RBBP5Q15291 538 aaKnown RBP3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 COL28A1Q2UY09 1125 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 EDRF1Q3B7T1 1238 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 FBXO43Q4G163 708 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 C9orf50Q5SZB4 431 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 DCST1Q5T197 706 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 ARMC12Q5T9G4 340 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 LIN9Q5TKA1 542 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 KCTD11Q693B1 232 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 PDPK2PQ6A1A2 396 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 GRHL2Q6ISB3 625 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 PMF1Q6P1K2 205 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 C6orf89Q6UWU4 347 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 IL20RBQ6UXL0 311 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 DLEU7Q6UYE1 221 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 ZNF813Q6ZN06 617 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 NANOGNBQ7Z5D8 188 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 LDB1Q86U70 411 aaPredicted RBP3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 TSPAN33Q86UF1 283 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 COMTD1Q86VU5 262 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 VRK3Q8IV63 474 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 ZDHHC21Q8IVQ6 265 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 MAPKAPK5Q8IW41 473 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 GPR135Q8IZ08 494 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 TDHQ8IZJ6 230 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 ZNF276Q8N554 614 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 RNF148Q8N7C7 305 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 GBP7Q8N8V2 638 aaPredicted RBP3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 DNAAF1Q8NEP3 725 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 HUS1BQ8NHY5 278 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 GOLGA5Q8TBA6 731 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 TRPC4APQ8TEL6 797 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 C2CD4CQ8TF44 421 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 ATP8B4Q8TF62 1192 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 ATG4AQ8WYN0 398 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 STARD8Q92502 1023 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 FIG4Q92562 907 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 RAD54LQ92698 747 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 AP2M1Q96CW1 435 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 RSPRY1Q96DX4 576 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 DHTKD1Q96HY7 919 aaPredicted RBP3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 RPGRIP1Q96KN7 1286 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 C7orf34Q96L11 122 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 CATSPER2Q96P56 530 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 QRFPRQ96P65 431 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 ZNF607Q96SK3 696 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 FAM213AQ9BRX8 229 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 HDHD5Q9BXW7 423 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 GPR87Q9BY21 358 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 PKIBQ9C010 78 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 TMEM245Q9H330 911 aa3.69□□□□□ -1.82
AC055720.1-201ENST00000539552 HIPK3Q9H422 1215 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms