RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 SUSD2Q9UGT4 822 aa14.41□□□□□ -0.1
PCDHA9-202ENST00000532602 ZNF222Q9UK12 451 aa14.41□□□□□ -0.1
PCDHA9-202ENST00000532602 COMMD3-BMI1R4GMX3 469 aa14.41□□□□□ -0.1
PCDHA9-202ENST00000532602 LDB2O43679 373 aa14.41□□□□□ -0.1
PCDHA9-202ENST00000532602 GDF5P43026 501 aa14.41□□□□□ -0.1
PCDHA9-202ENST00000532602 AP3S2P59780 193 aa14.41□□□□□ -0.1
PCDHA9-202ENST00000532602 LMAN2Q12907 356 aa14.41□□□□□ -0.1
PCDHA9-202ENST00000532602 OR5AK3PQ8NH89 298 aa14.41□□□□□ -0.1
PCDHA9-202ENST00000532602 C11orf24Q96F05 449 aaPredicted RBP14.41□□□□□ -0.1
PCDHA9-202ENST00000532602 ZSWIM3Q96MP5 696 aa14.41□□□□□ -0.1
PCDHA9-202ENST00000532602 TUBGCP5Q96RT8 1024 aa14.41□□□□□ -0.1
PCDHA9-202ENST00000532602 CHMP1AQ9HD42 196 aaPredicted RBP14.41□□□□□ -0.1
PCDHA9-202ENST00000532602 CPSF4LA6NMK7 179 aaKnown RBP14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 TPD52L2O43399 206 aaKnown RBP14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 VEGFDO43915 354 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 PLOD3O60568 738 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 LEFTY1O75610 366 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 TLR1Q15399 786 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 MSS51Q4VC12 460 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 CXorf57Q6NSI4 855 aaKnown RBP14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 DNM1P34Q6PK57 102 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 KLHL6Q8WZ60 621 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 DDX1Q92499 740 aaKnown RBP14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 NCSTNQ92542 709 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 STRADBQ9C0K7 418 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 SFXN1Q9H9B4 322 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 PLCH1Q4KWH8 1693 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 FAM25EA8MYX2 175 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 HMGN1P05114 100 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 METTL27Q8N6F8 245 aaPredicted RBP14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 BANPQ8N9N5 519 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 OR4K17Q8NGC6 315 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 IGSF8Q969P0 613 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 CDC7O00311 574 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 ZNF208O43345 1280 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 KLK1P06870 262 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 PREPP48147 710 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 CLCN4P51793 760 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 DMPKQ09013 629 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 KCNJ11Q14654 390 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 SUSD1Q6UWL2 747 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 DCUN1D3Q8IWE4 304 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 OMA1Q96E52 524 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 RETREG1Q9H6L5 497 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 STYXL1Q9Y6J8 313 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 LOC110117498-PIK3R3F6TDL0 507 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 GBAP04062 536 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 ANXA8P13928 327 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 ENPP2Q13822 863 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 KLHL22Q53GT1 634 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 CDH24Q86UP0 819 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 GTPBP3Q969Y2 492 aaKnown RBP14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 RAB7BQ96AH8 199 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 NPY6RQ99463 290 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 P2RY13Q9BPV8 354 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 B3GAT2Q9NPZ5 323 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 SPHK2Q9NRA0 654 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 EDNRBP24530 442 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 VBP1P61758 197 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 SP140Q13342 867 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 TOR1AIP1Q5JTV8 583 aa14.4□□□□□ -0.1
PCDHA9-202ENST00000532602 TMEM233B4DJY2 109 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 AP2A2O94973 939 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 STARP49675 285 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 PAFAH1B3Q15102 231 aaKnown RBP14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 C12orf40Q86WS4 652 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 ZNF570Q96NI8 536 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 CLEC4AQ9UMR7 237 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 TMED5Q9Y3A6 229 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 HEPACAM2A8MVW5 462 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 TTC34A8MYJ7 566 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 MAN2B1O00754 1011 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 TGM5O43548 720 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 AHSGP02765 367 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 KCTD21Q4G0X4 260 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 PQLC3Q8N755 202 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 OR5M3Q8NGP4 307 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 LRIG1Q96JA1 1093 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 XYLT2Q9H1B5 865 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 ADAM7Q9H2U9 754 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 TPK1Q9H3S4 243 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 ELAC1Q9H777 363 aaKnown RBP14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 A0A1W2PP55 124 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 CLUP10909 449 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 ELOCQ15369 112 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 UBAP2Q5T6F2 1119 aaKnown RBP14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 ZNF783Q6ZMS7 281 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 NECTIN4Q96NY8 510 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 EBF4Q9BQW3 602 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 ARHGAP9Q9BRR9 750 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 RNF121Q9H920 327 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 CYTH4Q9UIA0 394 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 MYH3P11055 1940 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 SCDO00767 359 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 PRAMEF11O60813 436 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 SHOX2O60902 331 aaPredicted RBP14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 CYP11A1P05108 521 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 JMJD7P0C870 316 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 GSTT1P30711 240 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 VIPR2P41587 438 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms