RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 HOXC11O43248 304 aaPredicted RBP5.28□□□□□ -1.56
CLIP1-207ENST00000536634 ZIC3O60481 467 aa5.28□□□□□ -1.56
CLIP1-207ENST00000536634 NEMFO60524 1076 aa5.28□□□□□ -1.56
CLIP1-207ENST00000536634 IGHV4-30-4P0DP06 118 aa5.28□□□□□ -1.56
CLIP1-207ENST00000536634 ODC1P11926 461 aa5.28□□□□□ -1.56
CLIP1-207ENST00000536634 KRT10P13645 584 aa5.28□□□□□ -1.56
CLIP1-207ENST00000536634 TNFSF9P41273 254 aa5.28□□□□□ -1.56
CLIP1-207ENST00000536634 PEX3P56589 373 aa5.28□□□□□ -1.56
CLIP1-207ENST00000536634 ERVFC1-1P60608 527 aa5.28□□□□□ -1.56
CLIP1-207ENST00000536634 UFM1P61960 85 aa5.28□□□□□ -1.56
CLIP1-207ENST00000536634 RPP30P78346 268 aaKnown RBP5.28□□□□□ -1.56
CLIP1-207ENST00000536634 RPL36AP83881 106 aaKnown RBP5.28□□□□□ -1.56
CLIP1-207ENST00000536634 KDSRQ06136 332 aa5.28□□□□□ -1.56
CLIP1-207ENST00000536634 DLG1Q12959 904 aa5.28□□□□□ -1.56
CLIP1-207ENST00000536634 GPR68Q15743 365 aa5.28□□□□□ -1.56
CLIP1-207ENST00000536634 TMEM95Q3KNT9 176 aa5.28□□□□□ -1.56
CLIP1-207ENST00000536634 MMEL1Q495T6 779 aa5.28□□□□□ -1.56
CLIP1-207ENST00000536634 ARMCX5Q6P1M9 558 aa5.28□□□□□ -1.56
CLIP1-207ENST00000536634 ZC3HC1Q86WB0 502 aaKnown RBP5.28□□□□□ -1.56
CLIP1-207ENST00000536634 NR2C2APQ86WQ0 139 aa5.28□□□□□ -1.56
CLIP1-207ENST00000536634 C11orf65Q8NCR3 313 aa5.28□□□□□ -1.56
CLIP1-207ENST00000536634 MRPS31Q92665 395 aaKnown RBP5.28□□□□□ -1.56
CLIP1-207ENST00000536634 APOPT1Q96IL0 206 aa5.28□□□□□ -1.56
CLIP1-207ENST00000536634 IFT74Q96LB3 600 aa5.28□□□□□ -1.56
CLIP1-207ENST00000536634 BBS4Q96RK4 519 aa5.28□□□□□ -1.56
CLIP1-207ENST00000536634 TCHPQ9BT92 498 aa5.28□□□□□ -1.56
CLIP1-207ENST00000536634 ZNF556Q9HAH1 456 aa5.28□□□□□ -1.56
CLIP1-207ENST00000536634 TUFT1Q9NNX1 390 aa5.28□□□□□ -1.56
CLIP1-207ENST00000536634 MALT1Q9UDY8 824 aa5.28□□□□□ -1.56
CLIP1-207ENST00000536634 CDC14AQ9UNH5 594 aa5.28□□□□□ -1.56
CLIP1-207ENST00000536634 SPTBN1Q01082 2364 aaKnown RBP5.28□□□□□ -1.56
CLIP1-207ENST00000536634 DOPEY1Q5JWR5 2465 aa5.28□□□□□ -1.56
CLIP1-207ENST00000536634 MYH11P35749 1972 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 CREBBPQ92793 2442 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 STK36Q9NRP7 1315 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 CRYBG3Q68DQ2 2970 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 TRAV19A0A0A6YYK7 116 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 TEX13CA0A0J9YWL9 993 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 A0A1W2PQF6 199 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 CPLX1O14810 134 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 LDLRAD4O15165 306 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 BCAT2O15382 392 aaPredicted RBP5.27□□□□□ -1.57
CLIP1-207ENST00000536634 FAM189A1O60320 539 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 NOL4O94818 638 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 NDUFB4O95168 129 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 ETFAP13804 333 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 CYP3A5P20815 502 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 AGAP20933 346 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 BRWD1-AS2P59051 145 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 ITGADQ13349 1161 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 SNTA1Q13424 505 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 SGO1Q5FBB7 561 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 EOGTQ5NDL2 527 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 PAPPA-AS1Q5QFB9 102 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 SLC36A4Q6YBV0 504 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 NEK10Q6ZWH5 1172 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 RABEPKQ7Z6M1 372 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 TDRPQ86YL5 185 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 ZCCHC9Q8N567 271 aaKnown RBP5.27□□□□□ -1.57
CLIP1-207ENST00000536634 CCDC26Q8TAB7 109 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 SPPL2BQ8TCT7 592 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 KIFAP3Q92845 792 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 FBXL8Q96CD0 374 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 NAP1L4Q99733 375 aaKnown RBP5.27□□□□□ -1.57
CLIP1-207ENST00000536634 PI4K2AQ9BTU6 479 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 TMEM206Q9H813 350 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 UBQLN1Q9UMX0 589 aaKnown RBP5.27□□□□□ -1.57
CLIP1-207ENST00000536634 ARHGAP26Q9UNA1 814 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 NFS1Q9Y697 457 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 SLCO1B1Q9Y6L6 691 aa5.27□□□□□ -1.57
CLIP1-207ENST00000536634 TP53BP1Q12888 1972 aaPredicted RBP5.27□□□□□ -1.57
CLIP1-207ENST00000536634 PIRO00625 290 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 CYB561D2O14569 222 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 CAPN9O14815 690 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 SLC16A4O15374 487 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 SLC16A5O15375 505 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 HCRTO43612 131 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 TOM1L1O75674 476 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 KDM4BO94953 1096 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 CTDNEP1O95476 244 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 APODP05090 189 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 CSH1P0DML2 217 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 CSH2P0DML3 217 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 HLA-EP13747 358 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 CYP2F1P24903 491 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 RPA1P27694 616 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 CHATP28329 748 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 HNRNPH1P31943 449 aaKnown RBP5.26□□□□□ -1.57
CLIP1-207ENST00000536634 KRT2P35908 639 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 TUBP50607 506 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 SEMG2Q02383 582 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 RNPS1Q15287 305 aaKnown RBP5.26□□□□□ -1.57
CLIP1-207ENST00000536634 PRICKLE4Q2TBC4 344 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 HLA-BQ31612 363 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 SLC9B1Q4ZJI4 515 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 SPATA1Q5VX52 437 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 WSCD1Q658N2 575 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 HIST2H2BCQ6DN03 193 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 HIST2H2BDQ6DRA6 164 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 JADE1Q6IE81 842 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms