RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 ACTL9Q8TC94 416 aa9.9□□□□□ -0.82
COPB1-207ENST00000529866 METTL21AQ8WXB1 218 aa9.9□□□□□ -0.82
COPB1-207ENST00000529866 ZNF354BQ96LW1 612 aa9.9□□□□□ -0.82
COPB1-207ENST00000529866 C10orf90Q96M02 699 aa9.9□□□□□ -0.82
COPB1-207ENST00000529866 IL17FQ96PD4 163 aa9.9□□□□□ -0.82
COPB1-207ENST00000529866 TTC1Q99614 292 aa9.9□□□□□ -0.82
COPB1-207ENST00000529866 FOXC2Q99958 501 aa9.9□□□□□ -0.82
COPB1-207ENST00000529866 ZNF559Q9BR84 538 aa9.9□□□□□ -0.82
COPB1-207ENST00000529866 TSSK1BQ9BXA7 367 aa9.9□□□□□ -0.82
COPB1-207ENST00000529866 TRIM5Q9C035 493 aa9.9□□□□□ -0.82
COPB1-207ENST00000529866 LACRTQ9GZZ8 138 aa9.9□□□□□ -0.82
COPB1-207ENST00000529866 ZNF700Q9H0M5 742 aa9.9□□□□□ -0.82
COPB1-207ENST00000529866 TSPAN10Q9H1Z9 355 aaPredicted RBP9.9□□□□□ -0.82
COPB1-207ENST00000529866 SLC24A3Q9HC58 644 aa9.9□□□□□ -0.82
COPB1-207ENST00000529866 MKKSQ9NPJ1 570 aaPredicted RBP9.9□□□□□ -0.82
COPB1-207ENST00000529866 NLE1Q9NVX2 485 aaPredicted RBP9.9□□□□□ -0.82
COPB1-207ENST00000529866 TNFRSF10DQ9UBN6 386 aa9.9□□□□□ -0.82
COPB1-207ENST00000529866 MRFAP1Q9Y605 127 aa9.9□□□□□ -0.82
COPB1-207ENST00000529866 PRSS21Q9Y6M0 314 aa9.9□□□□□ -0.82
COPB1-207ENST00000529866 CCDC88CQ9P219 2028 aa9.9□□□□□ -0.82
COPB1-207ENST00000529866 NCOA6Q14686 2063 aaPredicted RBP9.89□□□□□ -0.83
COPB1-207ENST00000529866 JMJD1CQ15652 2540 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 GRID2IPA4D2P6 1211 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 TMEM200CA6NKL6 621 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 A8MUI8 341 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 APOC4-APOC2K7ER74 178 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 VPS26AO75436 327 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 SUN1O94901 812 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 MED26O95402 600 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 APOC2P02655 101 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 PRSS56P0CW18 603 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 C8orf89P0DMQ9 161 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 IGFBP2P18065 325 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 DNAJA1P31689 397 aaKnown RBP9.89□□□□□ -0.83
COPB1-207ENST00000529866 EMP3P54852 163 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 CSE1LP55060 971 aaKnown RBP9.89□□□□□ -0.83
COPB1-207ENST00000529866 HSPA14Q0VDF9 509 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 OR1C1Q15619 314 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 ACER2Q5QJU3 275 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 CCDC181Q5TID7 509 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 CES4AQ5XG92 561 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 FRMPD2BQ6IN97 320 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 DENND5AQ6IQ26 1287 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 NAPRTQ6XQN6 538 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 RNF44Q7L0R7 432 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 BEST3Q8N1M1 668 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 TAB3Q8N5C8 712 aaPredicted RBP9.89□□□□□ -0.83
COPB1-207ENST00000529866 DNAAF3Q8N9W5 541 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 LMNTD1Q8N9Z9 388 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 CFAP61Q8NHU2 1237 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 STYXQ8WUJ0 223 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 ASZ1Q8WWH4 475 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 ASB5Q8WWX0 329 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 NINJ1Q92982 152 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 DMRTA2Q96SC8 542 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 ZFYVE21Q9BQ24 234 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 UTP23Q9BRU9 249 aaKnown RBP9.89□□□□□ -0.83
COPB1-207ENST00000529866 MENTQ9BUN1 341 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 TGIF2Q9GZN2 237 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 RBSNQ9H1K0 784 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 KLHL1Q9NR64 748 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 IMPACTQ9P2X3 320 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 C19orf25Q9UFG5 118 aaPredicted RBP9.89□□□□□ -0.83
COPB1-207ENST00000529866 KCNN3Q9UGI6 736 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 MKL2Q9ULH7 1088 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 KLK4Q9Y5K2 254 aa9.89□□□□□ -0.83
COPB1-207ENST00000529866 MACROD2A1Z1Q3 448 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 ASNA1O43681 348 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 PHF2O75151 1096 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 WISP2O76076 250 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 ZWINTO95229 277 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 APOA4P06727 396 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 CYC1P08574 325 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 ZNF24P17028 368 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 KLK2P20151 261 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 MSNP26038 577 aaKnown RBP9.88□□□□□ -0.83
COPB1-207ENST00000529866 ZNF75DP51815 510 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 IST1P53990 364 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 TUBA3CQ13748 450 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 SPARCL1Q14515 664 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 TMED2Q15363 201 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 MEP1AQ16819 746 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 PRTGQ2VWP7 1150 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 BTBD16Q32M84 506 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 ANKRD20A2Q5SQ80 823 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 ANKRD20A1Q5TYW2 823 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 ANKRD20A3Q5VUR7 823 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 GARNL3Q5VVW2 1013 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 PLAG1Q6DJT9 500 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 TUBA3EQ6PEY2 450 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 TMEM205Q6UW68 189 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 DOLPP1Q86YN1 238 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 TMEM139Q8IV31 216 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 CDKL3Q8IVW4 592 aaPredicted RBP9.88□□□□□ -0.83
COPB1-207ENST00000529866 SIAH3Q8IW03 269 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 CCDC170Q8IYT3 715 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 CSNK1A1LQ8N752 337 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 LRRC57Q8N9N7 239 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 MDS2Q8NDY4 140 aa9.88□□□□□ -0.83
COPB1-207ENST00000529866 GSDMBQ8TAX9 411 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms