RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 PITRM1Q5JRX3 1037 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 TMEM125Q96AQ2 219 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 EBF3Q9H4W6 596 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 METTL7AQ9H8H3 244 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 C14orf105Q9NVL8 296 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 WRAP73Q9P2S5 460 aaPredicted RBP16.39■□□□□ 0.21
SCARB1-205ENST00000538291 A8MUI8 341 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 TRAPPC6AO75865 159 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 SEPHS1P49903 392 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 XKP51811 444 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 CD47Q08722 323 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 FCHO2Q0JRZ9 810 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 CYP1B1Q16678 543 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 CEP97Q8IW35 865 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 TTYH3Q9C0H2 523 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 OXSMQ9NWU1 459 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 NPIPA5E9PKD4 350 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 LEFTY2O00292 366 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 SNX4O95219 450 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 EEFSECP57772 596 aaKnown RBP16.39■□□□□ 0.21
SCARB1-205ENST00000538291 PITPNAQ00169 270 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 HYAL2Q12891 473 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 KLHL36Q8N4N3 616 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 Q8N9G6 341 aaPredicted RBP16.39■□□□□ 0.21
SCARB1-205ENST00000538291 TOP1MTQ969P6 601 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 NPIPA1Q9UND3 350 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 MTMR11A4FU01 709 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 PPEF2O14830 753 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 ITGA10O75578 1167 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 APOC1P02654 83 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 RPL26P61254 145 aaKnown RBP16.38■□□□□ 0.21
SCARB1-205ENST00000538291 GRM2Q14416 872 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 AAK1Q2M2I8 961 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 PRPF38BQ5VTL8 546 aaKnown RBP16.38■□□□□ 0.21
SCARB1-205ENST00000538291 FAM156AQ8NDB6 213 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 KAT8Q9H7Z6 458 aaKnown RBP16.38■□□□□ 0.21
SCARB1-205ENST00000538291 MARCH7Q9H992 704 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 RC3H2Q9HBD1 1191 aaKnown RBP16.38■□□□□ 0.21
SCARB1-205ENST00000538291 B4GALT2O60909 372 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 RPLP0P05388 317 aaKnown RBP16.38■□□□□ 0.21
SCARB1-205ENST00000538291 KLF1Q13351 362 aaPredicted RBP16.38■□□□□ 0.21
SCARB1-205ENST00000538291 ABCA11PQ4W5N1 156 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 COLEC12Q5KU26 742 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 LY6G5CQ5SRR4 150 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 PAMR1Q6UXH9 720 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 DLK2Q6UY11 383 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 ARMC10Q8N2F6 343 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 PFDN2Q9UHV9 154 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 TMED5Q9Y3A6 229 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 F2P00734 622 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 JMJD7P0C870 316 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 ENGP17813 658 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 AZGP1P25311 298 aaKnown RBP16.38■□□□□ 0.21
SCARB1-205ENST00000538291 MAGEA11P43364 429 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 CHAF1BQ13112 559 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 ARFRP1Q13795 201 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 HFE2Q6ZVN8 426 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 OR5AK3PQ8NH89 298 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 GEMIN6Q8WXD5 167 aaKnown RBP16.38■□□□□ 0.21
SCARB1-205ENST00000538291 E7ENX8 843 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 NOBOXO60393 691 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 RCBTB2O95199 551 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 KAT7O95251 611 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 SIX3O95343 332 aaPredicted RBP16.38■□□□□ 0.21
SCARB1-205ENST00000538291 CYP11A1P05108 521 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 IL1R2P27930 398 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 IDNKQ5T6J7 187 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 LINGO2Q7L985 606 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 OTUB2Q96DC9 234 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 SAMD11Q96NU1 681 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 TBX5Q99593 518 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 SEC61A2Q9H9S3 476 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 MADCAM1Q13477 382 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 MS4A13Q5J8X5 152 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 KIAA1161Q6NSJ0 714 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 DCUN1D3Q8IWE4 304 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 TWNKQ96RR1 684 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 MNTQ99583 582 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 POLR2J2Q9GZM3 115 aaKnown RBP16.38■□□□□ 0.21
SCARB1-205ENST00000538291 GRHL1Q9NZI5 618 aa16.38■□□□□ 0.21
SCARB1-205ENST00000538291 A8MT66 165 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 PGAM2P15259 253 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 SERINC3Q13530 473 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 SDR16C5Q8N3Y7 309 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 PAK6Q9NQU5 681 aaPredicted RBP16.37■□□□□ 0.21
SCARB1-205ENST00000538291 ZNF639Q9UID6 485 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 MEMO1Q9Y316 297 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 ABLIM1O14639 778 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 GRID2O43424 1007 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 CYP17A1P05093 508 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 DSC3Q14574 896 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 NAT8LQ8N9F0 302 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 OR56A1Q8NGH5 318 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 FAM83CQ9BQN1 747 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 TMEM98Q9Y2Y6 226 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 CCNKO75909 580 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 DUSP3P51452 185 aaPredicted RBP16.37■□□□□ 0.21
SCARB1-205ENST00000538291 ROR2Q01974 943 aaKnown RBP16.37■□□□□ 0.21
SCARB1-205ENST00000538291 TYSND1Q2T9J0 566 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 CLEC12AQ5QGZ9 265 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms