RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 POMGNT1Q8WZA1 660 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 SHC3Q92529 594 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 FUBP1Q96AE4 644 aaKnown RBP6.72□□□□□ -1.33
NEDD8-203ENST00000524927 RAB7BQ96AH8 199 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 R3HDM4Q96D70 268 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 PDXPQ96GD0 296 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 PRICKLE1Q96MT3 831 aaPredicted RBP6.72□□□□□ -1.33
NEDD8-203ENST00000524927 FAM213AQ9BRX8 229 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 DPCDQ9BVM2 203 aaPredicted RBP6.72□□□□□ -1.33
NEDD8-203ENST00000524927 TP63Q9H3D4 680 aaPredicted RBP6.72□□□□□ -1.33
NEDD8-203ENST00000524927 MBNL1Q9NR56 388 aaKnown RBP6.72□□□□□ -1.33
NEDD8-203ENST00000524927 RASSF1Q9NS23 344 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 SPATS2LQ9NUQ6 558 aaKnown RBP6.72□□□□□ -1.33
NEDD8-203ENST00000524927 BEX4Q9NWD9 120 aaPredicted RBP6.72□□□□□ -1.33
NEDD8-203ENST00000524927 RBAKQ9NYW8 714 aaPredicted RBP6.72□□□□□ -1.33
NEDD8-203ENST00000524927 KCND2Q9NZV8 630 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 SEC14L3Q9UDX4 400 aa6.72□□□□□ -1.33
NEDD8-203ENST00000524927 HRNRQ86YZ3 2850 aaPredicted RBP6.71□□□□□ -1.33
NEDD8-203ENST00000524927 PRKDCP78527 4128 aaKnown RBP6.71□□□□□ -1.33
NEDD8-203ENST00000524927 GOLGA6L7A0A1B0GV03 622 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 FAM237BA0A1B0GVD1 139 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 ZAR1LA6NP61 321 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 TISP43B9A030 160 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 PEX1O43933 1283 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 ACSL4O60488 711 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 IGHEP01854 428 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 TNNC2P02585 160 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 FESP07332 822 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 CCDC130P13994 396 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 LIPAP38571 399 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 CLCN2P51788 898 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 YWHAGP61981 247 aaKnown RBP eCLIP6.71□□□□□ -1.34
NEDD8-203ENST00000524927 AP2B1P63010 937 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 GTF2BQ00403 316 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 PDE1BQ01064 536 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 PEX6Q13608 980 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 TUBA3CQ13748 450 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 INAQ16352 499 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 ALFQ53S48 1182 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 Q5PR19 223 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 C20orf194Q5TEA3 1177 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 CYB5D1Q6P9G0 228 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 FAM199XQ6PEV8 388 aaPredicted RBP6.71□□□□□ -1.34
NEDD8-203ENST00000524927 TUBA3EQ6PEY2 450 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 MAVSQ7Z434 540 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 CDC20BQ86Y33 519 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 CPSF7Q8N684 471 aaKnown RBP6.71□□□□□ -1.34
NEDD8-203ENST00000524927 MCUQ8NE86 351 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 OR1N1Q8NGS0 311 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 WDR60Q8WVS4 1066 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 JAKMIP2Q96AA8 810 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 SDCCAG3Q96C92 435 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 FER1L6-AS2Q96M78 137 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 IP6K3Q96PC2 410 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 FCRL4Q96PJ5 515 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 OR6C1Q96RD1 312 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 AIFM2Q9BRQ8 373 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 ZNF747Q9BV97 191 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 AKIRIN1Q9H9L7 192 aaPredicted RBP6.71□□□□□ -1.34
NEDD8-203ENST00000524927 LRTM1Q9HBL6 345 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 SAYSD1Q9NPB0 183 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 KCTD5Q9NXV2 234 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 COQ3Q9NZJ6 369 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 KIF17Q9P2E2 1029 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 LPAR3Q9UBY5 353 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 NKX1-2Q9UD57 310 aaPredicted RBP6.71□□□□□ -1.34
NEDD8-203ENST00000524927 STEAP1Q9UHE8 339 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 RIMKLBQ9ULI2 386 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 SNX7Q9UNH6 387 aa6.71□□□□□ -1.34
NEDD8-203ENST00000524927 PIKFYVEQ9Y2I7 2098 aa6.7□□□□□ -1.34
NEDD8-203ENST00000524927 RNF103O00237 685 aa6.7□□□□□ -1.34
NEDD8-203ENST00000524927 SOCS6O14544 535 aa6.7□□□□□ -1.34
NEDD8-203ENST00000524927 PMPCBO75439 489 aa6.7□□□□□ -1.34
NEDD8-203ENST00000524927 XBP1P17861 261 aa6.7□□□□□ -1.34
NEDD8-203ENST00000524927 UGT1A4P22310 534 aa6.7□□□□□ -1.34
NEDD8-203ENST00000524927 TFF3Q07654 80 aa6.7□□□□□ -1.34
NEDD8-203ENST00000524927 ABHD17BQ5VST6 288 aa6.7□□□□□ -1.34
NEDD8-203ENST00000524927 KCTD16Q68DU8 428 aa6.7□□□□□ -1.34
NEDD8-203ENST00000524927 ANKRD40Q6AI12 368 aa6.7□□□□□ -1.34
NEDD8-203ENST00000524927 HEPHL1Q6MZM0 1159 aa6.7□□□□□ -1.34
NEDD8-203ENST00000524927 PRSS57Q6UWY2 283 aa6.7□□□□□ -1.34
NEDD8-203ENST00000524927 SLC44A2Q8IWA5 706 aaPredicted RBP6.7□□□□□ -1.34
NEDD8-203ENST00000524927 UNC45BQ8IWX7 931 aa6.7□□□□□ -1.34
NEDD8-203ENST00000524927 KIAA0895Q8NCT3 520 aa6.7□□□□□ -1.34
NEDD8-203ENST00000524927 CCL4L1Q8NHW4 92 aa6.7□□□□□ -1.34
NEDD8-203ENST00000524927 SUN3Q8TAQ9 357 aa6.7□□□□□ -1.34
NEDD8-203ENST00000524927 OR1E3Q8WZA6 343 aa6.7□□□□□ -1.34
NEDD8-203ENST00000524927 ARHGEF26Q96DR7 871 aa6.7□□□□□ -1.34
NEDD8-203ENST00000524927 ZMYND19Q96E35 227 aaPredicted RBP6.7□□□□□ -1.34
NEDD8-203ENST00000524927 Q96MF0 132 aa6.7□□□□□ -1.34
NEDD8-203ENST00000524927 GPATCH1Q9BRR8 931 aaKnown RBP6.7□□□□□ -1.34
NEDD8-203ENST00000524927 APOOQ9BUR5 198 aa6.7□□□□□ -1.34
NEDD8-203ENST00000524927 PDE11AQ9HCR9 933 aa6.7□□□□□ -1.34
NEDD8-203ENST00000524927 KLC4Q9NSK0 619 aa6.7□□□□□ -1.34
NEDD8-203ENST00000524927 EHD3Q9NZN3 535 aa6.7□□□□□ -1.34
NEDD8-203ENST00000524927 IL36AQ9UHA7 158 aa6.7□□□□□ -1.34
NEDD8-203ENST00000524927 TINAGQ9UJW2 476 aa6.7□□□□□ -1.34
NEDD8-203ENST00000524927 HCFC1P51610 2035 aa6.7□□□□□ -1.34
NEDD8-203ENST00000524927 TOX3O15405 576 aaPredicted RBP6.69□□□□□ -1.34
NEDD8-203ENST00000524927 TM7SF2O76062 418 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms