RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 CYP4F2P78329 520 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 CDC20Q12834 499 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 TSNQ15631 228 aaKnown RBP12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 PHKG1Q16816 387 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 KRT71Q3SY84 523 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 BORAQ6PGQ7 559 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 CDHR3Q6ZTQ4 885 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 TDRPQ86YL5 185 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 GPSM1Q86YR5 675 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 TMEM126BQ8IUX1 230 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 ZNF843Q8N446 348 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 EXD3Q8N9H8 876 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 C19orf47Q8N9M1 422 aaKnown RBP12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 LMNTD1Q8N9Z9 388 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 LINC01555Q8NAE3 123 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 OR1L3Q8NH93 324 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 ANKRD7Q92527 254 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 EXTL1Q92935 676 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 ALKBH8Q96BT7 664 aaKnown RBP12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 ZBTB9Q96C00 473 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 CABS1Q96KC9 395 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 CCDC138Q96M89 665 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 RUFY1Q96T51 708 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 DPH2Q9BQC3 489 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 ROPN1BQ9BZX4 212 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 ADNPQ9H2P0 1102 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 CENPHQ9H3R5 247 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 ALG9Q9H6U8 611 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 ROPN1Q9HAT0 212 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 ENAMQ9NRM1 1142 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 TUBD1Q9UJT1 453 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 IKZF3Q9UKT9 509 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 RNF112Q9ULX5 631 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 KALRNO60229 2985 aa12.45□□□□□ -0.42
TRAPPC4-212ENST00000533058 NCF1BA6NI72 391 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 NCF1CA8MVU1 366 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 SUPT3HB4E1H0 165 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 TMEM150CB9EJG8 249 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 H3BMH7 237 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 NKX2-8O15522 239 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 PRICKLE3O43900 615 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 SUPT3HO75486 399 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 SLC16A8O95907 504 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 NTRK1P04629 796 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 KLK3P07288 261 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 ENO2P09104 434 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 HBQ1P09105 142 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 NCF1P14598 390 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 PVRP15151 417 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 TCN2P20062 427 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 PEBP1P30086 187 aaKnown RBP12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 RPA3P35244 121 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 RORAP35398 523 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 SLC26A3P40879 764 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 PNLIPRP1P54315 467 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 ITGA1P56199 1179 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 DLG1Q12959 904 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 DNASE1L3Q13609 305 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 LY6DQ14210 128 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 ZIC1Q15915 447 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 BEND6Q5SZJ8 279 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 CEP85LQ5SZL2 805 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 THEMIS2Q5TEJ8 643 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 MBOAT1Q6ZNC8 495 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 TIFABQ6ZNK6 161 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 RIBC1Q8N443 379 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 DNAJC22Q8N4W6 341 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 SLC38A9Q8NBW4 561 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 FBXO15Q8NCQ5 510 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 STAG3L4Q8TBR4 150 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 CT55Q8WUE5 264 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 DLG3Q92796 817 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 ARHGAP9Q9BRR9 750 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 SEMA4CQ9C0C4 833 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 IGSF5Q9NSI5 407 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 GEMIN8Q9NWZ8 242 aaKnown RBP12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 CD274Q9NZQ7 290 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 NOVA2Q9UNW9 492 aaKnown RBP12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 OARD1Q9Y530 152 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 KLK4Q9Y5K2 254 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 AP1M2Q9Y6Q5 423 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 COL6A6A6NMZ7 2263 aa12.44□□□□□ -0.42
TRAPPC4-212ENST00000533058 FASNP49327 2511 aaKnown RBP12.43□□□□□ -0.42
TRAPPC4-212ENST00000533058 FOXO6A8MYZ6 492 aa12.43□□□□□ -0.42
TRAPPC4-212ENST00000533058 TARM1B6A8C7 271 aa12.43□□□□□ -0.42
TRAPPC4-212ENST00000533058 E7EQ34 232 aa12.43□□□□□ -0.42
TRAPPC4-212ENST00000533058 MEN1O00255 615 aa12.43□□□□□ -0.42
TRAPPC4-212ENST00000533058 CREG1O75629 220 aa12.43□□□□□ -0.42
TRAPPC4-212ENST00000533058 RFPL1O75677 317 aa12.43□□□□□ -0.42
TRAPPC4-212ENST00000533058 KLHL2O95198 593 aa12.43□□□□□ -0.42
TRAPPC4-212ENST00000533058 WISP3O95389 354 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC4-212ENST00000533058 PRB1P04280 392 aa12.43□□□□□ -0.42
TRAPPC4-212ENST00000533058 ANXA5P08758 320 aa12.43□□□□□ -0.42
TRAPPC4-212ENST00000533058 RAB40ALP0C0E4 278 aa12.43□□□□□ -0.42
TRAPPC4-212ENST00000533058 PYGBP11216 843 aa12.43□□□□□ -0.42
TRAPPC4-212ENST00000533058 OAS2P29728 719 aaKnown RBP12.43□□□□□ -0.42
TRAPPC4-212ENST00000533058 MAGEA12P43365 314 aa12.43□□□□□ -0.42
TRAPPC4-212ENST00000533058 AP1S2P56377 157 aa12.43□□□□□ -0.42
TRAPPC4-212ENST00000533058 GPS2Q13227 327 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms