RNA–Protein interactions for RNA: ENST00000539271.5

LRTOMT-216, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 4 BASIC

Gene LRTOMT, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-216ENST00000539271 SRPK3Q9UPE1 567 aa8.61□□□□□ -1.03
LRTOMT-216ENST00000539271 MRPS18BQ9Y676 258 aaKnown RBP8.61□□□□□ -1.03
LRTOMT-216ENST00000539271 A0A0J9YVX5 310 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 FITM1A5D6W6 292 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 NPEPPSL1A6NEC2 478 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 CDC7O00311 574 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 PHGDHO43175 533 aaKnown RBP8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 SRPX2O60687 465 aaPredicted RBP8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 KATNA1O75449 491 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 CREG1O75629 220 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 FAM155BO75949 473 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 RECKO95980 971 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 CAPN1P07384 714 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 RAB40ALP0C0E4 278 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 PTPN4P29074 926 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 SLC12A2P55011 1212 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 RELAQ04206 551 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 CDC20Q12834 499 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 NAE1Q13564 534 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 USP10Q14694 798 aaKnown RBP8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 ZKSCAN8Q15776 578 aaPredicted RBP8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 TBR1Q16650 682 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 PPP1R3AQ16821 1122 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 ZXDCQ2QGD7 858 aaPredicted RBP8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 PTCHD3Q3KNS1 767 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 TCTE1Q5JU00 501 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 UBAP2Q5T6F2 1119 aaKnown RBP8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 THEMIS2Q5TEJ8 643 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 YOD1Q5VVQ6 348 aaPredicted RBP8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 PRAMEF13Q5VWM6 474 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 FBXO42Q6P3S6 717 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 LSM14AQ8ND56 463 aaKnown RBP8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 OR56A3Q8NH54 315 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 PROKR1Q8TCW9 393 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 FBXL8Q96CD0 374 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 CATSPER2Q96P56 530 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 GBP5Q96PP8 586 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 RUFY1Q96T51 708 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 ZFYVE21Q9BQ24 234 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 NDC1Q9BTX1 674 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 SGPP1Q9BX95 441 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 FUT8Q9BYC5 575 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 NLNQ9BYT8 704 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 TRIM54Q9BYV2 358 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 DERL2Q9GZP9 239 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 PCBD2Q9H0N5 130 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 ATG10Q9H0Y0 220 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 CDC42EP4Q9H3Q1 356 aaKnown RBP8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 ACTL8Q9H568 366 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 L2HGDHQ9H9P8 463 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 CUEDC1Q9NWM3 386 aaPredicted RBP8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 IRAK4Q9NWZ3 460 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 ARL15Q9NXU5 204 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 UTP6Q9NYH9 597 aaKnown RBP8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 SNX7Q9UNH6 387 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 FARSAQ9Y285 508 aaKnown RBP8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 CNTRLQ7Z7A1 2325 aa8.6□□□□□ -1.03
LRTOMT-216ENST00000539271 LOC105369274A0A096LPK9 316 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 LOC102723532A0A0G2JNH3 316 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 PABPN1LA6NDY0 278 aaKnown RBP8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 H0YGG7 62 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 PRKAR1AP10644 381 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 EZRP15311 586 aaKnown RBP8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 STMN1P16949 149 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 AGXTP21549 392 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 CCND1P24385 295 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 HRH2P25021 359 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 PHBP35232 272 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 ARSFP54793 590 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 VSX2P58304 361 aaPredicted RBP8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 RAB10P61026 200 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 ARF3P61204 181 aaPredicted RBP8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 RPS18P62269 152 aaKnown RBP8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 RPS15P62841 145 aaKnown RBP8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 DCDP81605 110 aaKnown RBP8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 CDKL1Q00532 357 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 GRM7Q14831 915 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 NCF4Q15080 339 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 TSNQ15631 228 aaKnown RBP8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 PRTGQ2VWP7 1150 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 LINC00303Q3SY05 128 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 TAF1BQ53T94 588 aaPredicted RBP8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 WASHC2DQ5SRD0 308 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 ATP1A1-AS1Q5TC04 95 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 C1orf189Q5VU69 101 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 FRMPD2BQ6IN97 320 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 CAPN13Q6MZZ7 669 aaPredicted RBP8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 LCTLQ6UWM7 567 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 ADAMTSL2Q86TH1 951 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 SYVN1Q86TM6 617 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 IFT20Q8IY31 132 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 OR4N4Q8N0Y3 316 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 ENDOVQ8N8Q3 282 aaKnown RBP8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 TTC29Q8NA56 475 aaPredicted RBP8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 LRRN4CLQ8ND94 238 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 ATL1Q8WXF7 558 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 EXTL1Q92935 676 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 MED8Q96G25 268 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 UBXN10Q96LJ8 280 aa8.59□□□□□ -1.03
LRTOMT-216ENST00000539271 CYTH2Q99418 400 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms