RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 OLFM3Q96PB7 478 aa13.08□□□□□ -0.32
NKX3-1-202ENST00000523261 RNF157Q96PX1 679 aa13.08□□□□□ -0.32
NKX3-1-202ENST00000523261 FICDQ9BVA6 458 aa13.08□□□□□ -0.32
NKX3-1-202ENST00000523261 ISCUQ9H1K1 167 aa13.08□□□□□ -0.32
NKX3-1-202ENST00000523261 PLEKHF2Q9H8W4 249 aa13.08□□□□□ -0.32
NKX3-1-202ENST00000523261 BEX4Q9NWD9 120 aaPredicted RBP13.08□□□□□ -0.32
NKX3-1-202ENST00000523261 ZDHHC3Q9NYG2 299 aa13.08□□□□□ -0.32
NKX3-1-202ENST00000523261 TRPS1Q9UHF7 1281 aa13.08□□□□□ -0.32
NKX3-1-202ENST00000523261 ANAPC7Q9UJX3 599 aa13.08□□□□□ -0.32
NKX3-1-202ENST00000523261 CDC14AQ9UNH5 594 aa13.08□□□□□ -0.32
NKX3-1-202ENST00000523261 MPDZO75970 2070 aa13.08□□□□□ -0.32
NKX3-1-202ENST00000523261 A0A0J9YVX5 310 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 TARM1B6A8C7 271 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 PRPF4O43172 522 aaKnown RBP eCLIP13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 HS6ST1O60243 411 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 KDM1AO60341 852 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 NRP2O60462 931 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 PRMT3O60678 531 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 CRLF1O75462 422 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 S1PR4O95977 384 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 EIF2S1P05198 315 aaKnown RBP13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 TPM2P07951 284 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 NFKB1P19838 968 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 CD9P21926 228 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 SLC26A3P40879 764 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 TNNT3P45378 269 aaPredicted RBP13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 PDK1Q15118 436 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 PCBP2Q15366 365 aaKnown RBP eCLIP13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 TAF1AQ15573 450 aaPredicted RBP13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 SF1Q15637 639 aaKnown RBP13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 PRTGQ2VWP7 1150 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 FIGNQ5HY92 759 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 ARHGAP11AQ6P4F7 1023 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 LANCL3Q6ZV70 420 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 CPEB2Q7Z5Q1 589 aaKnown RBP13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 ARMC2Q8NEN0 867 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 OR5M3Q8NGP4 307 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 OR10Q1Q8NGQ4 319 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 FAM222BQ8WU58 562 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 ZUFSPQ96AP4 578 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 MVB12AQ96EY5 273 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 OXNAD1Q96HP4 312 aaPredicted RBP13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 CABS1Q96KC9 395 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 SARGQ9BW04 601 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 HAUS4Q9H6D7 363 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 KLK4Q9Y5K2 254 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 ARID1AO14497 2285 aa13.07□□□□□ -0.32
NKX3-1-202ENST00000523261 A0A0G2JNJ9 132 aa13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 C2orf81A6NN90 581 aa13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 SMAD7O15105 426 aaKnown RBP13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 ARHGEF9O43307 516 aa13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 WIPF1O43516 503 aa13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 ITGALP20701 1170 aa13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 PEX19P40855 299 aa13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 RFC3P40938 356 aa13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 PRKCIP41743 596 aa13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 CDKN1CP49918 316 aaPredicted RBP13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 EMP3P54852 163 aa13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 DAZAP2Q15038 168 aaPredicted RBP13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 BRD3Q15059 726 aa13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 SYT16Q17RD7 645 aa13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 SLC25A35Q3KQZ1 300 aa13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 Q5PR19 223 aa13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 RNF44Q7L0R7 432 aa13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 SNX20Q7Z614 316 aa13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 CXorf67Q86X51 503 aaPredicted RBP13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 IPMKQ8NFU5 416 aa13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 OR13C4Q8NGS5 318 aa13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 METTL21AQ8WXB1 218 aa13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 IL17FQ96PD4 163 aa13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 ERGIC2Q96RQ1 377 aa13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 TTYH2Q9BSA4 534 aa13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 VN1R1Q9GZP7 353 aa13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 Q9UFV3 132 aa13.06□□□□□ -0.32
NKX3-1-202ENST00000523261 TRBV5-4A0A0C4DH59 114 aa13.05□□□□□ -0.32
NKX3-1-202ENST00000523261 SLC5A10A0PJK1 596 aa13.05□□□□□ -0.32
NKX3-1-202ENST00000523261 LGALS16A8MUM7 142 aa13.05□□□□□ -0.32
NKX3-1-202ENST00000523261 PPP1R12AO14974 1030 aaPredicted RBP13.05□□□□□ -0.32
NKX3-1-202ENST00000523261 FKBP9O95302 570 aa13.05□□□□□ -0.32
NKX3-1-202ENST00000523261 GLI4P10075 376 aa13.05□□□□□ -0.32
NKX3-1-202ENST00000523261 NR0B1P51843 470 aaKnown RBP13.05□□□□□ -0.32
NKX3-1-202ENST00000523261 TAS2R40P59535 323 aa13.05□□□□□ -0.32
NKX3-1-202ENST00000523261 GRB7Q14451 532 aa13.05□□□□□ -0.32
NKX3-1-202ENST00000523261 SLC9A4Q6AI14 798 aa13.05□□□□□ -0.32
NKX3-1-202ENST00000523261 NPNTQ6UXI9 565 aa13.05□□□□□ -0.32
NKX3-1-202ENST00000523261 C16orf47Q6ZP98 133 aaPredicted RBP13.05□□□□□ -0.32
NKX3-1-202ENST00000523261 MICALCLQ6ZW33 695 aa13.05□□□□□ -0.32
NKX3-1-202ENST00000523261 PAQR7Q86WK9 346 aa13.05□□□□□ -0.32
NKX3-1-202ENST00000523261 LGI4Q8N135 537 aa13.05□□□□□ -0.32
NKX3-1-202ENST00000523261 SLC5A8Q8N695 610 aa13.05□□□□□ -0.32
NKX3-1-202ENST00000523261 OR2L8Q8NGY9 312 aa13.05□□□□□ -0.32
NKX3-1-202ENST00000523261 C16orf52Q8NHV5 167 aa13.05□□□□□ -0.32
NKX3-1-202ENST00000523261 M1APQ8TC57 530 aa13.05□□□□□ -0.32
NKX3-1-202ENST00000523261 MMABQ96EY8 250 aaPredicted RBP13.05□□□□□ -0.32
NKX3-1-202ENST00000523261 CYTH2Q99418 400 aa13.05□□□□□ -0.32
NKX3-1-202ENST00000523261 MMP25Q9NPA2 562 aa13.05□□□□□ -0.32
NKX3-1-202ENST00000523261 CIDEBQ9UHD4 219 aa13.05□□□□□ -0.32
NKX3-1-202ENST00000523261 MYO6Q9UM54 1294 aa13.05□□□□□ -0.32
NKX3-1-202ENST00000523261 CUBNO60494 3623 aa13.04□□□□□ -0.32
NKX3-1-202ENST00000523261 MYO1FO00160 1098 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms