RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 TRPS1Q9UHF7 1281 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 BTRCQ9Y297 605 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 TRAF6Q9Y4K3 522 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 PCDHB11Q9Y5F2 797 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 KCNE2Q9Y6J6 123 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 IGF2RP11717 2491 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 A0A0G2JND7 137 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 A0A1W2PPV9 198 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 PIPSLA2A3N6 862 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 FAM221BA6H8Z2 402 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 BTN3A3O00478 584 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 PPM1DO15297 605 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 DIAPH2O60879 1101 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 CLDN9O95484 217 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 CHEK2O96017 543 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 CAPN1P07384 714 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 EBLN1P0CF75 366 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 MYF5P13349 255 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 TYRP1P17643 537 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 GNAZP19086 355 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 VARSP26640 1264 aaKnown RBP13.64□□□□□ -0.23
CD4-208ENST00000538827 SERPINB3P29508 390 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 CMPK1P30085 196 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 PEBP1P30086 187 aaKnown RBP13.64□□□□□ -0.23
CD4-208ENST00000538827 FASLGP48023 281 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 AQP5P55064 265 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 SLBPQ14493 270 aaKnown RBP eCLIP13.64□□□□□ -0.23
CD4-208ENST00000538827 AASDHQ4L235 1098 aaPredicted RBP13.64□□□□□ -0.23
CD4-208ENST00000538827 TCHHL1Q5QJ38 904 aaPredicted RBP13.64□□□□□ -0.23
CD4-208ENST00000538827 ZCCHC8Q6NZY4 707 aaKnown RBP13.64□□□□□ -0.23
CD4-208ENST00000538827 EFL1Q7Z2Z2 1120 aaKnown RBP13.64□□□□□ -0.23
CD4-208ENST00000538827 KANSL1Q7Z3B3 1105 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 DDIASQ8IXT1 998 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 EID2Q8N6I1 236 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 GPR156Q8NFN8 814 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 HMGCLL1Q8TB92 370 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 TWIST2Q8WVJ9 160 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 ZFPM2Q8WW38 1151 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 DUSP23Q9BVJ7 150 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 TMEM120AQ9BXJ8 343 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.64□□□□□ -0.23
CD4-208ENST00000538827 NUF2Q9BZD4 464 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 MRPS30Q9NP92 439 aaKnown RBP13.64□□□□□ -0.23
CD4-208ENST00000538827 CUEDC1Q9NWM3 386 aaPredicted RBP13.64□□□□□ -0.23
CD4-208ENST00000538827 OR6C2Q9NZP2 312 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 KLHL14Q9P2G3 628 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 HAO1Q9UJM8 370 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 RNF11Q9Y3C5 154 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 TIMM22Q9Y584 194 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 RNF215Q9Y6U7 377 aa13.64□□□□□ -0.23
CD4-208ENST00000538827 LILRA5A6NI73 299 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 SLCO1B7G3V0H7 640 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 HGSO14964 777 aaPredicted RBP13.63□□□□□ -0.23
CD4-208ENST00000538827 KCNK5O95279 499 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 TGDSO95455 350 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 GIMD1P0DJR0 217 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 UROSP10746 265 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 AMD1P17707 334 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 HTR6P50406 440 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 HK2P52789 917 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 ARFIP2P53365 341 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 GABPB1Q06547 395 aaPredicted RBP13.63□□□□□ -0.23
CD4-208ENST00000538827 DOC2AQ14183 400 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 SF3A2Q15428 464 aaKnown RBP13.63□□□□□ -0.23
CD4-208ENST00000538827 NR0B2Q15466 257 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 CPSF6Q16630 551 aaKnown RBP eCLIP13.63□□□□□ -0.23
CD4-208ENST00000538827 SGO1Q5FBB7 561 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 CATSPEREQ5SY80 951 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 GKAP1Q5VSY0 366 aaPredicted RBP13.63□□□□□ -0.23
CD4-208ENST00000538827 ICE2Q659A1 982 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 GRHL2Q6ISB3 625 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 OGFOD3Q6PK18 319 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 SCIMPQ6UWF3 145 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 MAVSQ7Z434 540 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 TRIM73Q86UV7 250 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 FAM20CQ8IXL6 584 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 ADGRF3Q8IZF5 1079 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 CLYBLQ8N0X4 340 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 OR4C6Q8NH72 309 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 METTL6Q8TCB7 284 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 SETD7Q8WTS6 366 aaKnown RBP13.63□□□□□ -0.23
CD4-208ENST00000538827 CCT6BQ92526 530 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 RSC1A1Q92681 617 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 NTMT1Q9BV86 223 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 SLC29A3Q9BZD2 475 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 PELI2Q9HAT8 420 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 KCNK4Q9NYG8 393 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 ACTR10Q9NZ32 417 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 VTI1BQ9UEU0 232 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 ZNF225Q9UK10 706 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 LHX6Q9UPM6 363 aa13.63□□□□□ -0.23
CD4-208ENST00000538827 GCN1Q92616 2671 aaKnown RBP13.63□□□□□ -0.23
CD4-208ENST00000538827 LNP1A1A4G5 178 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 C2orf74A8MZ97 194 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 TRIM38O00635 465 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 PIP5K1BO14986 540 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 HDAC3O15379 428 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 SIGLEC6O43699 453 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 SNX3O60493 162 aa13.62□□□□□ -0.23
CD4-208ENST00000538827 PRAMEF4O60810 478 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms