RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 PHF2O75151 1096 aa11.82□□□□□ -0.52
CAPN1-223ENST00000533079 ZNF189O75820 626 aaPredicted RBP11.82□□□□□ -0.52
CAPN1-223ENST00000533079 CYC1P08574 325 aa11.82□□□□□ -0.52
CAPN1-223ENST00000533079 ERVK-10P10266 1014 aa11.82□□□□□ -0.52
CAPN1-223ENST00000533079 CD99P14209 185 aa11.82□□□□□ -0.52
CAPN1-223ENST00000533079 CDKN1CP49918 316 aaPredicted RBP11.82□□□□□ -0.52
CAPN1-223ENST00000533079 EMP2P54851 167 aa11.82□□□□□ -0.52
CAPN1-223ENST00000533079 VSX2P58304 361 aaPredicted RBP11.82□□□□□ -0.52
CAPN1-223ENST00000533079 EEF1A2Q05639 463 aaKnown RBP11.82□□□□□ -0.52
CAPN1-223ENST00000533079 ZNF33BQ06732 778 aa11.82□□□□□ -0.52
CAPN1-223ENST00000533079 CDSNQ15517 529 aa11.82□□□□□ -0.52
CAPN1-223ENST00000533079 SF1Q15637 639 aaKnown RBP11.82□□□□□ -0.52
CAPN1-223ENST00000533079 WASHC2DQ5SRD0 308 aa11.82□□□□□ -0.52
CAPN1-223ENST00000533079 KAZNQ674X7 775 aa11.82□□□□□ -0.52
CAPN1-223ENST00000533079 UNC5DQ6UXZ4 953 aa11.82□□□□□ -0.52
CAPN1-223ENST00000533079 NEK10Q6ZWH5 1172 aa11.82□□□□□ -0.52
CAPN1-223ENST00000533079 RNF44Q7L0R7 432 aa11.82□□□□□ -0.52
CAPN1-223ENST00000533079 HES6Q96HZ4 224 aa11.82□□□□□ -0.52
CAPN1-223ENST00000533079 TBL1YQ9BQ87 522 aa11.82□□□□□ -0.52
CAPN1-223ENST00000533079 VKORC1Q9BQB6 163 aa11.82□□□□□ -0.52
CAPN1-223ENST00000533079 APOL2Q9BQE5 337 aa11.82□□□□□ -0.52
CAPN1-223ENST00000533079 TUBB6Q9BUF5 446 aa11.82□□□□□ -0.52
CAPN1-223ENST00000533079 TMUB1Q9BVT8 246 aa11.82□□□□□ -0.52
CAPN1-223ENST00000533079 TSSK1BQ9BXA7 367 aa11.82□□□□□ -0.52
CAPN1-223ENST00000533079 TGIF2Q9GZN2 237 aa11.82□□□□□ -0.52
CAPN1-223ENST00000533079 MKKSQ9NPJ1 570 aaPredicted RBP11.82□□□□□ -0.52
CAPN1-223ENST00000533079 COQ3Q9NZJ6 369 aa11.82□□□□□ -0.52
CAPN1-223ENST00000533079 AMFRQ9UKV5 643 aa11.82□□□□□ -0.52
CAPN1-223ENST00000533079 TTC7AQ9ULT0 858 aaPredicted RBP11.82□□□□□ -0.52
CAPN1-223ENST00000533079 NEU2Q9Y3R4 380 aa11.82□□□□□ -0.52
CAPN1-223ENST00000533079 PKDREJQ9NTG1 2253 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 hCG_1818297A0A087WSY0 165 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 ASPDHA6ND91 283 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 APOC4-APOC2K7ER74 178 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 CCL22O00626 93 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 TTI1O43156 1089 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 SPOPO43791 374 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 STK10O94804 968 aaKnown RBP11.81□□□□□ -0.52
CAPN1-223ENST00000533079 NADKO95544 446 aaPredicted RBP11.81□□□□□ -0.52
CAPN1-223ENST00000533079 TSPAN12O95859 305 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 F10P00742 488 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 APOC2P02655 101 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 ITGAMP11215 1152 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 PSMB4P28070 264 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 PAFAH1B1P43034 410 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 PMP22Q01453 160 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 ALDH6A1Q02252 535 aaKnown RBP11.81□□□□□ -0.52
CAPN1-223ENST00000533079 BRD3Q15059 726 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 PCOLCEQ15113 449 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 ERCC6LQ2NKX8 1250 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 DENND5AQ6IQ26 1287 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 PEX26Q7Z412 305 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 PIANPQ8IYJ0 282 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 PRSS58Q8IYP2 241 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 GHDCQ8N2G8 530 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 MMGT1Q8N4V1 131 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 RAB42Q8N4Z0 105 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 LMNTD1Q8N9Z9 388 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 FAM98AQ8NCA5 519 aaKnown RBP11.81□□□□□ -0.52
CAPN1-223ENST00000533079 CHDHQ8NE62 594 aaPredicted RBP11.81□□□□□ -0.52
CAPN1-223ENST00000533079 STYXQ8WUJ0 223 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 SLC24A3Q9HC58 644 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 TNFRSF10DQ9UBN6 386 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 SLC39A10Q9ULF5 831 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 MKL2Q9ULH7 1088 aa11.81□□□□□ -0.52
CAPN1-223ENST00000533079 SVILO95425 2214 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 NIPBLQ6KC79 2804 aaeCLIP11.8□□□□□ -0.52
CAPN1-223ENST00000533079 FBN3Q75N90 2809 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 CDK2AP1O14519 115 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 CTSVO60911 334 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 HEXBP07686 556 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 ABOP16442 354 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 IGFBP2P18065 325 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 RBL1P28749 1068 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 EEF1DP29692 281 aaKnown RBP11.8□□□□□ -0.52
CAPN1-223ENST00000533079 GRIA3P42263 894 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 OLIG2Q13516 323 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 FRMPD2BQ6IN97 320 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 TTC23LQ6PF05 361 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 TMEM205Q6UW68 189 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 ARHGEF18Q6ZSZ5 1173 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 MTERF4Q7Z6M4 381 aaKnown RBP11.8□□□□□ -0.52
CAPN1-223ENST00000533079 LAPTM4BQ86VI4 370 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 CDKL3Q8IVW4 592 aaPredicted RBP11.8□□□□□ -0.52
CAPN1-223ENST00000533079 KLHDC8BQ8IXV7 354 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 KATNAL2Q8IYT4 538 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 RASGEF1CQ8N431 466 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 TMEM178AQ8NBL3 297 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 HMGCLL1Q8TB92 370 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 ACTRT1Q8TDG2 376 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 AGAP11Q8TF27 550 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 ASZ1Q8WWH4 475 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 NINJ1Q92982 152 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 HAUS1Q96CS2 278 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 CDKN2AIPNLQ96HQ2 116 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 ZNF354BQ96LW1 612 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 C10orf90Q96M02 699 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 FRMD6Q96NE9 622 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 TTC1Q99614 292 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 ZFYVE21Q9BQ24 234 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms