RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 SPNS1Q9H2V7 528 aa21.18■□□□□ 0.98
PACSIN3-209ENST00000532457 CPNE7Q9UBL6 633 aa21.18■□□□□ 0.98
PACSIN3-209ENST00000532457 TAC3Q9UHF0 121 aa21.18■□□□□ 0.98
PACSIN3-209ENST00000532457 ZNF490Q9ULM2 529 aaPredicted RBP21.18■□□□□ 0.98
PACSIN3-209ENST00000532457 ZFHX2Q9C0A1 2572 aaPredicted RBP21.17■□□□□ 0.98
PACSIN3-209ENST00000532457 YKT6O15498 198 aa21.17■□□□□ 0.98
PACSIN3-209ENST00000532457 SDC3O75056 442 aa21.17■□□□□ 0.98
PACSIN3-209ENST00000532457 PEX11AO75192 247 aa21.17■□□□□ 0.98
PACSIN3-209ENST00000532457 ULK1O75385 1050 aa21.17■□□□□ 0.98
PACSIN3-209ENST00000532457 ALDOCP09972 364 aaKnown RBP21.17■□□□□ 0.98
PACSIN3-209ENST00000532457 PRR35P0CG20 571 aa21.17■□□□□ 0.98
PACSIN3-209ENST00000532457 HNRNPKP61978 463 aaKnown RBP eCLIP21.17■□□□□ 0.98
PACSIN3-209ENST00000532457 TCEAL6Q6IPX3 200 aa21.17■□□□□ 0.98
PACSIN3-209ENST00000532457 NXPE4Q6UWF7 544 aa21.17■□□□□ 0.98
PACSIN3-209ENST00000532457 EFL1Q7Z2Z2 1120 aaKnown RBP21.17■□□□□ 0.98
PACSIN3-209ENST00000532457 FAM20CQ8IXL6 584 aa21.17■□□□□ 0.98
PACSIN3-209ENST00000532457 OR2A1Q8NGT9 310 aa21.17■□□□□ 0.98
PACSIN3-209ENST00000532457 ZDHHC1Q8WTX9 485 aa21.17■□□□□ 0.98
PACSIN3-209ENST00000532457 SLC5A11Q8WWX8 675 aa21.17■□□□□ 0.98
PACSIN3-209ENST00000532457 TCEAL3Q969E4 200 aa21.17■□□□□ 0.98
PACSIN3-209ENST00000532457 TUBGCP3Q96CW5 907 aa21.17■□□□□ 0.98
PACSIN3-209ENST00000532457 WDR34Q96EX3 536 aa21.17■□□□□ 0.98
PACSIN3-209ENST00000532457 GTPBP2Q9BX10 602 aaKnown RBP21.17■□□□□ 0.98
PACSIN3-209ENST00000532457 GAREM1Q9H706 876 aa21.17■□□□□ 0.98
PACSIN3-209ENST00000532457 DYRK1BQ9Y463 629 aa21.17■□□□□ 0.98
PACSIN3-209ENST00000532457 LNP1A1A4G5 178 aa21.16■□□□□ 0.98
PACSIN3-209ENST00000532457 UGDHO60701 494 aa21.16■□□□□ 0.98
PACSIN3-209ENST00000532457 C1GALT1C1LP0DN25 315 aa21.16■□□□□ 0.98
PACSIN3-209ENST00000532457 CDH1P12830 882 aa21.16■□□□□ 0.98
PACSIN3-209ENST00000532457 CCND1P24385 295 aa21.16■□□□□ 0.98
PACSIN3-209ENST00000532457 NDUFS1P28331 727 aa21.16■□□□□ 0.98
PACSIN3-209ENST00000532457 MEF2AQ02078 507 aaPredicted RBP21.16■□□□□ 0.98
PACSIN3-209ENST00000532457 BNIP1Q12981 228 aa21.16■□□□□ 0.98
PACSIN3-209ENST00000532457 GPR18Q14330 331 aa21.16■□□□□ 0.98
PACSIN3-209ENST00000532457 TBCCQ15814 346 aa21.16■□□□□ 0.98
PACSIN3-209ENST00000532457 ZNF423Q2M1K9 1284 aa21.16■□□□□ 0.98
PACSIN3-209ENST00000532457 CCDC121Q6ZUS5 278 aa21.16■□□□□ 0.98
PACSIN3-209ENST00000532457 TRIM46Q7Z4K8 759 aa21.16■□□□□ 0.98
PACSIN3-209ENST00000532457 TMPRSS11BQ86T26 416 aa21.16■□□□□ 0.98
PACSIN3-209ENST00000532457 LCN9Q8WX39 176 aa21.16■□□□□ 0.98
PACSIN3-209ENST00000532457 SH3KBP1Q96B97 665 aa21.16■□□□□ 0.98
PACSIN3-209ENST00000532457 FSCN3Q9NQT6 498 aa21.16■□□□□ 0.98
PACSIN3-209ENST00000532457 CUEDC1Q9NWM3 386 aaPredicted RBP21.16■□□□□ 0.98
PACSIN3-209ENST00000532457 GEMIN8Q9NWZ8 242 aaKnown RBP21.16■□□□□ 0.98
PACSIN3-209ENST00000532457 CBX6O95503 412 aa21.15■□□□□ 0.98
PACSIN3-209ENST00000532457 RXRGP48443 463 aa21.15■□□□□ 0.98
PACSIN3-209ENST00000532457 HMGCS1Q01581 520 aa21.15■□□□□ 0.98
PACSIN3-209ENST00000532457 ELOCQ15369 112 aa21.15■□□□□ 0.98
PACSIN3-209ENST00000532457 SF3A2Q15428 464 aaKnown RBP21.15■□□□□ 0.98
PACSIN3-209ENST00000532457 FAM91A1Q658Y4 838 aa21.15■□□□□ 0.98
PACSIN3-209ENST00000532457 ATG9BQ674R7 924 aa21.15■□□□□ 0.98
PACSIN3-209ENST00000532457 GRHL2Q6ISB3 625 aa21.15■□□□□ 0.98
PACSIN3-209ENST00000532457 ASCL5Q7RTU5 278 aa21.15■□□□□ 0.98
PACSIN3-209ENST00000532457 ZNF740Q8NDX6 193 aa21.15■□□□□ 0.98
PACSIN3-209ENST00000532457 ZNF548Q8NEK5 533 aaPredicted RBP21.15■□□□□ 0.98
PACSIN3-209ENST00000532457 WDR20Q8TBZ3 569 aa21.15■□□□□ 0.98
PACSIN3-209ENST00000532457 B4DGG1 531 aa21.15■□□□□ 0.98
PACSIN3-209ENST00000532457 ANKRD65E5RJM6 399 aa21.15■□□□□ 0.98
PACSIN3-209ENST00000532457 BTN3A3O00478 584 aa21.15■□□□□ 0.98
PACSIN3-209ENST00000532457 BNIP3Q12983 259 aa21.15■□□□□ 0.98
PACSIN3-209ENST00000532457 SHBQ15464 509 aa21.15■□□□□ 0.98
PACSIN3-209ENST00000532457 YTHDF3Q7Z739 585 aaKnown RBP21.15■□□□□ 0.98
PACSIN3-209ENST00000532457 AMIGO1Q86WK6 493 aa21.15■□□□□ 0.98
PACSIN3-209ENST00000532457 ADGRF3Q8IZF5 1079 aa21.15■□□□□ 0.98
PACSIN3-209ENST00000532457 CHCHD4Q8N4Q1 142 aa21.15■□□□□ 0.98
PACSIN3-209ENST00000532457 CPSF7Q8N684 471 aaKnown RBP21.15■□□□□ 0.98
PACSIN3-209ENST00000532457 HAUS8Q9BT25 410 aa21.15■□□□□ 0.98
PACSIN3-209ENST00000532457 SPASTQ9UBP0 616 aa21.15■□□□□ 0.98
PACSIN3-209ENST00000532457 COPG1Q9Y678 874 aaKnown RBP21.15■□□□□ 0.98
PACSIN3-209ENST00000532457 IGKV1-8A0A0C4DH67 115 aa21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 KIR2DS5A0A0G2JLQ3 304 aa21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 A0A0G2JNG1 304 aa21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 ZNF839A8K0R7 811 aa21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 KIR2DS3K7RE56 304 aa21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 LSM1O15116 133 aaKnown RBP21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 AQP9O43315 295 aa21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 PIAS2O75928 621 aa21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 VIPP01282 170 aa21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 KIR2DS5Q14953 304 aa21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 LACTB2Q53H82 288 aaPredicted RBP21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 C6orf136Q5SQH8 315 aa21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 FRG2Q64ET8 278 aa21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 PRR23CQ6ZRP0 262 aa21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 RNF165Q6ZSG1 346 aa21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 FAM129CQ86XR2 697 aa21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 MINDY1Q8N5J2 469 aa21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 SELENOMQ8WWX9 145 aa21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 PTCD3Q96EY7 689 aaKnown RBP21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 FRG2BQ96QU4 278 aa21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 CCT7Q99832 543 aa21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 ACPTQ9BZG2 426 aa21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 TWSG1Q9GZX9 223 aa21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 SNX6Q9UNH7 406 aa21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 TRIM33Q9UPN9 1127 aa21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 TP53BP1Q12888 1972 aaPredicted RBP21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 PCDH15Q96QU1 1955 aa21.14■□□□□ 0.97
PACSIN3-209ENST00000532457 A0A1B0GTQ1 180 aa21.13■□□□□ 0.97
PACSIN3-209ENST00000532457 OR5K4A6NMS3 321 aa21.13■□□□□ 0.97
PACSIN3-209ENST00000532457 H0YIV9 168 aa21.13■□□□□ 0.97
PACSIN3-209ENST00000532457 UBDO15205 165 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms