RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 FAM136AQ96C01 138 aa24.65■■□□□ 1.54
PVT1-219ENST00000523427 MMABQ96EY8 250 aaPredicted RBP24.65■■□□□ 1.54
PVT1-219ENST00000523427 LURAP1Q96LR2 239 aa24.65■■□□□ 1.54
PVT1-219ENST00000523427 FOPNLQ96NB1 174 aa24.65■■□□□ 1.54
PVT1-219ENST00000523427 PANX3Q96QZ0 392 aa24.65■■□□□ 1.54
PVT1-219ENST00000523427 TRIM5Q9C035 493 aa24.65■■□□□ 1.54
PVT1-219ENST00000523427 ENAMQ9NRM1 1142 aa24.65■■□□□ 1.54
PVT1-219ENST00000523427 RIC8BQ9NVN3 520 aa24.65■■□□□ 1.54
PVT1-219ENST00000523427 A0A1W2PPV9 198 aa24.64■■□□□ 1.54
PVT1-219ENST00000523427 CD3EAPO15446 510 aaKnown RBP24.64■■□□□ 1.54
PVT1-219ENST00000523427 CRYABP02511 175 aaKnown RBP24.64■■□□□ 1.54
PVT1-219ENST00000523427 RIPPLY3P57055 190 aa24.64■■□□□ 1.54
PVT1-219ENST00000523427 ACVR1Q04771 509 aa24.64■■□□□ 1.54
PVT1-219ENST00000523427 KLF1Q13351 362 aaPredicted RBP24.64■■□□□ 1.54
PVT1-219ENST00000523427 SYT16Q17RD7 645 aa24.64■■□□□ 1.54
PVT1-219ENST00000523427 HKDC1Q2TB90 917 aa24.64■■□□□ 1.54
PVT1-219ENST00000523427 SUSD1Q6UWL2 747 aa24.64■■□□□ 1.54
PVT1-219ENST00000523427 BNC2Q6ZN30 1099 aaPredicted RBP24.64■■□□□ 1.54
PVT1-219ENST00000523427 OTUD6BQ8N6M0 293 aa24.64■■□□□ 1.54
PVT1-219ENST00000523427 CSNK1A1LQ8N752 337 aa24.64■■□□□ 1.54
PVT1-219ENST00000523427 LRRC57Q8N9N7 239 aa24.64■■□□□ 1.54
PVT1-219ENST00000523427 PPHLN1Q8NEY8 458 aaKnown RBP24.64■■□□□ 1.54
PVT1-219ENST00000523427 CALR3Q96L12 384 aaKnown RBP24.64■■□□□ 1.54
PVT1-219ENST00000523427 CHST11Q9NPF2 352 aa24.64■■□□□ 1.54
PVT1-219ENST00000523427 GNPTGQ9UJJ9 305 aa24.64■■□□□ 1.54
PVT1-219ENST00000523427 RIMKLBQ9ULI2 386 aa24.64■■□□□ 1.54
PVT1-219ENST00000523427 RUVBL1Q9Y265 456 aaKnown RBP24.64■■□□□ 1.54
PVT1-219ENST00000523427 PCNX1Q96RV3 2341 aa24.64■■□□□ 1.53
PVT1-219ENST00000523427 CCDC168Q8NDH2 2452 aa24.63■■□□□ 1.53
PVT1-219ENST00000523427 IGLV3-12A0A075B6K2 115 aa24.63■■□□□ 1.53
PVT1-219ENST00000523427 ERI2A8K979 691 aaKnown RBP24.63■■□□□ 1.53
PVT1-219ENST00000523427 A8MUI8 341 aa24.63■■□□□ 1.53
PVT1-219ENST00000523427 NDUFS3O75489 264 aa24.63■■□□□ 1.53
PVT1-219ENST00000523427 ANXA5P08758 320 aa24.63■■□□□ 1.53
PVT1-219ENST00000523427 ETS1P14921 441 aa24.63■■□□□ 1.53
PVT1-219ENST00000523427 CA7P43166 264 aa24.63■■□□□ 1.53
PVT1-219ENST00000523427 TTPAP49638 278 aa24.63■■□□□ 1.53
PVT1-219ENST00000523427 EIF3BP55884 814 aaKnown RBP24.63■■□□□ 1.53
PVT1-219ENST00000523427 ZNF33BQ06732 778 aa24.63■■□□□ 1.53
PVT1-219ENST00000523427 DSG2Q14126 1118 aa24.63■■□□□ 1.53
PVT1-219ENST00000523427 ZNF630Q2M218 657 aaPredicted RBP24.63■■□□□ 1.53
PVT1-219ENST00000523427 PRTGQ2VWP7 1150 aa24.63■■□□□ 1.53
PVT1-219ENST00000523427 ABHD17BQ5VST6 288 aa24.63■■□□□ 1.53
PVT1-219ENST00000523427 MRFAP1L1Q96HT8 127 aa24.63■■□□□ 1.53
PVT1-219ENST00000523427 CHRAC1Q9NRG0 131 aa24.63■■□□□ 1.53
PVT1-219ENST00000523427 ABCF3Q9NUQ8 709 aa24.63■■□□□ 1.53
PVT1-219ENST00000523427 ABI3Q9P2A4 366 aa24.63■■□□□ 1.53
PVT1-219ENST00000523427 REXO2Q9Y3B8 237 aaKnown RBP24.63■■□□□ 1.53
PVT1-219ENST00000523427 OR2A25A4D2G3 310 aa24.62■■□□□ 1.53
PVT1-219ENST00000523427 WISP2O76076 250 aa24.62■■□□□ 1.53
PVT1-219ENST00000523427 FTCDO95954 541 aa24.62■■□□□ 1.53
PVT1-219ENST00000523427 RBPJQ06330 500 aa24.62■■□□□ 1.53
PVT1-219ENST00000523427 LRRC8BQ6P9F7 803 aa24.62■■□□□ 1.53
PVT1-219ENST00000523427 NEK10Q6ZWH5 1172 aa24.62■■□□□ 1.53
PVT1-219ENST00000523427 ACRBPQ8NEB7 543 aa24.62■■□□□ 1.53
PVT1-219ENST00000523427 HMGCLL1Q8TB92 370 aa24.62■■□□□ 1.53
PVT1-219ENST00000523427 SYNPO2LQ9H987 977 aa24.62■■□□□ 1.53
PVT1-219ENST00000523427 MRPS30Q9NP92 439 aaKnown RBP24.62■■□□□ 1.53
PVT1-219ENST00000523427 RAB6BQ9NRW1 208 aa24.62■■□□□ 1.53
PVT1-219ENST00000523427 STMN3Q9NZ72 180 aa24.62■■□□□ 1.53
PVT1-219ENST00000523427 MKL2Q9ULH7 1088 aa24.62■■□□□ 1.53
PVT1-219ENST00000523427 KLK4Q9Y5K2 254 aa24.62■■□□□ 1.53
PVT1-219ENST00000523427 MRFAP1Q9Y605 127 aa24.62■■□□□ 1.53
PVT1-219ENST00000523427 A0A0A6YYC8 382 aaPredicted RBP24.61■■□□□ 1.53
PVT1-219ENST00000523427 A0A0U1RQJ8 604 aa24.61■■□□□ 1.53
PVT1-219ENST00000523427 I3L1I5 382 aaPredicted RBP24.61■■□□□ 1.53
PVT1-219ENST00000523427 PRPF4O43172 522 aaKnown RBP eCLIP24.61■■□□□ 1.538e-9■■■□□ 16.1
PVT1-219ENST00000523427 PRAMEF2O60811 474 aa24.61■■□□□ 1.53
PVT1-219ENST00000523427 VPS26AO75436 327 aa24.61■■□□□ 1.53
PVT1-219ENST00000523427 SUN1O94901 812 aa24.61■■□□□ 1.53
PVT1-219ENST00000523427 PTGER4P35408 488 aa24.61■■□□□ 1.53
PVT1-219ENST00000523427 FDFT1P37268 417 aa24.61■■□□□ 1.53
PVT1-219ENST00000523427 CCNFP41002 786 aa24.61■■□□□ 1.53
PVT1-219ENST00000523427 ST13P50502 369 aaKnown RBP24.61■■□□□ 1.53
PVT1-219ENST00000523427 SESN2P58004 480 aaPredicted RBP24.61■■□□□ 1.53
PVT1-219ENST00000523427 CRADDP78560 199 aa24.61■■□□□ 1.53
PVT1-219ENST00000523427 MAT1AQ00266 395 aaKnown RBP24.61■■□□□ 1.53
PVT1-219ENST00000523427 MTFR2Q6P444 385 aa24.61■■□□□ 1.53
PVT1-219ENST00000523427 RIPOR1Q6ZS17 1223 aa24.61■■□□□ 1.53
PVT1-219ENST00000523427 DNAJB8Q8NHS0 232 aa24.61■■□□□ 1.53
PVT1-219ENST00000523427 P2RY12Q9H244 342 aa24.61■■□□□ 1.53
PVT1-219ENST00000523427 C14orf105Q9NVL8 296 aa24.61■■□□□ 1.53
PVT1-219ENST00000523427 IGHV3-20A0A0C4DH32 117 aa24.6■■□□□ 1.53
PVT1-219ENST00000523427 OR5H15A6NDH6 313 aa24.6■■□□□ 1.53
PVT1-219ENST00000523427 FAM227AF5H4B4 570 aa24.6■■□□□ 1.53
PVT1-219ENST00000523427 KPNA5O15131 536 aa24.6■■□□□ 1.53
PVT1-219ENST00000523427 APRTP07741 180 aa24.6■■□□□ 1.53
PVT1-219ENST00000523427 ESRRAP11474 423 aaPredicted RBP24.6■■□□□ 1.53
PVT1-219ENST00000523427 RPA3P35244 121 aaPredicted RBP24.6■■□□□ 1.53
PVT1-219ENST00000523427 CASP6P55212 293 aa24.6■■□□□ 1.53
PVT1-219ENST00000523427 PCOLCEQ15113 449 aa24.6■■□□□ 1.53
PVT1-219ENST00000523427 FCRLBQ6BAA4 426 aa24.6■■□□□ 1.53
PVT1-219ENST00000523427 RPTNQ6XPR3 784 aa24.6■■□□□ 1.53
PVT1-219ENST00000523427 KIAA1328Q86T90 577 aa24.6■■□□□ 1.53
PVT1-219ENST00000523427 AMER3Q8N944 861 aa24.6■■□□□ 1.53
PVT1-219ENST00000523427 MAGEC3Q8TD91 643 aa24.6■■□□□ 1.53
PVT1-219ENST00000523427 ZNF700Q9H0M5 742 aa24.6■■□□□ 1.53
PVT1-219ENST00000523427 MKKSQ9NPJ1 570 aaPredicted RBP24.6■■□□□ 1.53
PVT1-219ENST00000523427 SPATA7Q9P0W8 599 aa24.6■■□□□ 1.53
PVT1-219ENST00000523427 ZNF148Q9UQR1 794 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms