RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 SLC30A3Q99726 388 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 CUTCQ9NTM9 273 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 INTS10Q9NVR2 710 aaKnown RBP9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 P4HTMQ9NXG6 502 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 IL1RAPL1Q9NZN1 696 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 KLHL42Q9P2K6 505 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 NTNG1Q9Y2I2 539 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 LOC105369274A0A096LPK9 316 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 IGKV1-8A0A0C4DH67 115 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 LOC102723532A0A0G2JNH3 316 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 SDR42E2A6NKP2 422 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 AGPSO00116 658 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 MASP2O00187 686 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 SOCS6O14544 535 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 PFDN6O15212 129 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 USP1O94782 785 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 PIM1P11309 404 aaPredicted RBP9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 COX6B1P14854 86 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 PAMP19021 973 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 CHRM3P20309 590 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 ALAS2P22557 587 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 MMP11P24347 488 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 VPS41P49754 854 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 DHX34Q14147 1143 aaKnown RBP9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 GRM7Q14831 915 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 MYBPC3Q14896 1274 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 SLC9A5Q14940 896 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 ARHGAP19Q14CB8 494 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 KLHL38Q2WGJ6 581 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 FAM214AQ32MH5 1076 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 WASHC2DQ5SRD0 308 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 FRMPD2BQ6IN97 320 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 ZNF549Q6P9A3 640 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 CNSTQ6PJW8 725 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 CCDC137Q6PK04 289 aaKnown RBP9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 SPNS3Q6ZMD2 512 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 CYHR1Q6ZMK1 362 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 OR4N4Q8N0Y3 316 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 GALNT16Q8N428 558 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 ARHGEF39Q8N4T4 335 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 NAT8LQ8N9F0 302 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 FBXO15Q8NCQ5 510 aaPredicted RBP9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 GIMAP7Q8NHV1 300 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 GSDMBQ8TAX9 411 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 MAGOHBQ96A72 148 aaKnown RBP9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 BARD1Q99728 777 aaKnown RBP9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 MIPEPQ99797 713 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 SELENOSQ9BQE4 189 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 SYNPO2LQ9H987 977 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 TACC2O95359 2948 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 ABCA2Q9BZC7 2435 aa9.61□□□□□ -0.87
CLSTN3-203ENST00000534830 DCHS2Q6V1P9 2916 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 IGLV3-12A0A075B6K2 115 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 GFYI3L273 518 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 PEX12O00623 359 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 ALPPP05187 535 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 OR1D4P47884 311 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 TERF1P54274 439 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 EMP3P54852 163 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 VSX2P58304 361 aaPredicted RBP9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 TIAL1Q01085 375 aaKnown RBP eCLIP9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 RELAQ04206 551 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 CTBP1Q13363 440 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 ART3Q13508 389 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 TESK1Q15569 626 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 PRTGQ2VWP7 1150 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 ZNF425Q6IV72 752 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 KIRREL2Q6UWL6 708 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 IGFL2Q6UWQ7 119 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 KCNMB4Q86W47 210 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 PAQR7Q86WK9 346 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 SPNS2Q8IVW8 549 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 DENND6AQ8IWF6 608 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 LRRC56Q8IYG6 542 aaPredicted RBP9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 RAB42Q8N4Z0 105 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 DTWD1Q8N5C7 304 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 OTUD6BQ8N6M0 293 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 TTC29Q8NA56 475 aaPredicted RBP9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 CLEC1AQ8NC01 280 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 ACTRT1Q8TDG2 376 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 COG1Q8WTW3 980 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 ASB11Q8WXH4 323 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 KCNJ9Q92806 393 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 INPP5DQ92835 1189 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 FAM136AQ96C01 138 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 PKP4Q99569 1192 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 PLCD4Q9BRC7 762 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 ZBTB20Q9HC78 741 aaPredicted RBP9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 XAB2Q9HCS7 855 aaKnown RBP9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 SLC6A20Q9NP91 592 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 ATP13A2Q9NQ11 1180 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 IRAK4Q9NWZ3 460 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 VPS9D1Q9Y2B5 631 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 DHRS7Q9Y394 339 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 PCDHGA10Q9Y5H3 936 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 HS3ST3B1Q9Y662 390 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 CNTRLQ7Z7A1 2325 aa9.6□□□□□ -0.87
CLSTN3-203ENST00000534830 A0A0J9YVX5 310 aa9.59□□□□□ -0.87
CLSTN3-203ENST00000534830 A0A1B0GUH1 482 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms