RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 DCAF10Q5QP82 559 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 CCNYL2Q5T2Q4 361 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 IL17RELQ6ZVW7 336 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 ANO5Q75V66 913 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 APCDD1Q8J025 514 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 LGI2Q8N0V4 545 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 NDUFAF2Q8N183 169 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 AMER3Q8N944 861 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 OR1J1Q8NGS3 322 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 PHLDA1Q8WV24 401 aaPredicted RBP4.18□□□□□ -1.74
C11orf88-204ENST00000529661 PIGBQ92521 554 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 P2RX5Q93086 422 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 SNRNP40Q96DI7 357 aaKnown RBP4.18□□□□□ -1.74
C11orf88-204ENST00000529661 SLC47A1Q96FL8 570 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 CCDC43Q96MW1 224 aaKnown RBP4.18□□□□□ -1.74
C11orf88-204ENST00000529661 LAT2Q9GZY6 243 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 SNX25Q9H3E2 840 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 TLE6Q9H808 572 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 SDR39U1Q9NRG7 319 aaPredicted RBP4.18□□□□□ -1.74
C11orf88-204ENST00000529661 FAM118AQ9NWS6 357 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 ADPRHL2Q9NX46 363 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 CNIH4Q9P003 139 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 ACAD8Q9UKU7 415 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 GAB2Q9UQC2 676 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 TRIM64A6NGJ6 449 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 TRIM64BA6NI03 449 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 PPIP5K2O43314 1243 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 SNX3O60493 162 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 RPS6KA5O75582 802 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 C9P02748 559 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 GP1BBP13224 206 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 ITIH1P19827 911 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 CA4P22748 312 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 TIMP3P35625 211 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 SNU13P55769 128 aaKnown RBP4.17□□□□□ -1.74
C11orf88-204ENST00000529661 MAZP56270 477 aaKnown RBP4.17□□□□□ -1.74
C11orf88-204ENST00000529661 ST8SIA6P61647 398 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 KLC1Q07866 573 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 TAF10Q12962 218 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 ZNF789Q5FWF6 425 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 CCDC158Q5M9N0 1113 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 FAM166AQ6J272 317 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 PHLDB2Q86SQ0 1253 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 MMD2Q8IY49 270 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 NAT8LQ8N9F0 302 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.17□□□□□ -1.74
C11orf88-204ENST00000529661 TEKT1Q969V4 418 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 ST6GAL2Q96JF0 529 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 ZNF354BQ96LW1 612 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 HNRNPABQ99729 332 aaKnown RBP4.17□□□□□ -1.74
C11orf88-204ENST00000529661 PRRG4Q9BZD6 226 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 ACTL8Q9H568 366 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 DNAJC17Q9NVM6 304 aaKnown RBP4.17□□□□□ -1.74
C11orf88-204ENST00000529661 SLCO1C1Q9NYB5 712 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 CACNG4Q9UBN1 327 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 PA2G4Q9UQ80 394 aaKnown RBP4.17□□□□□ -1.74
C11orf88-204ENST00000529661 PCDHGA1Q9Y5H4 931 aa4.17□□□□□ -1.74
C11orf88-204ENST00000529661 LOC101059948A0A1B0GTJ6 334 aa4.16□□□□□ -1.74
C11orf88-204ENST00000529661 ANKRD61A6NGH8 418 aa4.16□□□□□ -1.74
C11orf88-204ENST00000529661 ARPC2O15144 300 aa4.16□□□□□ -1.74
C11orf88-204ENST00000529661 ZG16O60844 167 aa4.16□□□□□ -1.74
C11orf88-204ENST00000529661 KINO60870 393 aaKnown RBP4.16□□□□□ -1.74
C11orf88-204ENST00000529661 SLC16A8O95907 504 aa4.16□□□□□ -1.74
C11orf88-204ENST00000529661 PAK4O96013 591 aaPredicted RBP4.16□□□□□ -1.74
C11orf88-204ENST00000529661 EFNA1P20827 205 aaPredicted RBP4.16□□□□□ -1.74
C11orf88-204ENST00000529661 CD27P26842 260 aa4.16□□□□□ -1.74
C11orf88-204ENST00000529661 CDKN1AP38936 164 aa4.16□□□□□ -1.74
C11orf88-204ENST00000529661 HNF4AP41235 474 aa4.16□□□□□ -1.74
C11orf88-204ENST00000529661 CASP3P42574 277 aa4.16□□□□□ -1.74
C11orf88-204ENST00000529661 FRKP42685 505 aaPredicted RBP4.16□□□□□ -1.74
C11orf88-204ENST00000529661 NKX2-1P43699 371 aaPredicted RBP4.16□□□□□ -1.74
C11orf88-204ENST00000529661 KHKP50053 298 aa4.16□□□□□ -1.74
C11orf88-204ENST00000529661 CRIP2P52943 208 aaPredicted RBP4.16□□□□□ -1.74
C11orf88-204ENST00000529661 CDH11P55287 796 aa4.16□□□□□ -1.74
C11orf88-204ENST00000529661 XKR3Q5GH77 459 aa4.16□□□□□ -1.74
C11orf88-204ENST00000529661 CEP85LQ5SZL2 805 aa4.16□□□□□ -1.74
C11orf88-204ENST00000529661 ADAM5Q6NVV9 412 aa4.16□□□□□ -1.74
C11orf88-204ENST00000529661 CASC4Q6P4E1 433 aa4.16□□□□□ -1.74
C11orf88-204ENST00000529661 BTNL8Q6UX41 500 aa4.16□□□□□ -1.74
C11orf88-204ENST00000529661 AMIGO1Q86WK6 493 aa4.16□□□□□ -1.74
C11orf88-204ENST00000529661 CHCHD4Q8N4Q1 142 aa4.16□□□□□ -1.74
C11orf88-204ENST00000529661 NCOA7Q8NI08 942 aa4.16□□□□□ -1.74
C11orf88-204ENST00000529661 CENPTQ96BT3 561 aa4.16□□□□□ -1.74
C11orf88-204ENST00000529661 PGM2Q96G03 612 aa4.16□□□□□ -1.74
C11orf88-204ENST00000529661 PDLIM5Q96HC4 596 aaKnown RBP4.16□□□□□ -1.74
C11orf88-204ENST00000529661 GDAP1L1Q96MZ0 367 aa4.16□□□□□ -1.74
C11orf88-204ENST00000529661 ZMYND12Q9H0C1 365 aa4.16□□□□□ -1.74
C11orf88-204ENST00000529661 KNSTRNQ9Y448 316 aa4.16□□□□□ -1.74
C11orf88-204ENST00000529661 ABCC9O60706 1549 aa4.16□□□□□ -1.74
C11orf88-204ENST00000529661 IGLV9-49A0A0B4J1Y8 123 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 C2orf81A6NN90 581 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 RTN2O75298 545 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 NME6O75414 186 aaPredicted RBP4.15□□□□□ -1.75
C11orf88-204ENST00000529661 AMBPP02760 352 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 FRMD6-AS1P0C7T7 363 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 EPORP19235 508 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 CCND3P30281 292 aaPredicted RBP4.15□□□□□ -1.75
C11orf88-204ENST00000529661 CACNG1Q06432 222 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 SULT2A1Q06520 285 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 ACTN3Q08043 901 aaPredicted RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms