RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 SLC40A1Q9NP59 571 aa5.63□□□□□ -1.51
HMGB1P42-201ENST00000532126 TREX1Q9NSU2 369 aa5.63□□□□□ -1.51
HMGB1P42-201ENST00000532126 ABCF3Q9NUQ8 709 aa5.63□□□□□ -1.51
HMGB1P42-201ENST00000532126 POT1Q9NUX5 634 aa5.63□□□□□ -1.51
HMGB1P42-201ENST00000532126 IMP3Q9NV31 184 aaKnown RBP5.63□□□□□ -1.51
HMGB1P42-201ENST00000532126 SYBUQ9NX95 663 aa5.63□□□□□ -1.51
HMGB1P42-201ENST00000532126 ZNF624Q9P2J8 865 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P42-201ENST00000532126 PSMD13Q9UNM6 376 aa5.63□□□□□ -1.51
HMGB1P42-201ENST00000532126 WDR37Q9Y2I8 494 aa5.63□□□□□ -1.51
HMGB1P42-201ENST00000532126 ENTPD2Q9Y5L3 495 aa5.63□□□□□ -1.51
HMGB1P42-201ENST00000532126 PCNX2A6NKB5 2137 aa5.63□□□□□ -1.51
HMGB1P42-201ENST00000532126 LRP4O75096 1905 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 CCDC187A0A096LP49 1063 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 FAM237BA0A1B0GVD1 139 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 LILRA5A6NI73 299 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 H3BUI4 141 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 DNALI1O14645 258 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 PFDN6O15212 129 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 CD3EAPO15446 510 aaKnown RBP5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 TTI1O43156 1089 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 OR1I1O60431 355 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 NDUFS3O75489 264 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 URI1O94763 535 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 LPLP06858 475 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 OR56A5P0C7T3 313 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 MTHFD1P11586 935 aaKnown RBP5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 AMD1P17707 334 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 ENDOUP21128 410 aaKnown RBP5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 RBMS1P29558 406 aaKnown RBP5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 CCKBRP32239 447 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 CSF2RBP32927 897 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 TTPAP49638 278 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 CASP6P55212 293 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 LGALS4P56470 323 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 ZFP36L1Q07352 338 aaKnown RBP5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 EIF3IQ13347 325 aaKnown RBP5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 DHX34Q14147 1143 aaKnown RBP5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 GPR18Q14330 331 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 KRT33BQ14525 404 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 SEMA3AQ14563 771 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 RPE65Q16518 533 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 C3orf36Q3SXR2 165 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 SYTL3Q4VX76 610 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 C3orf38Q5JPI3 329 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 RNASEH2BQ5TBB1 312 aaKnown RBP5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 KIAA0930Q6ICG6 404 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 MRNIPQ6NTE8 343 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 TMEM71Q6P5X7 295 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 WDR74Q6RFH5 385 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 TMEM26Q6ZUK4 368 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 RAB11FIP2Q7L804 512 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 TMPRSS9Q7Z410 1059 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 SDCCAG8Q86SQ7 713 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 LDB1Q86U70 411 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 HOOK3Q86VS8 718 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 CPOQ8IVL8 374 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 LSMEM2Q8N112 164 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 MPP5Q8N3R9 675 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 OTUD6BQ8N6M0 293 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 ZNF655Q8N720 491 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 SPATA4Q8NEY3 305 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 OR4D9Q8NGE8 314 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 WDR36Q8NI36 951 aaKnown RBP5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 HM13Q8TCT9 377 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 NCSTNQ92542 709 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 TMEM159Q96B96 161 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 TRIM44Q96DX7 344 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 STAMBPL1Q96FJ0 436 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 SLC35A4Q96G79 324 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 LIN37Q96GY3 246 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 C16orf45Q96MC5 204 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 C12orf66Q96MD2 445 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 KRT12Q99456 494 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 CMKLR1Q99788 373 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 DPYSL5Q9BPU6 564 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 ADI1Q9BV57 179 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 TSSK1BQ9BXA7 367 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 TBC1D10AQ9BXI6 508 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 GHITMQ9H3K2 345 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 SEMA6CQ9H3T2 930 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 EPB41L1Q9H4G0 881 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 COG4Q9H9E3 785 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 SEPSECSQ9HD40 501 aaKnown RBP5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 AKAP7Q9P0M2 348 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 MARCH4Q9P2E8 410 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 DKK4Q9UBT3 224 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 SATB2Q9UPW6 733 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 LOXL2Q9Y4K0 774 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 MAD1L1Q9Y6D9 718 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 ATP23Q9Y6H3 246 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 PRSS21Q9Y6M0 314 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 COLEC10Q9Y6Z7 277 aa5.62□□□□□ -1.51
HMGB1P42-201ENST00000532126 PRAMEF33A0A0G2JMD5 474 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 IGHV5-10-1A0A0J9YXX1 117 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 A0A1W2PNU3 283 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 EFCAB8A8MWE9 144 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 GOLGA8KD6RF30 607 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 GOLGA8TH3BQL2 631 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 LIN7AO14910 233 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms