RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 TRIM2Q9C040 744 aa10.92□□□□□ -0.66
LINC00346-201ENST00000538077 ZCCHC3Q9NUD5 404 aaKnown RBP10.92□□□□□ -0.66
LINC00346-201ENST00000538077 CDC14AQ9UNH5 594 aa10.92□□□□□ -0.66
LINC00346-201ENST00000538077 CNTN6Q9UQ52 1028 aa10.92□□□□□ -0.66
LINC00346-201ENST00000538077 H0YGN5 161 aa10.92□□□□□ -0.66
LINC00346-201ENST00000538077 COCHO43405 550 aa10.92□□□□□ -0.66
LINC00346-201ENST00000538077 SERPINA3P01011 423 aa10.92□□□□□ -0.66
LINC00346-201ENST00000538077 ETV3P41162 512 aa10.92□□□□□ -0.66
LINC00346-201ENST00000538077 BCAP31P51572 246 aa10.92□□□□□ -0.66
LINC00346-201ENST00000538077 RAB2AP61019 212 aa10.92□□□□□ -0.66
LINC00346-201ENST00000538077 SEMA3AQ14563 771 aa10.92□□□□□ -0.66
LINC00346-201ENST00000538077 DPYSL2Q16555 572 aa10.92□□□□□ -0.66
LINC00346-201ENST00000538077 SLC5A9Q2M3M2 681 aa10.92□□□□□ -0.66
LINC00346-201ENST00000538077 C5orf22Q49AR2 442 aa10.92□□□□□ -0.66
LINC00346-201ENST00000538077 CRTC2Q53ET0 693 aaPredicted RBP10.92□□□□□ -0.66
LINC00346-201ENST00000538077 C1orf189Q5VU69 101 aa10.92□□□□□ -0.66
LINC00346-201ENST00000538077 CEP97Q8IW35 865 aa10.92□□□□□ -0.66
LINC00346-201ENST00000538077 KLHDC7BQ96G42 594 aa10.92□□□□□ -0.66
LINC00346-201ENST00000538077 CRELD1Q96HD1 420 aa10.92□□□□□ -0.66
LINC00346-201ENST00000538077 NSMCE3Q96MG7 304 aa10.92□□□□□ -0.66
LINC00346-201ENST00000538077 RHCGQ9UBD6 479 aa10.92□□□□□ -0.66
LINC00346-201ENST00000538077 VPS29Q9UBQ0 182 aa10.92□□□□□ -0.66
LINC00346-201ENST00000538077 SPEF2Q9C093 1822 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 PRAMEF12O95522 483 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 UNGP13051 313 aaPredicted RBP10.91□□□□□ -0.66
LINC00346-201ENST00000538077 ZNF16P17020 682 aaPredicted RBP10.91□□□□□ -0.66
LINC00346-201ENST00000538077 ZNF3P17036 446 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 RPS9P46781 194 aaKnown RBP10.91□□□□□ -0.66
LINC00346-201ENST00000538077 ABCA11PQ4W5N1 156 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 SLC9A4Q6AI14 798 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 PGAM4Q8N0Y7 254 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 CLDN19Q8N6F1 224 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 RASSF5Q8WWW0 418 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 MMABQ96EY8 250 aaPredicted RBP10.91□□□□□ -0.66
LINC00346-201ENST00000538077 PRICKLE1Q96MT3 831 aaPredicted RBP10.91□□□□□ -0.66
LINC00346-201ENST00000538077 KCNA7Q96RP8 456 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 EBF4Q9BQW3 602 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 TMED9Q9BVK6 235 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 PCDHAC1Q9H158 963 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 OR51B5Q9H339 312 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 TRPV5Q9NQA5 729 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 IGSF9Q9P2J2 1179 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 STOML2Q9UJZ1 356 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 RNF11Q9Y3C5 154 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 COMMD3-BMI1R4GMX3 469 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 LEFTY1O75610 366 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 SNAI1O95863 264 aaPredicted RBP10.91□□□□□ -0.66
LINC00346-201ENST00000538077 MATN1P21941 496 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 GGT5P36269 586 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 MAP3K8P41279 467 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 AP2S1P53680 142 aaPredicted RBP10.91□□□□□ -0.66
LINC00346-201ENST00000538077 ELOAQ14241 798 aaKnown RBP10.91□□□□□ -0.66
LINC00346-201ENST00000538077 PRPF38BQ5VTL8 546 aaKnown RBP10.91□□□□□ -0.66
LINC00346-201ENST00000538077 ZZZ3Q8IYH5 903 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 YIPF7Q8N8F6 280 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 RFKQ969G6 155 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 GATA5Q9BWX5 397 aaPredicted RBP10.91□□□□□ -0.66
LINC00346-201ENST00000538077 TPSD1Q9BZJ3 242 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 IFT80Q9P2H3 777 aaPredicted RBP10.91□□□□□ -0.66
LINC00346-201ENST00000538077 A0A1W2PRG6 482 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 ILVBLA1L0T0 632 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 C2orf78A6NCI8 922 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 GPR89AB7ZAQ6 455 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 GPR89BP0CG08 455 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 HNRNPH3P31942 346 aaKnown RBP10.91□□□□□ -0.66
LINC00346-201ENST00000538077 XKP51811 444 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 DGKQP52824 942 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 PNLIPRP1P54315 467 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 SORCS1Q8WY21 1168 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 MYADML2A6NDP7 307 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 WASHC1A8K0Z3 465 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 TTC34A8MYJ7 566 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 LOC730098B7Z3J9 87 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 WASH3PC4AMC7 463 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 SLC7A4O43246 635 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 CLPXO76031 633 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 SOD2P04179 222 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 PRPS2P11908 318 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 SPIN3Q5JUX0 258 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 TMEM198Q66K66 360 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 BRAT1Q6PJG6 821 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 WASH2PQ6VEQ5 465 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 AMIGO3Q86WK7 504 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 UFD1Q92890 307 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 TMEM125Q96AQ2 219 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 SNTG1Q9NSN8 517 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 P2RX2Q9UBL9 471 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 SERTAD3Q9UJW9 196 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 PMF1-BGLAPU3KQ54 211 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 OR6C74A6NCV1 312 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 GABRDO14764 452 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 PLD2O14939 933 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 ADAMDEC1O15204 470 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 CSTF1Q05048 431 aaKnown RBP10.91□□□□□ -0.66
LINC00346-201ENST00000538077 DCTN2Q13561 401 aaKnown RBP10.91□□□□□ -0.66
LINC00346-201ENST00000538077 SLC2A7Q6PXP3 512 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 TTLL10Q6ZVT0 673 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 CMTM7Q96FZ5 175 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 ZFP3Q96NJ6 502 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 B3GAT2Q9NPZ5 323 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms