RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 ZNF749O43361 778 aa17.14■□□□□ 0.33
DDX55-204ENST00000536079 MED26O95402 600 aa17.14■□□□□ 0.33
DDX55-204ENST00000536079 F8A1P23610 371 aa17.14■□□□□ 0.33
DDX55-204ENST00000536079 GLRBP48167 497 aa17.14■□□□□ 0.33
DDX55-204ENST00000536079 SERPINB9P50453 376 aa17.14■□□□□ 0.33
DDX55-204ENST00000536079 ITGA1P56199 1179 aa17.14■□□□□ 0.33
DDX55-204ENST00000536079 SNRPNP63162 240 aaKnown RBP17.14■□□□□ 0.33
DDX55-204ENST00000536079 CDKL1Q00532 357 aa17.14■□□□□ 0.33
DDX55-204ENST00000536079 GPS2Q13227 327 aa17.14■□□□□ 0.33
DDX55-204ENST00000536079 FAM199XQ6PEV8 388 aaPredicted RBP17.14■□□□□ 0.33
DDX55-204ENST00000536079 C6orf15Q6UXA7 325 aaPredicted RBP17.14■□□□□ 0.33
DDX55-204ENST00000536079 RNF44Q7L0R7 432 aa17.14■□□□□ 0.33
DDX55-204ENST00000536079 TBC1D1Q86TI0 1168 aaPredicted RBP17.14■□□□□ 0.33
DDX55-204ENST00000536079 BPHLQ86WA6 291 aaPredicted RBP17.14■□□□□ 0.33
DDX55-204ENST00000536079 GPSM1Q86YR5 675 aa17.14■□□□□ 0.33
DDX55-204ENST00000536079 CACNA2D3Q8IZS8 1091 aa17.14■□□□□ 0.33
DDX55-204ENST00000536079 NLGN4XQ8N0W4 816 aa17.14■□□□□ 0.33
DDX55-204ENST00000536079 DTWD1Q8N5C7 304 aa17.14■□□□□ 0.33
DDX55-204ENST00000536079 ZNF655Q8N720 491 aaPredicted RBP17.14■□□□□ 0.33
DDX55-204ENST00000536079 NLGN4YQ8NFZ3 816 aaPredicted RBP17.14■□□□□ 0.33
DDX55-204ENST00000536079 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.14■□□□□ 0.33
DDX55-204ENST00000536079 EXT2Q93063 718 aa17.14■□□□□ 0.33
DDX55-204ENST00000536079 ZNF285Q96NJ3 590 aa17.14■□□□□ 0.33
DDX55-204ENST00000536079 ATOH8Q96SQ7 321 aa17.14■□□□□ 0.33
DDX55-204ENST00000536079 RUFY1Q96T51 708 aa17.14■□□□□ 0.33
DDX55-204ENST00000536079 FANCEQ9HB96 536 aa17.14■□□□□ 0.33
DDX55-204ENST00000536079 CPNE5Q9HCH3 593 aa17.14■□□□□ 0.33
DDX55-204ENST00000536079 SERTAD3Q9UJW9 196 aa17.14■□□□□ 0.33
DDX55-204ENST00000536079 IKBKGQ9Y6K9 419 aa17.14■□□□□ 0.33
DDX55-204ENST00000536079 ANKRD12Q6UB98 2062 aa17.14■□□□□ 0.33
DDX55-204ENST00000536079 UBXN8O00124 270 aa17.13■□□□□ 0.33
DDX55-204ENST00000536079 RFPL1O75677 317 aa17.13■□□□□ 0.33
DDX55-204ENST00000536079 OR2B3O76000 313 aa17.13■□□□□ 0.33
DDX55-204ENST00000536079 ANXA5P08758 320 aa17.13■□□□□ 0.33
DDX55-204ENST00000536079 CDH1P12830 882 aa17.13■□□□□ 0.33
DDX55-204ENST00000536079 LIFP15018 202 aa17.13■□□□□ 0.33
DDX55-204ENST00000536079 GCGRP47871 477 aa17.13■□□□□ 0.33
DDX55-204ENST00000536079 SLC6A12P48065 614 aa17.13■□□□□ 0.33
DDX55-204ENST00000536079 ABATP80404 500 aa17.13■□□□□ 0.33
DDX55-204ENST00000536079 CAPN13Q6MZZ7 669 aaPredicted RBP17.13■□□□□ 0.33
DDX55-204ENST00000536079 LCTLQ6UWM7 567 aa17.13■□□□□ 0.33
DDX55-204ENST00000536079 FRA10AC1Q70Z53 315 aa17.13■□□□□ 0.33
DDX55-204ENST00000536079 CYP4X1Q8N118 509 aa17.13■□□□□ 0.33
DDX55-204ENST00000536079 OR8K5Q8NH50 307 aa17.13■□□□□ 0.33
DDX55-204ENST00000536079 OR2W6PQ8NHA6 318 aa17.13■□□□□ 0.33
DDX55-204ENST00000536079 MZB1Q8WU39 189 aa17.13■□□□□ 0.33
DDX55-204ENST00000536079 EGFL8Q99944 293 aa17.13■□□□□ 0.33
DDX55-204ENST00000536079 SPNS1Q9H2V7 528 aa17.13■□□□□ 0.33
DDX55-204ENST00000536079 NMRAL1Q9HBL8 299 aa17.13■□□□□ 0.33
DDX55-204ENST00000536079 TLK1Q9UKI8 766 aa17.13■□□□□ 0.33
DDX55-204ENST00000536079 E7EQ34 232 aa17.12■□□□□ 0.33
DDX55-204ENST00000536079 H0YGG7 62 aa17.12■□□□□ 0.33
DDX55-204ENST00000536079 TERTO14746 1132 aaKnown RBP17.12■□□□□ 0.33
DDX55-204ENST00000536079 MAP3K7O43318 606 aa17.12■□□□□ 0.33
DDX55-204ENST00000536079 KRT38O76015 456 aa17.12■□□□□ 0.33
DDX55-204ENST00000536079 KLHL2O95198 593 aa17.12■□□□□ 0.33
DDX55-204ENST00000536079 STATHP02808 62 aa17.12■□□□□ 0.33
DDX55-204ENST00000536079 SNRPAP09012 282 aaKnown RBP17.12■□□□□ 0.33
DDX55-204ENST00000536079 MTHFD2P13995 350 aa17.12■□□□□ 0.33
DDX55-204ENST00000536079 RORAP35398 523 aa17.12■□□□□ 0.33
DDX55-204ENST00000536079 SLC26A3P40879 764 aa17.12■□□□□ 0.33
DDX55-204ENST00000536079 STAT5AP42229 794 aa17.12■□□□□ 0.33
DDX55-204ENST00000536079 SLCO1A2P46721 670 aa17.12■□□□□ 0.33
DDX55-204ENST00000536079 VSX2P58304 361 aaPredicted RBP17.12■□□□□ 0.33
DDX55-204ENST00000536079 ARF3P61204 181 aaPredicted RBP17.12■□□□□ 0.33
DDX55-204ENST00000536079 CSNK1G2P78368 415 aa17.12■□□□□ 0.33
DDX55-204ENST00000536079 MAP7Q14244 749 aa17.12■□□□□ 0.33
DDX55-204ENST00000536079 CATSPEREQ5SY80 951 aa17.12■□□□□ 0.33
DDX55-204ENST00000536079 LRRC69Q6ZNQ3 347 aa17.12■□□□□ 0.33
DDX55-204ENST00000536079 THOC6Q86W42 341 aaKnown RBP17.12■□□□□ 0.33
DDX55-204ENST00000536079 ATL1Q8WXF7 558 aa17.12■□□□□ 0.33
DDX55-204ENST00000536079 N4BP2L2Q92802 583 aaPredicted RBP17.12■□□□□ 0.33
DDX55-204ENST00000536079 NEIL2Q969S2 332 aa17.12■□□□□ 0.33
DDX55-204ENST00000536079 TSNARE1Q96NA8 513 aa17.12■□□□□ 0.33
DDX55-204ENST00000536079 OR2A5Q96R48 311 aa17.12■□□□□ 0.33
DDX55-204ENST00000536079 SELENOSQ9BQE4 189 aa17.12■□□□□ 0.33
DDX55-204ENST00000536079 RRAGDQ9NQL2 400 aaPredicted RBP17.12■□□□□ 0.33
DDX55-204ENST00000536079 PCMTD2Q9NV79 361 aa17.12■□□□□ 0.33
DDX55-204ENST00000536079 DHCR7Q9UBM7 475 aaKnown RBP17.12■□□□□ 0.33
DDX55-204ENST00000536079 IL17BQ9UHF5 180 aa17.12■□□□□ 0.33
DDX55-204ENST00000536079 PTBP2Q9UKA9 531 aaKnown RBP17.12■□□□□ 0.33
DDX55-204ENST00000536079 RAB21Q9UL25 225 aa17.12■□□□□ 0.33
DDX55-204ENST00000536079 RNF112Q9ULX5 631 aa17.12■□□□□ 0.33
DDX55-204ENST00000536079 SLC22A14Q9Y267 594 aa17.12■□□□□ 0.33
DDX55-204ENST00000536079 PCDHB3Q9Y5E6 796 aa17.12■□□□□ 0.33
DDX55-204ENST00000536079 MRPS18BQ9Y676 258 aaKnown RBP17.12■□□□□ 0.33
DDX55-204ENST00000536079 FEZF1A0PJY2 475 aa17.11■□□□□ 0.33
DDX55-204ENST00000536079 PABPN1LA6NDY0 278 aaKnown RBP17.11■□□□□ 0.33
DDX55-204ENST00000536079 P2RX6O15547 441 aa17.11■□□□□ 0.33
DDX55-204ENST00000536079 LCMT2O60294 686 aaKnown RBP17.11■□□□□ 0.33
DDX55-204ENST00000536079 PRAMEF4O60810 478 aa17.11■□□□□ 0.33
DDX55-204ENST00000536079 KERAO60938 352 aa17.11■□□□□ 0.33
DDX55-204ENST00000536079 CPNE3O75131 537 aaKnown RBP17.11■□□□□ 0.33
DDX55-204ENST00000536079 CCNDBP1O95273 360 aa17.11■□□□□ 0.33
DDX55-204ENST00000536079 CNTFP26441 200 aa17.11■□□□□ 0.33
DDX55-204ENST00000536079 AGTR2P50052 363 aa17.11■□□□□ 0.33
DDX55-204ENST00000536079 MEF2AQ02078 507 aaPredicted RBP17.11■□□□□ 0.33
DDX55-204ENST00000536079 COL28A1Q2UY09 1125 aa17.11■□□□□ 0.33
DDX55-204ENST00000536079 TAF1BQ53T94 588 aaPredicted RBP17.11■□□□□ 0.33
DDX55-204ENST00000536079 ZC3H12BQ5HYM0 836 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms