RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 CRLS1Q9UJA2 301 aa16.14■□□□□ 0.17
CTSB-228ENST00000533455 GLYATL1P3A0A0U1RQE8 302 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 H7C4K7 107 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 SEPT4O43236 478 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 PCDHGA12O60330 932 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 PRMT3O60678 531 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 MYO1DO94832 1006 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 DIRAS1O95057 198 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 TRBC1P01850 177 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 C9P02748 559 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 GSTT2P0CG29 244 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 GSTT2BP0CG30 244 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 ENGP17813 658 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 MZF1P28698 734 aaPredicted RBP16.13■□□□□ 0.17
CTSB-228ENST00000533455 CREMQ03060 361 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 MAPK11Q15759 364 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 TBCEQ15813 527 aaPredicted RBP16.13■□□□□ 0.17
CTSB-228ENST00000533455 IQCCQ4KMZ1 466 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 RTP2Q5QGT7 225 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 MLIPQ5VWP3 458 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 CCSAPQ6IQ19 270 aaPredicted RBP16.13■□□□□ 0.17
CTSB-228ENST00000533455 VTCN1Q7Z7D3 282 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 RASAL3Q86YV0 1011 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 ENTHD1Q8IYW4 607 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 L3MBTL4Q8NA19 623 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 ATG16L2Q8NAA4 619 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 PSMA8Q8TAA3 256 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 APIPQ96GX9 242 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 TXNDC15Q96J42 360 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 HRASLS5Q96KN8 279 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 EPYCQ99645 322 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 MYOCQ99972 504 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 NXF2Q9GZY0 626 aaKnown RBP16.13■□□□□ 0.17
CTSB-228ENST00000533455 POLE4Q9NR33 117 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 PLCXD1Q9NUJ7 323 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 THUMPD1Q9NXG2 353 aaKnown RBP16.13■□□□□ 0.17
CTSB-228ENST00000533455 ZNF229Q9UJW7 825 aa16.13■□□□□ 0.17
CTSB-228ENST00000533455 PABPN1LA6NDY0 278 aaKnown RBP16.12■□□□□ 0.17
CTSB-228ENST00000533455 EIF3FO00303 357 aaPredicted RBP16.12■□□□□ 0.17
CTSB-228ENST00000533455 FPGTO14772 594 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 EPN2O95208 641 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 BPIP17213 487 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 AMD1P17707 334 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 TGFBR1P36897 503 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 CHRNA6Q15825 494 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 KCNJ8Q15842 424 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 MFSD14CQ5VZR4 134 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 FUT10Q6P4F1 479 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 TRAF7Q6Q0C0 670 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 NXPE1Q8N323 547 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 CBARPQ8N350 705 aaPredicted RBP16.12■□□□□ 0.17
CTSB-228ENST00000533455 CSGALNACT1Q8TDX6 532 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 DNASE1L2Q92874 299 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 CORO1BQ9BR76 489 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 REXO4Q9GZR2 422 aaKnown RBP16.12■□□□□ 0.17
CTSB-228ENST00000533455 RASSF1Q9NS23 344 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 GKN1Q9NS71 199 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 OR51B4Q9Y5P0 310 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 AP1M2Q9Y6Q5 423 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 ZBBXA8MT70 800 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 SCN2BO60939 215 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 LRATO95237 230 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 PRPS1L1P21108 318 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 SPAM1P38567 509 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 LIPAP38571 399 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 SLC6A12P48065 614 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 PXNP49023 591 aaPredicted RBP16.12■□□□□ 0.17
CTSB-228ENST00000533455 RPIAP49247 311 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 WNT3P56703 355 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 SRSF11Q05519 484 aaKnown RBP16.12■□□□□ 0.17
CTSB-228ENST00000533455 FPGSQ05932 587 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 ELP6Q0PNE2 266 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 CAMK2GQ13555 558 aaPredicted RBP16.12■□□□□ 0.17
CTSB-228ENST00000533455 VEZF1Q14119 521 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 MBTPS1Q14703 1052 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 NEK5Q6P3R8 708 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 WBP2Q969T9 261 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 EGLN2Q96KS0 407 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 SPATA9Q9BWV2 254 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 ARL15Q9NXU5 204 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 VPS51Q9UID3 782 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 PNMA8BQ9ULN7 279 aaPredicted RBP16.12■□□□□ 0.17
CTSB-228ENST00000533455 PCDHGA6Q9Y5G7 932 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 DNAH12Q6ZR08 3092 aa16.12■□□□□ 0.17
CTSB-228ENST00000533455 AGAP5A6NIR3 686 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 AGAP14A8MT82 685 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 M0R082 166 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 AIREO43918 545 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 CELF2O95319 508 aaKnown RBP16.11■□□□□ 0.17
CTSB-228ENST00000533455 C1QCP02747 245 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 COL6A1P12109 1028 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 CKBP12277 381 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 CTGFP29279 349 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 CLK1P49759 484 aaKnown RBP16.11■□□□□ 0.17
CTSB-228ENST00000533455 NEK2P51955 445 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 UGT8Q16880 541 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 DEPDC1Q5TB30 811 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 NOXRED1Q6NXP6 359 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 USP43Q70EL4 1123 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 ADGRG2Q8IZP9 1017 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms