RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 LINC01555Q8NAE3 123 aa6.8□□□□□ -1.32
ITGB1-218ENST00000528877 PHC3Q8NDX5 983 aa6.8□□□□□ -1.32
ITGB1-218ENST00000528877 OR2L8Q8NGY9 312 aa6.8□□□□□ -1.32
ITGB1-218ENST00000528877 C9orf43Q8TAL5 461 aaPredicted RBP6.8□□□□□ -1.32
ITGB1-218ENST00000528877 PROKR1Q8TCW9 393 aa6.8□□□□□ -1.32
ITGB1-218ENST00000528877 ADAMTS17Q8TE56 1095 aa6.8□□□□□ -1.32
ITGB1-218ENST00000528877 GRK7Q8WTQ7 553 aa6.8□□□□□ -1.32
ITGB1-218ENST00000528877 THAP4Q8WY91 577 aa6.8□□□□□ -1.32
ITGB1-218ENST00000528877 SLC22A18Q96BI1 424 aa6.8□□□□□ -1.32
ITGB1-218ENST00000528877 ELMO2Q96JJ3 720 aa6.8□□□□□ -1.32
ITGB1-218ENST00000528877 PDLIM2Q96JY6 352 aa6.8□□□□□ -1.32
ITGB1-218ENST00000528877 COX4I2Q96KJ9 171 aa6.8□□□□□ -1.32
ITGB1-218ENST00000528877 SERPINB12Q96P63 405 aa6.8□□□□□ -1.32
ITGB1-218ENST00000528877 OSBPL9Q96SU4 736 aa6.8□□□□□ -1.32
ITGB1-218ENST00000528877 NRTNQ99748 197 aa6.8□□□□□ -1.32
ITGB1-218ENST00000528877 NLNQ9BYT8 704 aa6.8□□□□□ -1.32
ITGB1-218ENST00000528877 XKR8Q9H6D3 395 aa6.8□□□□□ -1.32
ITGB1-218ENST00000528877 INTS10Q9NVR2 710 aaKnown RBP6.8□□□□□ -1.32
ITGB1-218ENST00000528877 SPHK1Q9NYA1 384 aa6.8□□□□□ -1.32
ITGB1-218ENST00000528877 KLHL42Q9P2K6 505 aa6.8□□□□□ -1.32
ITGB1-218ENST00000528877 VTI1BQ9UEU0 232 aa6.8□□□□□ -1.32
ITGB1-218ENST00000528877 ANAPC5Q9UJX4 755 aa6.8□□□□□ -1.32
ITGB1-218ENST00000528877 SNX12Q9UMY4 172 aa6.8□□□□□ -1.32
ITGB1-218ENST00000528877 SRPK3Q9UPE1 567 aa6.8□□□□□ -1.32
ITGB1-218ENST00000528877 POLHQ9Y253 713 aa6.8□□□□□ -1.32
ITGB1-218ENST00000528877 COL12A1Q99715 3063 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 HECTD1Q9ULT8 2610 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 GOLGA6L10A0A0M3HER8 536 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 ZCWPW2A0A1B0GU75 182 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 MAGEB16A2A368 324 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 IQCF5A8MTL0 148 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 E7EQ34 232 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 EIF3FO00303 357 aaPredicted RBP6.79□□□□□ -1.32
ITGB1-218ENST00000528877 PFDN6O15212 129 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 ZSCAN9O15535 394 aaPredicted RBP6.79□□□□□ -1.32
ITGB1-218ENST00000528877 PRICKLE3O43900 615 aaPredicted RBP6.79□□□□□ -1.32
ITGB1-218ENST00000528877 NDUFS3O75489 264 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 RFPL1O75677 317 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 VAPBO95292 243 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 C1orf105O95561 183 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 KRT14P02533 472 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 NTRK1P04629 796 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 CYP2A7P20853 494 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 CD9P21926 228 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 NFATC3Q12968 1075 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 IL10RAQ13651 578 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 NAA25Q14CX7 972 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 NCF4Q15080 339 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 ATP1A1-AS1Q5TC04 95 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 PAPD7Q5XG87 772 aaKnown RBP6.79□□□□□ -1.32
ITGB1-218ENST00000528877 PTRHD1Q6GMV3 140 aaKnown RBP6.79□□□□□ -1.32
ITGB1-218ENST00000528877 TCTN3Q6NUS6 607 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 FBXO38Q6PIJ6 1188 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 NEK10Q6ZWH5 1172 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 CENPUQ71F23 418 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 OTOAQ7RTW8 1153 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 SDCCAG8Q86SQ7 713 aaPredicted RBP6.79□□□□□ -1.32
ITGB1-218ENST00000528877 LDB1Q86U70 411 aaPredicted RBP6.79□□□□□ -1.32
ITGB1-218ENST00000528877 HOOK3Q86VS8 718 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 SLC35F6Q8N357 371 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 NAT8LQ8N9F0 302 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 FBXO15Q8NCQ5 510 aaPredicted RBP6.79□□□□□ -1.32
ITGB1-218ENST00000528877 COG1Q8WTW3 980 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 KCNJ9Q92806 393 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 MAGOHBQ96A72 148 aaKnown RBP6.79□□□□□ -1.32
ITGB1-218ENST00000528877 MS4A14Q96JA4 679 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 HRASLS5Q96KN8 279 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 ZNF285Q96NJ3 590 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 C17orf62Q9BQA9 187 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 DHRS4Q9BTZ2 278 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 ACTR5Q9H9F9 607 aaPredicted RBP6.79□□□□□ -1.32
ITGB1-218ENST00000528877 FAM60AQ9NP50 221 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 SPATA7Q9P0W8 599 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 SAMD15Q9P1V8 674 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 PCYOX1Q9UHG3 505 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 ADGRE2Q9UHX3 823 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 MAN2B2Q9Y2E5 1009 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 AP1M2Q9Y6Q5 423 aa6.79□□□□□ -1.32
ITGB1-218ENST00000528877 USP9XQ93008 2570 aaPredicted RBP6.78□□□□□ -1.32
ITGB1-218ENST00000528877 FITM1A5D6W6 292 aa6.78□□□□□ -1.32
ITGB1-218ENST00000528877 SDR42E2A6NKP2 422 aa6.78□□□□□ -1.32
ITGB1-218ENST00000528877 MYO1CO00159 1063 aa6.78□□□□□ -1.32
ITGB1-218ENST00000528877 SLC28A2O43868 658 aa6.78□□□□□ -1.32
ITGB1-218ENST00000528877 KIF5CO60282 957 aa6.78□□□□□ -1.32
ITGB1-218ENST00000528877 AVILO75366 819 aa6.78□□□□□ -1.32
ITGB1-218ENST00000528877 PSIP1O75475 530 aaKnown RBP6.78□□□□□ -1.32
ITGB1-218ENST00000528877 CEACAM4O75871 244 aa6.78□□□□□ -1.32
ITGB1-218ENST00000528877 OR2B3O76000 313 aa6.78□□□□□ -1.32
ITGB1-218ENST00000528877 USP1O94782 785 aa6.78□□□□□ -1.32
ITGB1-218ENST00000528877 ONECUT2O95948 504 aa6.78□□□□□ -1.32
ITGB1-218ENST00000528877 KLK3P07288 261 aaPredicted RBP6.78□□□□□ -1.32
ITGB1-218ENST00000528877 PVRP15151 417 aa6.78□□□□□ -1.32
ITGB1-218ENST00000528877 TCP1P17987 556 aaKnown RBP6.78□□□□□ -1.32
ITGB1-218ENST00000528877 MAGP20916 626 aa6.78□□□□□ -1.32
ITGB1-218ENST00000528877 CASRP41180 1078 aa6.78□□□□□ -1.32
ITGB1-218ENST00000528877 CLCN7P51798 805 aa6.78□□□□□ -1.32
ITGB1-218ENST00000528877 EIF3BP55884 814 aaKnown RBP6.78□□□□□ -1.32
ITGB1-218ENST00000528877 RPS15P62841 145 aaKnown RBP6.78□□□□□ -1.32
ITGB1-218ENST00000528877 PTK6Q13882 451 aa6.78□□□□□ -1.32
ITGB1-218ENST00000528877 DHX34Q14147 1143 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms