RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 OR4D9Q8NGE8 314 aa13.2□□□□□ -0.3
CD44-224ENST00000526669 WDR48Q8TAF3 677 aa13.2□□□□□ -0.3
CD44-224ENST00000526669 PPP4R1Q8TF05 950 aa13.2□□□□□ -0.3
CD44-224ENST00000526669 ZNF483Q8TF39 744 aaPredicted RBP13.2□□□□□ -0.3
CD44-224ENST00000526669 SLC5A11Q8WWX8 675 aa13.2□□□□□ -0.3
CD44-224ENST00000526669 NEIL2Q969S2 332 aa13.2□□□□□ -0.3
CD44-224ENST00000526669 PRR11Q96HE9 360 aaPredicted RBP13.2□□□□□ -0.3
CD44-224ENST00000526669 TRAPPC9Q96Q05 1148 aa13.2□□□□□ -0.3
CD44-224ENST00000526669 HAUS8Q9BT25 410 aa13.2□□□□□ -0.3
CD44-224ENST00000526669 DPH7Q9BTV6 452 aa13.2□□□□□ -0.3
CD44-224ENST00000526669 GATA5Q9BWX5 397 aaPredicted RBP13.2□□□□□ -0.3
CD44-224ENST00000526669 ERVK-6Q9BXR3 956 aa13.2□□□□□ -0.3
CD44-224ENST00000526669 PCBD2Q9H0N5 130 aa13.2□□□□□ -0.3
CD44-224ENST00000526669 SPNS1Q9H2V7 528 aa13.2□□□□□ -0.3
CD44-224ENST00000526669 MED4Q9NPJ6 270 aa13.2□□□□□ -0.3
CD44-224ENST00000526669 SEMA4BQ9NPR2 832 aaPredicted RBP13.2□□□□□ -0.3
CD44-224ENST00000526669 SOHLH2Q9NX45 425 aa13.2□□□□□ -0.3
CD44-224ENST00000526669 TNPO3Q9Y5L0 923 aaKnown RBP13.2□□□□□ -0.3
CD44-224ENST00000526669 IGKV1-8A0A0C4DH67 115 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 H7BY64 318 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 E2F3O00716 465 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 CLGNO14967 610 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 TRIM13O60858 407 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 CSO75390 466 aaKnown RBP13.19□□□□□ -0.3
CD44-224ENST00000526669 DKK1O94907 266 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 DHRS4L1P0CG22 281 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 FGF3P11487 239 aaPredicted RBP13.19□□□□□ -0.3
CD44-224ENST00000526669 NEFHP12036 1026 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 CHN1P15882 459 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 EPORP19235 508 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 IMPDH1P20839 514 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 BGNP21810 368 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 SDHBP21912 280 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 VARSP26640 1264 aaKnown RBP13.19□□□□□ -0.3
CD44-224ENST00000526669 ARL1P40616 181 aaPredicted RBP13.19□□□□□ -0.3
CD44-224ENST00000526669 GRIA3P42263 894 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 MLLT3P42568 568 aaPredicted RBP13.19□□□□□ -0.3
CD44-224ENST00000526669 NAGLUP54802 743 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 INHBCP55103 352 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 PRDX1Q06830 199 aaKnown RBP13.19□□□□□ -0.3
CD44-224ENST00000526669 KCNAB1Q14722 419 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 CDCP2Q5VXM1 449 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 C19orf47Q8N9M1 422 aaKnown RBP13.19□□□□□ -0.3
CD44-224ENST00000526669 TRPC4APQ8TEL6 797 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 CCDC126Q96EE4 140 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 L3HYPDHQ96EM0 354 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 RNF31Q96EP0 1072 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 PRAP1Q96NZ9 151 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 CD180Q99467 661 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 DPYSL5Q9BPU6 564 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 SHCBP1LQ9BZQ2 653 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 GSTO2Q9H4Y5 243 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 NOL11Q9H8H0 719 aaKnown RBP13.19□□□□□ -0.3
CD44-224ENST00000526669 ZBTB26Q9HCK0 441 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 C1GALT1Q9NS00 363 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 DLL3Q9NYJ7 618 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 KCNE2Q9Y6J6 123 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 SDK2Q58EX2 2172 aa13.19□□□□□ -0.3
CD44-224ENST00000526669 FEZF1A0PJY2 475 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 FAM149AA5PLN7 773 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 PPP6CO00743 305 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 OR7A17O14581 309 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 HAT1O14929 419 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 PRAMEF4O60810 478 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 KATNA1O75449 491 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 STATHP02808 62 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 EPB42P16452 691 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 ARL4DP49703 201 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 CCNG1P51959 295 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 DNAJB13P59910 316 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 CLCQ05315 142 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 CYP4F3Q08477 520 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 CHIT1Q13231 466 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 COL9A2Q14055 689 aaPredicted RBP13.18□□□□□ -0.3
CD44-224ENST00000526669 C16orf72Q14CZ0 275 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 CHI3L2Q15782 390 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 XKR6Q5GH73 641 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 CFAP157Q5JU67 520 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 PRAMEF9Q5VWM5 478 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 CES4AQ5XG92 561 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 NXPE4Q6UWF7 544 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 PRSS42Q7Z5A4 293 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 MYLK4Q86YV6 388 aaPredicted RBP13.18□□□□□ -0.3
CD44-224ENST00000526669 OR52B6Q8NGF0 335 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 PPP1R14CQ8TAE6 165 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 ATP6V1E2Q96A05 226 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 FCRL4Q96PJ5 515 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 CDK15Q96Q40 435 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 DEPDC7Q96QD5 511 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 IPPKQ9H8X2 491 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 FAM60AQ9NP50 221 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 CLCA2Q9UQC9 943 aa13.18□□□□□ -0.3
CD44-224ENST00000526669 A0A0J9YVX5 310 aa13.17□□□□□ -0.3
CD44-224ENST00000526669 A0A1B0GTL3 188 aa13.17□□□□□ -0.3
CD44-224ENST00000526669 HYAL3O43820 417 aaPredicted RBP13.17□□□□□ -0.3
CD44-224ENST00000526669 ZBTB11O95625 1053 aaPredicted RBP13.17□□□□□ -0.3
CD44-224ENST00000526669 EBLN1P0CF75 366 aa13.17□□□□□ -0.3
CD44-224ENST00000526669 GNAZP19086 355 aa13.17□□□□□ -0.3
CD44-224ENST00000526669 PIK3CGP48736 1102 aa13.17□□□□□ -0.3
CD44-224ENST00000526669 SH3BP2P78314 561 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms