RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 CCDC3Q9BQI4 270 aa4.31□□□□□ -1.72
PRKDC-205ENST00000535375 GPR88Q9GZN0 384 aa4.31□□□□□ -1.72
PRKDC-205ENST00000535375 MED20Q9H944 212 aa4.31□□□□□ -1.72
PRKDC-205ENST00000535375 WDR83OSQ9Y284 106 aa4.31□□□□□ -1.72
PRKDC-205ENST00000535375 CSNK1G3Q9Y6M4 447 aa4.31□□□□□ -1.72
PRKDC-205ENST00000535375 SYNDIG1LA6NDD5 238 aa4.3□□□□□ -1.72
PRKDC-205ENST00000535375 SNURFLB1AK76 121 aa4.3□□□□□ -1.72
PRKDC-205ENST00000535375 ACADSP16219 412 aa4.3□□□□□ -1.72
PRKDC-205ENST00000535375 RPL35AP18077 110 aaKnown RBP4.3□□□□□ -1.72
PRKDC-205ENST00000535375 SHC1P29353 583 aa4.3□□□□□ -1.72
PRKDC-205ENST00000535375 TMEM50BP56557 158 aa4.3□□□□□ -1.72
PRKDC-205ENST00000535375 GSCP56915 257 aaPredicted RBP4.3□□□□□ -1.72
PRKDC-205ENST00000535375 RALGDSQ12967 914 aa4.3□□□□□ -1.72
PRKDC-205ENST00000535375 SGCGQ13326 291 aa4.3□□□□□ -1.72
PRKDC-205ENST00000535375 PRPF4BQ13523 1007 aaKnown RBP4.3□□□□□ -1.72
PRKDC-205ENST00000535375 MOGAT2Q3SYC2 334 aa4.3□□□□□ -1.72
PRKDC-205ENST00000535375 OR4A47Q6IF82 309 aa4.3□□□□□ -1.72
PRKDC-205ENST00000535375 NOTUMQ6P988 496 aa4.3□□□□□ -1.72
PRKDC-205ENST00000535375 PAQR6Q6TCH4 344 aa4.3□□□□□ -1.72
PRKDC-205ENST00000535375 ENOSF1Q7L5Y1 443 aa4.3□□□□□ -1.72
PRKDC-205ENST00000535375 CHMP1BQ7LBR1 199 aa4.3□□□□□ -1.72
PRKDC-205ENST00000535375 PRPF39Q86UA1 669 aaKnown RBP4.3□□□□□ -1.72
PRKDC-205ENST00000535375 CCDC89Q8N998 374 aa4.3□□□□□ -1.72
PRKDC-205ENST00000535375 PANK3Q9H999 370 aa4.3□□□□□ -1.72
PRKDC-205ENST00000535375 PA2G4Q9UQ80 394 aaKnown RBP4.3□□□□□ -1.72
PRKDC-205ENST00000535375 A0A1W2PPM1 405 aa4.29□□□□□ -1.72
PRKDC-205ENST00000535375 TRBC2A0A5B9 178 aa4.29□□□□□ -1.72
PRKDC-205ENST00000535375 MEX3AA1L020 520 aaKnown RBP4.29□□□□□ -1.72
PRKDC-205ENST00000535375 FPGTO14772 594 aa4.29□□□□□ -1.72
PRKDC-205ENST00000535375 IDH3BO43837 385 aa4.29□□□□□ -1.72
PRKDC-205ENST00000535375 GATA1P15976 413 aaPredicted RBP4.29□□□□□ -1.72
PRKDC-205ENST00000535375 DNA2P51530 1060 aa4.29□□□□□ -1.72
PRKDC-205ENST00000535375 XGP55808 180 aa4.29□□□□□ -1.72
PRKDC-205ENST00000535375 TRAP1Q12931 704 aaKnown RBP4.29□□□□□ -1.72
PRKDC-205ENST00000535375 BECN1Q14457 450 aa4.29□□□□□ -1.72
PRKDC-205ENST00000535375 TOMM20Q15388 145 aa4.29□□□□□ -1.72
PRKDC-205ENST00000535375 ARMC4Q5T2S8 1044 aa4.29□□□□□ -1.72
PRKDC-205ENST00000535375 OR10Q1Q8NGQ4 319 aa4.29□□□□□ -1.72
PRKDC-205ENST00000535375 KCNE4Q8WWG9 221 aa4.29□□□□□ -1.72
PRKDC-205ENST00000535375 FEVQ99581 238 aa4.29□□□□□ -1.72
PRKDC-205ENST00000535375 CPNE1Q99829 537 aa4.29□□□□□ -1.72
PRKDC-205ENST00000535375 TBC1D7Q9P0N9 293 aa4.29□□□□□ -1.72
PRKDC-205ENST00000535375 TXNDC16Q9P2K2 825 aa4.29□□□□□ -1.72
PRKDC-205ENST00000535375 MUTYHQ9UIF7 546 aa4.29□□□□□ -1.72
PRKDC-205ENST00000535375 MPTX1A8MV57 137 aa4.28□□□□□ -1.72
PRKDC-205ENST00000535375 CLDN4O14493 209 aa4.28□□□□□ -1.72
PRKDC-205ENST00000535375 SOCS3O14543 225 aa4.28□□□□□ -1.72
PRKDC-205ENST00000535375 TEX28O15482 410 aa4.28□□□□□ -1.72
PRKDC-205ENST00000535375 TADA2AO75478 443 aa4.28□□□□□ -1.72
PRKDC-205ENST00000535375 RPS6KA5O75582 802 aa4.28□□□□□ -1.72
PRKDC-205ENST00000535375 ATP5BP06576 529 aaKnown RBP4.28□□□□□ -1.72
PRKDC-205ENST00000535375 GP1BBP13224 206 aa4.28□□□□□ -1.72
PRKDC-205ENST00000535375 CD22P20273 847 aa4.28□□□□□ -1.72
PRKDC-205ENST00000535375 CSNK2BP67870 215 aa4.28□□□□□ -1.72
PRKDC-205ENST00000535375 PTPN14Q15678 1187 aa4.28□□□□□ -1.72
PRKDC-205ENST00000535375 MFSD4BQ5TF39 518 aa4.28□□□□□ -1.72
PRKDC-205ENST00000535375 CES4AQ5XG92 561 aa4.28□□□□□ -1.72
PRKDC-205ENST00000535375 NAA16Q6N069 864 aaPredicted RBP4.28□□□□□ -1.72
PRKDC-205ENST00000535375 KIF6Q6ZMV9 814 aa4.28□□□□□ -1.72
PRKDC-205ENST00000535375 TDRD5Q8NAT2 981 aaKnown RBP4.28□□□□□ -1.72
PRKDC-205ENST00000535375 METTL21AQ8WXB1 218 aa4.28□□□□□ -1.72
PRKDC-205ENST00000535375 ERP27Q96DN0 273 aa4.28□□□□□ -1.72
PRKDC-205ENST00000535375 Q9H8V8 135 aa4.28□□□□□ -1.72
PRKDC-205ENST00000535375 B3GAT2Q9NPZ5 323 aa4.28□□□□□ -1.72
PRKDC-205ENST00000535375 RPS10P5Q9NQ39 176 aa4.28□□□□□ -1.72
PRKDC-205ENST00000535375 KLK13Q9UKR3 277 aa4.28□□□□□ -1.72
PRKDC-205ENST00000535375 ZHX2Q9Y6X8 837 aa4.28□□□□□ -1.72
PRKDC-205ENST00000535375 COL5A2P05997 1499 aaPredicted RBP4.28□□□□□ -1.72
PRKDC-205ENST00000535375 IGSF1Q8N6C5 1336 aa4.27□□□□□ -1.73
PRKDC-205ENST00000535375 PTGESO14684 152 aa4.27□□□□□ -1.73
PRKDC-205ENST00000535375 SNX3O60493 162 aa4.27□□□□□ -1.73
PRKDC-205ENST00000535375 PSMD10O75832 226 aa4.27□□□□□ -1.73
PRKDC-205ENST00000535375 ACSL3O95573 720 aa4.27□□□□□ -1.73
PRKDC-205ENST00000535375 RAD52P43351 418 aa4.27□□□□□ -1.73
PRKDC-205ENST00000535375 POLR2LP62875 67 aaKnown RBP4.27□□□□□ -1.73
PRKDC-205ENST00000535375 CALCOCO2Q13137 446 aa4.27□□□□□ -1.73
PRKDC-205ENST00000535375 NFATC2Q13469 925 aa4.27□□□□□ -1.73
PRKDC-205ENST00000535375 CDH18Q13634 790 aa4.27□□□□□ -1.73
PRKDC-205ENST00000535375 TRIM29Q14134 588 aa4.27□□□□□ -1.73
PRKDC-205ENST00000535375 NPTX1Q15818 432 aa4.27□□□□□ -1.73
PRKDC-205ENST00000535375 EXT1Q16394 746 aa4.27□□□□□ -1.73
PRKDC-205ENST00000535375 TMEM266Q2M3C6 531 aa4.27□□□□□ -1.73
PRKDC-205ENST00000535375 GLIPR1L2Q4G1C9 344 aa4.27□□□□□ -1.73
PRKDC-205ENST00000535375 LEKR1Q6ZMV7 388 aa4.27□□□□□ -1.73
PRKDC-205ENST00000535375 KLHDC1Q8N7A1 406 aa4.27□□□□□ -1.73
PRKDC-205ENST00000535375 OR5T2Q8NGG2 359 aa4.27□□□□□ -1.73
PRKDC-205ENST00000535375 OR2L2Q8NH16 312 aa4.27□□□□□ -1.73
PRKDC-205ENST00000535375 PROX1Q92786 737 aa4.27□□□□□ -1.73
PRKDC-205ENST00000535375 OTUB1Q96FW1 271 aaPredicted RBP4.27□□□□□ -1.73
PRKDC-205ENST00000535375 AGAP4Q96P64 663 aa4.27□□□□□ -1.73
PRKDC-205ENST00000535375 GSN-AS1Q9NRJ2 163 aa4.27□□□□□ -1.73
PRKDC-205ENST00000535375 NDE1Q9NXR1 346 aa4.27□□□□□ -1.73
PRKDC-205ENST00000535375 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.27□□□□□ -1.73
PRKDC-205ENST00000535375 SELENOKQ9Y6D0 94 aa4.27□□□□□ -1.73
PRKDC-205ENST00000535375 A0A087WUV0 522 aaPredicted RBP4.26□□□□□ -1.73
PRKDC-205ENST00000535375 A0A1B0GVY2 172 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 CASTOR2A6NHX0 329 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 ASB14A6NK59 587 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 FIBPO43427 364 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 KRT33AO76009 404 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms