RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 ABHD18Q0P651 414 aa15.16■□□□□ 0.02
MKS1-204ENST00000537529 DUOXA1Q1HG43 343 aa15.16■□□□□ 0.02
MKS1-204ENST00000537529 NADK2Q4G0N4 442 aa15.16■□□□□ 0.02
MKS1-204ENST00000537529 PYCR3Q53H96 274 aa15.16■□□□□ 0.02
MKS1-204ENST00000537529 CPA6Q8N4T0 437 aa15.16■□□□□ 0.02
MKS1-204ENST00000537529 DHRSXQ8N5I4 330 aa15.16■□□□□ 0.02
MKS1-204ENST00000537529 GFM2Q969S9 779 aaKnown RBP15.16■□□□□ 0.02
MKS1-204ENST00000537529 AURKBQ96GD4 344 aaPredicted RBP15.16■□□□□ 0.02
MKS1-204ENST00000537529 REXO5Q96IC2 774 aaKnown RBP15.16■□□□□ 0.02
MKS1-204ENST00000537529 LINC00615Q96LM1 132 aaPredicted RBP15.16■□□□□ 0.02
MKS1-204ENST00000537529 CLK4Q9HAZ1 481 aaKnown RBP15.16■□□□□ 0.02
MKS1-204ENST00000537529 TRPV4Q9HBA0 871 aa15.16■□□□□ 0.02
MKS1-204ENST00000537529 MAPRE3Q9UPY8 281 aa15.16■□□□□ 0.02
MKS1-204ENST00000537529 DYRK1BQ9Y463 629 aa15.16■□□□□ 0.02
MKS1-204ENST00000537529 ZFC3H1O60293 1989 aaKnown RBP15.15■□□□□ 0.02
MKS1-204ENST00000537529 TBC1D3BA6NDS4 549 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 VEGFDO43915 354 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 GSNP06396 782 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 COX7A2P14406 83 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 GSTT1P30711 240 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 CDKN2CP42773 168 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 MTHFRP42898 656 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 GZMMP51124 257 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 TBPL1P62380 186 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 ENPP6Q6UWR7 440 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 MMAAQ8IVH4 418 aaKnown RBP15.15■□□□□ 0.02
MKS1-204ENST00000537529 SYTL1Q8IYJ3 562 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 METTL25Q8N6Q8 603 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 MAGEE2Q8TD90 523 aaPredicted RBP15.15■□□□□ 0.02
MKS1-204ENST00000537529 ZNF480Q8WV37 535 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 REXO4Q9GZR2 422 aaKnown RBP15.15■□□□□ 0.02
MKS1-204ENST00000537529 MAGIXQ9H6Y5 334 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 FAM120CQ9NX05 1096 aaKnown RBP15.15■□□□□ 0.02
MKS1-204ENST00000537529 ATXN10Q9UBB4 475 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 GULP1Q9UBP9 304 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 C17orf113A0A1B0GUU1 675 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 EVPLLA8MZ36 301 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 CREG1O75629 220 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 NELFEP18615 380 aaKnown RBP15.15■□□□□ 0.02
MKS1-204ENST00000537529 ASMTP46597 345 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 E2F2Q14209 437 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 UGT8Q16880 541 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 KCTD21Q4G0X4 260 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 SPIN4Q56A73 249 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 C10orf62Q5T681 223 aaPredicted RBP15.15■□□□□ 0.02
MKS1-204ENST00000537529 MED27Q6P2C8 311 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 TTC33Q6PID6 262 aaPredicted RBP15.15■□□□□ 0.02
MKS1-204ENST00000537529 SLCO4C1Q6ZQN7 724 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 TMPRSS11BQ86T26 416 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 SFTPA1Q8IWL2 248 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 FAM86B1Q8N7N1 296 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 OR7G3Q8NG95 312 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 OR7A2PQ8NGA2 310 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 OR9A1PQ8NGU1 263 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 CDC26Q8NHZ8 85 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 NCSTNQ92542 709 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 TMBIM1Q969X1 311 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 RAB7BQ96AH8 199 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 SDCCAG3Q96C92 435 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 DGCR14Q96DF8 476 aaKnown RBP15.15■□□□□ 0.02
MKS1-204ENST00000537529 HDAC8Q9BY41 377 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 CARS2Q9HA77 564 aaKnown RBP15.15■□□□□ 0.02
MKS1-204ENST00000537529 NTN4Q9HB63 628 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 ITM2CQ9NQX7 267 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 DCAF13Q9NV06 445 aaKnown RBP15.15■□□□□ 0.02
MKS1-204ENST00000537529 DZANK1Q9NVP4 752 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 DNAJB9Q9UBS3 223 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 GPR34Q9UPC5 381 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 FADS3Q9Y5Q0 445 aa15.15■□□□□ 0.02
MKS1-204ENST00000537529 ENO4A6NNW6 628 aa15.14■□□□□ 0.01
MKS1-204ENST00000537529 MAGEB17A8MXT2 336 aa15.14■□□□□ 0.01
MKS1-204ENST00000537529 FPGTO14772 594 aa15.14■□□□□ 0.01
MKS1-204ENST00000537529 GNAO1P09471 354 aa15.14■□□□□ 0.01
MKS1-204ENST00000537529 IL1RNP18510 177 aa15.14■□□□□ 0.01
MKS1-204ENST00000537529 PON2Q15165 354 aa15.14■□□□□ 0.01
MKS1-204ENST00000537529 FAM109BQ6ICB4 259 aaPredicted RBP15.14■□□□□ 0.01
MKS1-204ENST00000537529 TMEM214Q6NUQ4 689 aaKnown RBP15.14■□□□□ 0.01
MKS1-204ENST00000537529 DOK6Q6PKX4 331 aa15.14■□□□□ 0.01
MKS1-204ENST00000537529 SLC30A9Q6PML9 568 aa15.14■□□□□ 0.01
MKS1-204ENST00000537529 CRTC3Q6UUV7 619 aa15.14■□□□□ 0.01
MKS1-204ENST00000537529 TRMT11Q7Z4G4 463 aaKnown RBP15.14■□□□□ 0.01
MKS1-204ENST00000537529 OR8J2Q8NGG1 315 aa15.14■□□□□ 0.01
MKS1-204ENST00000537529 NEIL2Q969S2 332 aa15.14■□□□□ 0.01
MKS1-204ENST00000537529 PANX1Q96RD7 426 aa15.14■□□□□ 0.01
MKS1-204ENST00000537529 PAPOLBQ9NRJ5 636 aaKnown RBP15.14■□□□□ 0.01
MKS1-204ENST00000537529 COMMD3-BMI1R4GMX3 469 aa15.14■□□□□ 0.01
MKS1-204ENST00000537529 A0A1B0GTW7 788 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 UPK1AO00322 258 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 POP7O75817 140 aaKnown RBP15.13■□□□□ 0.01
MKS1-204ENST00000537529 PRKD3O94806 890 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 OR6B1O95007 311 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 B3GALT4O96024 378 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 HPRP00739 348 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 ZNF8P17098 575 aaPredicted RBP15.13■□□□□ 0.01
MKS1-204ENST00000537529 FCARP24071 287 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 HPCAL1P37235 193 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 P2RY2P41231 377 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 ALDH3A2P51648 485 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 TUBA4AP68366 448 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 DAG1Q14118 895 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms