RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 CFPP27918 469 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 PSMB4P28070 264 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 GABRB3P28472 473 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 RYKP34925 604 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 IDUAP35475 653 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 UGT2B10P36537 528 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 ARCN1P48444 511 aaKnown RBP6.43□□□□□ -1.38
USP28-202ENST00000535607 MRPL19P49406 292 aaKnown RBP6.43□□□□□ -1.38
USP28-202ENST00000535607 ALDH7A1P49419 539 aaKnown RBP6.43□□□□□ -1.38
USP28-202ENST00000535607 ARSFP54793 590 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 CXCR4P61073 352 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 RBP5P82980 135 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 SP4Q02446 784 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 GBE1Q04446 702 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 ZNF33AQ06730 810 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 INCA1Q0VD86 236 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 TRAF3Q13114 568 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 FADDQ13158 208 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 NFYCQ13952 458 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 E2F2Q14209 437 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 GRM3Q14832 879 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 PAFAH1B3Q15102 231 aaKnown RBP6.43□□□□□ -1.38
USP28-202ENST00000535607 DLG2Q15700 870 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 TRIM71Q2Q1W2 868 aaKnown RBP6.43□□□□□ -1.38
USP28-202ENST00000535607 C15orf59Q2T9L4 293 aaPredicted RBP6.43□□□□□ -1.38
USP28-202ENST00000535607 GOLGA7BQ2TAP0 167 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 PGS1Q32NB8 556 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 PAGE2BQ5JRK9 111 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 PCID2Q5JVF3 399 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 C6orf141Q5SZD1 244 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 NCBP2-AS2Q69YL0 99 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 PNCKQ6P2M8 343 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 FBXO46Q6PJ61 603 aaPredicted RBP6.43□□□□□ -1.38
USP28-202ENST00000535607 XKRXQ6PP77 449 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 LAYNQ6UX15 382 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 CYP4V2Q6ZWL3 525 aaPredicted RBP6.43□□□□□ -1.38
USP28-202ENST00000535607 USP45Q70EL2 814 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 R3HCC1LQ7Z5L2 792 aaKnown RBP6.43□□□□□ -1.38
USP28-202ENST00000535607 CUZD1Q86UP6 607 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 ADHFE1Q8IWW8 467 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 DCP1BQ8IZD4 617 aaKnown RBP6.43□□□□□ -1.38
USP28-202ENST00000535607 OFCC1Q8IZS5 231 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 LSMEM2Q8N112 164 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 EID3Q8N140 333 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 POC5Q8NA72 575 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 PCSK9Q8NBP7 692 aaKnown RBP6.43□□□□□ -1.38
USP28-202ENST00000535607 KBTBD8Q8NFY9 601 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 OR13J1Q8NGT2 312 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 RHOXF1Q8NHV9 184 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 MCFD2Q8NI22 146 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 IPCEF1Q8WWN9 437 aaPredicted RBP6.43□□□□□ -1.38
USP28-202ENST00000535607 CENPIQ92674 756 aaPredicted RBP6.43□□□□□ -1.38
USP28-202ENST00000535607 TANKQ92844 425 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 ZNF566Q969W8 418 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 TMEM143Q96AN5 459 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 LRRC58Q96CX6 371 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 C19orf60Q96EN9 201 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 P2RY11Q96G91 374 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 ATXN7L3BQ96GX2 97 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 CPB2Q96IY4 423 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 MARK4Q96L34 752 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 UBXN10Q96LJ8 280 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 MUS81Q96NY9 551 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 LMF1Q96S06 567 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 PCYT2Q99447 389 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 ARPC5LQ9BPX5 153 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 HERC2P3Q9BVR0 1158 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 CCDC90BQ9GZT6 254 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 XYLT2Q9H1B5 865 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 ZCCHC4Q9H5U6 513 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 ATP13A3Q9H7F0 1226 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 MSL2Q9HCI7 577 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 LANCL2Q9NS86 450 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 SETD4Q9NVD3 440 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 MTMR10Q9NXD2 777 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 ING3Q9NXR8 418 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.43□□□□□ -1.38
USP28-202ENST00000535607 DNAJB9Q9UBS3 223 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 CYTH4Q9UIA0 394 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 MKLN1Q9UL63 735 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 CFAP20Q9Y6A4 193 aaKnown RBP6.43□□□□□ -1.38
USP28-202ENST00000535607 SCN10AQ9Y5Y9 1956 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 ZCWPW2A0A1B0GU75 182 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 A0A1W2PP18 115 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 RRN3P2A6NIE6 340 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 CLDN24A6NM45 220 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 TARM1B6A8C7 271 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 NME4O00746 187 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 DLGAP1O14490 977 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 CD3EAPO15446 510 aaKnown RBP6.42□□□□□ -1.38
USP28-202ENST00000535607 DFNA5O60443 496 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 TPST1O60507 370 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 SNAP29O95721 258 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 NDST3O95803 873 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 ANXA6P08133 673 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 FGF4P08620 206 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 POU2F2P09086 479 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 SLC35E2BP0CK96 405 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 CHRNB1P11230 501 aa6.42□□□□□ -1.38
USP28-202ENST00000535607 PCNAP12004 261 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms