RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 H2AFXP16104 143 aaPredicted RBP21.4■■□□□ 1.02
LRRK1-208ENST00000532029 TAC1P20366 129 aa21.4■■□□□ 1.02
LRRK1-208ENST00000532029 ALDH18A1P54886 795 aaKnown RBP21.4■■□□□ 1.02
LRRK1-208ENST00000532029 SLC18A2Q05940 514 aa21.4■■□□□ 1.02
LRRK1-208ENST00000532029 SETDB1Q15047 1291 aa21.4■■□□□ 1.02
LRRK1-208ENST00000532029 C16orf46Q6P387 395 aa21.4■■□□□ 1.02
LRRK1-208ENST00000532029 LRRC70Q7Z2Q7 622 aa21.4■■□□□ 1.02
LRRK1-208ENST00000532029 BPHLQ86WA6 291 aaPredicted RBP21.4■■□□□ 1.02
LRRK1-208ENST00000532029 PAQR7Q86WK9 346 aa21.4■■□□□ 1.02
LRRK1-208ENST00000532029 DNAJC22Q8N4W6 341 aa21.4■■□□□ 1.02
LRRK1-208ENST00000532029 SNX31Q8N9S9 440 aa21.4■■□□□ 1.02
LRRK1-208ENST00000532029 OR8K5Q8NH50 307 aa21.4■■□□□ 1.02
LRRK1-208ENST00000532029 UBTD2Q8WUN7 234 aa21.4■■□□□ 1.02
LRRK1-208ENST00000532029 SLC5A11Q8WWX8 675 aa21.4■■□□□ 1.02
LRRK1-208ENST00000532029 ESAMQ96AP7 390 aa21.4■■□□□ 1.02
LRRK1-208ENST00000532029 OR4K3Q96R72 315 aa21.4■■□□□ 1.02
LRRK1-208ENST00000532029 PLCD4Q9BRC7 762 aa21.4■■□□□ 1.02
LRRK1-208ENST00000532029 ZPBPQ9BS86 351 aa21.4■■□□□ 1.02
LRRK1-208ENST00000532029 APMAPQ9HDC9 416 aa21.4■■□□□ 1.02
LRRK1-208ENST00000532029 THSD1Q9NS62 852 aa21.4■■□□□ 1.02
LRRK1-208ENST00000532029 TMEM184CQ9NVA4 438 aa21.4■■□□□ 1.02
LRRK1-208ENST00000532029 DNAJC11Q9NVH1 559 aa21.4■■□□□ 1.02
LRRK1-208ENST00000532029 GRID1Q9ULK0 1009 aa21.4■■□□□ 1.02
LRRK1-208ENST00000532029 PCDHGA3Q9Y5H0 932 aa21.4■■□□□ 1.02
LRRK1-208ENST00000532029 IGKV1-8A0A0C4DH67 115 aa21.39■■□□□ 1.01
LRRK1-208ENST00000532029 OR2A25A4D2G3 310 aa21.39■■□□□ 1.01
LRRK1-208ENST00000532029 TMEM150CB9EJG8 249 aa21.39■■□□□ 1.01
LRRK1-208ENST00000532029 H7BY64 318 aa21.39■■□□□ 1.01
LRRK1-208ENST00000532029 KLK8O60259 260 aa21.39■■□□□ 1.01
LRRK1-208ENST00000532029 MSL3P1P0C860 447 aa21.39■■□□□ 1.01
LRRK1-208ENST00000532029 CDH1P12830 882 aa21.39■■□□□ 1.01
LRRK1-208ENST00000532029 CRHR1P34998 444 aa21.39■■□□□ 1.01
LRRK1-208ENST00000532029 CYP4F3Q08477 520 aa21.39■■□□□ 1.01
LRRK1-208ENST00000532029 DEFB110Q30KQ9 67 aa21.39■■□□□ 1.01
LRRK1-208ENST00000532029 ZNF425Q6IV72 752 aa21.39■■□□□ 1.01
LRRK1-208ENST00000532029 PPP1R3BQ86XI6 285 aa21.39■■□□□ 1.01
LRRK1-208ENST00000532029 PTGR2Q8N8N7 351 aaPredicted RBP21.39■■□□□ 1.01
LRRK1-208ENST00000532029 GATA6Q92908 595 aa21.39■■□□□ 1.01
LRRK1-208ENST00000532029 PRAP1Q96NZ9 151 aa21.39■■□□□ 1.01
LRRK1-208ENST00000532029 SMC6Q96SB8 1091 aa21.39■■□□□ 1.01
LRRK1-208ENST00000532029 CAPS2Q9BXY5 557 aa21.39■■□□□ 1.01
LRRK1-208ENST00000532029 B3GNT4Q9C0J1 378 aa21.39■■□□□ 1.01
LRRK1-208ENST00000532029 IQCGQ9H095 443 aaKnown RBP21.39■■□□□ 1.01
LRRK1-208ENST00000532029 SENP1Q9P0U3 644 aa21.39■■□□□ 1.01
LRRK1-208ENST00000532029 OPTCQ9UBM4 332 aa21.39■■□□□ 1.01
LRRK1-208ENST00000532029 SERTAD3Q9UJW9 196 aa21.39■■□□□ 1.01
LRRK1-208ENST00000532029 SH2B3Q9UQQ2 575 aa21.39■■□□□ 1.01
LRRK1-208ENST00000532029 PCDHGA7Q9Y5G6 932 aa21.39■■□□□ 1.01
LRRK1-208ENST00000532029 TNPO3Q9Y5L0 923 aaKnown RBP21.39■■□□□ 1.01
LRRK1-208ENST00000532029 B3GALT1Q9Y5Z6 326 aa21.39■■□□□ 1.01
LRRK1-208ENST00000532029 ANKRD12Q6UB98 2062 aa21.38■■□□□ 1.01
LRRK1-208ENST00000532029 ADAMTS20P59510 1910 aa21.38■■□□□ 1.01
LRRK1-208ENST00000532029 GOLGA6L10A6NI86 522 aa21.38■■□□□ 1.01
LRRK1-208ENST00000532029 NVLO15381 856 aaKnown RBP21.38■■□□□ 1.01
LRRK1-208ENST00000532029 MYZAPP0CAP1 466 aa21.38■■□□□ 1.01
LRRK1-208ENST00000532029 FGF5P12034 268 aa21.38■■□□□ 1.01
LRRK1-208ENST00000532029 AGTR2P50052 363 aa21.38■■□□□ 1.01
LRRK1-208ENST00000532029 CCR8P51685 355 aa21.38■■□□□ 1.01
LRRK1-208ENST00000532029 CDC16Q13042 620 aa21.38■■□□□ 1.01
LRRK1-208ENST00000532029 PDK4Q16654 411 aa21.38■■□□□ 1.01
LRRK1-208ENST00000532029 MCATQ8IVS2 390 aaKnown RBP21.38■■□□□ 1.01
LRRK1-208ENST00000532029 NEIL2Q969S2 332 aa21.38■■□□□ 1.01
LRRK1-208ENST00000532029 ZBTB9Q96C00 473 aa21.38■■□□□ 1.01
LRRK1-208ENST00000532029 ZNF501Q96CX3 271 aaPredicted RBP21.38■■□□□ 1.01
LRRK1-208ENST00000532029 APOPT1Q96IL0 206 aa21.38■■□□□ 1.01
LRRK1-208ENST00000532029 ZNF578Q96N58 590 aaPredicted RBP21.38■■□□□ 1.01
LRRK1-208ENST00000532029 STMN4Q9H169 189 aaPredicted RBP21.38■■□□□ 1.01
LRRK1-208ENST00000532029 CCDC86Q9H6F5 360 aaKnown RBP21.38■■□□□ 1.01
LRRK1-208ENST00000532029 ASCL3Q9NQ33 180 aa21.38■■□□□ 1.01
LRRK1-208ENST00000532029 IRAK4Q9NWZ3 460 aa21.38■■□□□ 1.01
LRRK1-208ENST00000532029 ANGPTL3Q9Y5C1 460 aa21.38■■□□□ 1.01
LRRK1-208ENST00000532029 KNTC1P50748 2209 aa21.38■■□□□ 1.01
LRRK1-208ENST00000532029 KIF26BQ2KJY2 2108 aa21.38■■□□□ 1.01
LRRK1-208ENST00000532029 A0A0J9YVX5 310 aa21.37■■□□□ 1.01
LRRK1-208ENST00000532029 C9orf172C9J069 976 aa21.37■■□□□ 1.01
LRRK1-208ENST00000532029 K7EPI3 171 aa21.37■■□□□ 1.01
LRRK1-208ENST00000532029 GNAZP19086 355 aa21.37■■□□□ 1.01
LRRK1-208ENST00000532029 SLC5A2P31639 672 aa21.37■■□□□ 1.01
LRRK1-208ENST00000532029 GRK3P35626 688 aa21.37■■□□□ 1.01
LRRK1-208ENST00000532029 GABRA4P48169 554 aa21.37■■□□□ 1.01
LRRK1-208ENST00000532029 ITGA1P56199 1179 aa21.37■■□□□ 1.01
LRRK1-208ENST00000532029 ERVPABLB-1P60509 514 aa21.37■■□□□ 1.01
LRRK1-208ENST00000532029 CCDC153Q494R4 210 aa21.37■■□□□ 1.01
LRRK1-208ENST00000532029 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.37■■□□□ 1.01
LRRK1-208ENST00000532029 RNF44Q7L0R7 432 aa21.37■■□□□ 1.01
LRRK1-208ENST00000532029 TMPRSS11BQ86T26 416 aa21.37■■□□□ 1.01
LRRK1-208ENST00000532029 GPR135Q8IZ08 494 aa21.37■■□□□ 1.01
LRRK1-208ENST00000532029 CCDC63Q8NA47 563 aa21.37■■□□□ 1.01
LRRK1-208ENST00000532029 PMEPA1Q969W9 287 aa21.37■■□□□ 1.01
LRRK1-208ENST00000532029 PHF21BQ96EK2 531 aa21.37■■□□□ 1.01
LRRK1-208ENST00000532029 ZFYVE21Q9BQ24 234 aa21.37■■□□□ 1.01
LRRK1-208ENST00000532029 MKS1Q9NXB0 559 aa21.37■■□□□ 1.01
LRRK1-208ENST00000532029 GPRC5BQ9NZH0 403 aa21.37■■□□□ 1.01
LRRK1-208ENST00000532029 CDRT15L2A8MXV6 281 aa21.36■■□□□ 1.01
LRRK1-208ENST00000532029 STX16-NPEPL1H3BU86 382 aa21.36■■□□□ 1.01
LRRK1-208ENST00000532029 STX16O14662 325 aa21.36■■□□□ 1.01
LRRK1-208ENST00000532029 HAT1O14929 419 aa21.36■■□□□ 1.01
LRRK1-208ENST00000532029 CLGNO14967 610 aa21.36■■□□□ 1.01
LRRK1-208ENST00000532029 NRP2O60462 931 aa21.36■■□□□ 1.01
LRRK1-208ENST00000532029 CTSVO60911 334 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms