RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 CROCCQ5TZA2 2017 aa18.75■□□□□ 0.59
TNFRSF1B-204ENST00000536782 IGLV3-12A0A075B6K2 115 aa18.75■□□□□ 0.59
TNFRSF1B-204ENST00000536782 ARHGEF33A8MVX0 844 aa18.75■□□□□ 0.59
TNFRSF1B-204ENST00000536782 E5RI56 91 aa18.75■□□□□ 0.59
TNFRSF1B-204ENST00000536782 H0YGG7 62 aa18.75■□□□□ 0.59
TNFRSF1B-204ENST00000536782 ERGP11308 486 aa18.75■□□□□ 0.59
TNFRSF1B-204ENST00000536782 PAMP19021 973 aa18.75■□□□□ 0.59
TNFRSF1B-204ENST00000536782 OGNP20774 298 aaKnown RBP18.75■□□□□ 0.59
TNFRSF1B-204ENST00000536782 RPA3P35244 121 aaPredicted RBP18.75■□□□□ 0.59
TNFRSF1B-204ENST00000536782 ARF3P61204 181 aaPredicted RBP18.75■□□□□ 0.59
TNFRSF1B-204ENST00000536782 MFAP5Q13361 173 aa18.75■□□□□ 0.59
TNFRSF1B-204ENST00000536782 PRTGQ2VWP7 1150 aa18.75■□□□□ 0.59
TNFRSF1B-204ENST00000536782 VWA2Q5GFL6 755 aa18.75■□□□□ 0.59
TNFRSF1B-204ENST00000536782 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.75■□□□□ 0.59
TNFRSF1B-204ENST00000536782 ATG9BQ674R7 924 aa18.75■□□□□ 0.59
TNFRSF1B-204ENST00000536782 ZNF787Q6DD87 383 aa18.75■□□□□ 0.59
TNFRSF1B-204ENST00000536782 KIAA0930Q6ICG6 404 aaPredicted RBP18.75■□□□□ 0.59
TNFRSF1B-204ENST00000536782 SUSD1Q6UWL2 747 aa18.75■□□□□ 0.59
TNFRSF1B-204ENST00000536782 LINC00696Q6ZRV3 163 aa18.75■□□□□ 0.59
TNFRSF1B-204ENST00000536782 FAR1Q8WVX9 515 aa18.75■□□□□ 0.59
TNFRSF1B-204ENST00000536782 PLCD4Q9BRC7 762 aa18.75■□□□□ 0.59
TNFRSF1B-204ENST00000536782 MESP1Q9BRJ9 268 aa18.75■□□□□ 0.59
TNFRSF1B-204ENST00000536782 FAM114A2Q9NRY5 505 aa18.75■□□□□ 0.59
TNFRSF1B-204ENST00000536782 HOMER3Q9NSC5 361 aa18.75■□□□□ 0.59
TNFRSF1B-204ENST00000536782 GALPQ9UBC7 116 aa18.75■□□□□ 0.59
TNFRSF1B-204ENST00000536782 VPS9D1Q9Y2B5 631 aa18.75■□□□□ 0.59
TNFRSF1B-204ENST00000536782 TCRBV7S3A2A0A539 114 aa18.74■□□□□ 0.59
TNFRSF1B-204ENST00000536782 MYO1CO00159 1063 aa18.74■□□□□ 0.59
TNFRSF1B-204ENST00000536782 PRPF4O43172 522 aaKnown RBP eCLIP18.74■□□□□ 0.59
TNFRSF1B-204ENST00000536782 PSIP1O75475 530 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1B-204ENST00000536782 KLHL18O94889 574 aa18.74■□□□□ 0.59
TNFRSF1B-204ENST00000536782 CATP04040 527 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1B-204ENST00000536782 PKMP14618 531 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1B-204ENST00000536782 HSD17B2P37059 387 aa18.74■□□□□ 0.59
TNFRSF1B-204ENST00000536782 SARNPP82979 210 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1B-204ENST00000536782 TSTA3Q13630 321 aaPredicted RBP18.74■□□□□ 0.59
TNFRSF1B-204ENST00000536782 ARHGAP19Q14CB8 494 aa18.74■□□□□ 0.59
TNFRSF1B-204ENST00000536782 KLHL38Q2WGJ6 581 aa18.74■□□□□ 0.59
TNFRSF1B-204ENST00000536782 ACSBG2Q5FVE4 666 aa18.74■□□□□ 0.59
TNFRSF1B-204ENST00000536782 ARMC3Q5W041 872 aa18.74■□□□□ 0.59
TNFRSF1B-204ENST00000536782 NDUFAF7Q7L592 441 aa18.74■□□□□ 0.59
TNFRSF1B-204ENST00000536782 KBTBD2Q8IY47 623 aa18.74■□□□□ 0.59
TNFRSF1B-204ENST00000536782 C8orf44Q96CB5 159 aa18.74■□□□□ 0.59
TNFRSF1B-204ENST00000536782 MVB12AQ96EY5 273 aa18.74■□□□□ 0.59
TNFRSF1B-204ENST00000536782 YIPF2Q9BWQ6 316 aa18.74■□□□□ 0.59
TNFRSF1B-204ENST00000536782 LZTFL1Q9NQ48 299 aa18.74■□□□□ 0.59
TNFRSF1B-204ENST00000536782 UTP6Q9NYH9 597 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1B-204ENST00000536782 NSG1A0A0A6YYJ2 146 aa18.73■□□□□ 0.59
TNFRSF1B-204ENST00000536782 ZNF839A8K0R7 811 aa18.73■□□□□ 0.59
TNFRSF1B-204ENST00000536782 USP1O94782 785 aa18.73■□□□□ 0.59
TNFRSF1B-204ENST00000536782 CCNDBP1O95273 360 aa18.73■□□□□ 0.59
TNFRSF1B-204ENST00000536782 EDN3P14138 238 aa18.73■□□□□ 0.59
TNFRSF1B-204ENST00000536782 CXCR2P25025 360 aa18.73■□□□□ 0.59
TNFRSF1B-204ENST00000536782 DCTP40126 519 aa18.73■□□□□ 0.59
TNFRSF1B-204ENST00000536782 TERF1P54274 439 aa18.73■□□□□ 0.59
TNFRSF1B-204ENST00000536782 DSG2Q14126 1118 aa18.73■□□□□ 0.59
TNFRSF1B-204ENST00000536782 TRIP13Q15645 432 aaPredicted RBP18.73■□□□□ 0.59
TNFRSF1B-204ENST00000536782 NEPROQ6NW34 567 aa18.73■□□□□ 0.59
TNFRSF1B-204ENST00000536782 CASC4Q6P4E1 433 aa18.73■□□□□ 0.59
TNFRSF1B-204ENST00000536782 CENPUQ71F23 418 aa18.73■□□□□ 0.59
TNFRSF1B-204ENST00000536782 LAPTM4BQ86VI4 370 aa18.73■□□□□ 0.59
TNFRSF1B-204ENST00000536782 PAQR7Q86WK9 346 aa18.73■□□□□ 0.59
TNFRSF1B-204ENST00000536782 CILP2Q8IUL8 1156 aa18.73■□□□□ 0.59
TNFRSF1B-204ENST00000536782 CSNK1A1LQ8N752 337 aa18.73■□□□□ 0.59
TNFRSF1B-204ENST00000536782 PKP4Q99569 1192 aa18.73■□□□□ 0.59
TNFRSF1B-204ENST00000536782 TRPC4Q9UBN4 977 aa18.73■□□□□ 0.59
TNFRSF1B-204ENST00000536782 TAC3Q9UHF0 121 aa18.73■□□□□ 0.59
TNFRSF1B-204ENST00000536782 RUVBL1Q9Y265 456 aaKnown RBP18.73■□□□□ 0.59
TNFRSF1B-204ENST00000536782 IDSB3KWA1 339 aa18.72■□□□□ 0.59
TNFRSF1B-204ENST00000536782 E2F3O00716 465 aa18.72■□□□□ 0.59
TNFRSF1B-204ENST00000536782 CEP104O60308 925 aa18.72■□□□□ 0.59
TNFRSF1B-204ENST00000536782 AVILO75366 819 aa18.72■□□□□ 0.59
TNFRSF1B-204ENST00000536782 COX6A1P12074 109 aa18.72■□□□□ 0.59
TNFRSF1B-204ENST00000536782 FDXRP22570 491 aa18.72■□□□□ 0.59
TNFRSF1B-204ENST00000536782 PNLIPRP1P54315 467 aa18.72■□□□□ 0.59
TNFRSF1B-204ENST00000536782 EMP2P54851 167 aa18.72■□□□□ 0.59
TNFRSF1B-204ENST00000536782 PRDX1Q06830 199 aaKnown RBP18.72■□□□□ 0.59
TNFRSF1B-204ENST00000536782 KCNJ11Q14654 390 aa18.72■□□□□ 0.59
TNFRSF1B-204ENST00000536782 KCTD19Q17RG1 926 aaPredicted RBP18.72■□□□□ 0.59
TNFRSF1B-204ENST00000536782 HKDC1Q2TB90 917 aa18.72■□□□□ 0.59
TNFRSF1B-204ENST00000536782 GARNL3Q5VVW2 1013 aa18.72■□□□□ 0.59
TNFRSF1B-204ENST00000536782 ICE2Q659A1 982 aa18.72■□□□□ 0.59
TNFRSF1B-204ENST00000536782 RPUSD3Q6P087 351 aaKnown RBP18.72■□□□□ 0.59
TNFRSF1B-204ENST00000536782 FAM180AQ6UWF9 173 aa18.72■□□□□ 0.59
TNFRSF1B-204ENST00000536782 NEK10Q6ZWH5 1172 aa18.72■□□□□ 0.59
TNFRSF1B-204ENST00000536782 CATSPER1Q8NEC5 780 aa18.72■□□□□ 0.59
TNFRSF1B-204ENST00000536782 RERGQ96A58 199 aaPredicted RBP18.72■□□□□ 0.59
TNFRSF1B-204ENST00000536782 C14orf105Q9NVL8 296 aa18.72■□□□□ 0.59
TNFRSF1B-204ENST00000536782 INTS10Q9NVR2 710 aaKnown RBP18.72■□□□□ 0.59
TNFRSF1B-204ENST00000536782 SAMD15Q9P1V8 674 aa18.72■□□□□ 0.59
TNFRSF1B-204ENST00000536782 OSGIN2Q9Y236 505 aa18.72■□□□□ 0.59
TNFRSF1B-204ENST00000536782 HEATR5BQ9P2D3 2071 aa18.72■□□□□ 0.59
TNFRSF1B-204ENST00000536782 TEP1Q99973 2627 aaKnown RBP18.71■□□□□ 0.59
TNFRSF1B-204ENST00000536782 IGKV1-8A0A0C4DH67 115 aa18.71■□□□□ 0.59
TNFRSF1B-204ENST00000536782 DYTNA2CJ06 578 aa18.71■□□□□ 0.59
TNFRSF1B-204ENST00000536782 TXNDC9O14530 226 aa18.71■□□□□ 0.59
TNFRSF1B-204ENST00000536782 LRRTM2O43300 516 aa18.71■□□□□ 0.59
TNFRSF1B-204ENST00000536782 ANXA5P08758 320 aa18.71■□□□□ 0.59
TNFRSF1B-204ENST00000536782 CCDC175P0C221 793 aa18.71■□□□□ 0.59
TNFRSF1B-204ENST00000536782 PRR35P0CG20 571 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms