RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 PIWIL4Q7Z3Z4 852 aaKnown RBP15.5■□□□□ 0.07
CLN8-206ENST00000523237 PAQR7Q86WK9 346 aa15.5■□□□□ 0.07
CLN8-206ENST00000523237 SPNS2Q8IVW8 549 aa15.5■□□□□ 0.07
CLN8-206ENST00000523237 CNTN4Q8IWV2 1026 aa15.5■□□□□ 0.07
CLN8-206ENST00000523237 METTL27Q8N6F8 245 aaPredicted RBP15.5■□□□□ 0.07
CLN8-206ENST00000523237 LRRC39Q96DD0 335 aa15.5■□□□□ 0.07
CLN8-206ENST00000523237 SMAD5Q99717 465 aaKnown RBP15.5■□□□□ 0.07
CLN8-206ENST00000523237 ZNF304Q9HCX3 659 aa15.5■□□□□ 0.07
CLN8-206ENST00000523237 PPANQ9NQ55 473 aaKnown RBP15.5■□□□□ 0.07
CLN8-206ENST00000523237 ABCF3Q9NUQ8 709 aa15.5■□□□□ 0.07
CLN8-206ENST00000523237 CDC23Q9UJX2 597 aa15.5■□□□□ 0.07
CLN8-206ENST00000523237 MAU2Q9Y6X3 613 aa15.5■□□□□ 0.07
CLN8-206ENST00000523237 IGKV1-8A0A0C4DH67 115 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 TTLL8A6PVC2 850 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 H0YGG7 62 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 C8GP07360 202 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 EZRP15311 586 aaKnown RBP15.49■□□□□ 0.07
CLN8-206ENST00000523237 IMPA1P29218 277 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 ELK3P41970 407 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 CARSP49589 748 aaKnown RBP15.49■□□□□ 0.07
CLN8-206ENST00000523237 EMP3P54852 163 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 ARF3P61204 181 aaPredicted RBP15.49■□□□□ 0.07
CLN8-206ENST00000523237 RAPSNQ13702 412 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 HIF1AQ16665 826 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 PRTGQ2VWP7 1150 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 NADK2Q4G0N4 442 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 HIBCHQ6NVY1 386 aaPredicted RBP15.49■□□□□ 0.07
CLN8-206ENST00000523237 ADCK2Q7Z695 626 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 GALNT7Q86SF2 657 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 ATCAYQ86WG3 371 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 IGDCC3Q8IVU1 814 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 PALM2Q8IXS6 379 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 MYO1HQ8N1T3 1032 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 GALNT16Q8N428 558 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 MCOLN3Q8TDD5 553 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 EEF1AKMT1Q8WVE0 214 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 RERGQ96A58 199 aaPredicted RBP15.49■□□□□ 0.07
CLN8-206ENST00000523237 COL26A1Q96A83 441 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 MIB2Q96AX9 1013 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 CABS1Q96KC9 395 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 SPSB2Q99619 263 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 C5AR2Q9P296 337 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 RNF14Q9UBS8 474 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 CTSFQ9UBX1 484 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 PYCARDQ9ULZ3 195 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 CHMP2BQ9UQN3 213 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 PLAAQ9Y263 795 aa15.49■□□□□ 0.07
CLN8-206ENST00000523237 TTI1O43156 1089 aa15.48■□□□□ 0.07
CLN8-206ENST00000523237 AHSGP02765 367 aa15.48■□□□□ 0.07
CLN8-206ENST00000523237 ALPPP05187 535 aa15.48■□□□□ 0.07
CLN8-206ENST00000523237 GABRB3P28472 473 aa15.48■□□□□ 0.07
CLN8-206ENST00000523237 ITGA8P53708 1063 aa15.48■□□□□ 0.07
CLN8-206ENST00000523237 ARL4CP56559 192 aa15.48■□□□□ 0.07
CLN8-206ENST00000523237 RELAQ04206 551 aa15.48■□□□□ 0.07
CLN8-206ENST00000523237 OCA2Q04671 838 aa15.48■□□□□ 0.07
CLN8-206ENST00000523237 AIMP2Q13155 320 aaKnown RBP15.48■□□□□ 0.07
CLN8-206ENST00000523237 SP140Q13342 867 aa15.48■□□□□ 0.07
CLN8-206ENST00000523237 MYBPC3Q14896 1274 aa15.48■□□□□ 0.07
CLN8-206ENST00000523237 HP1BP3Q5SSJ5 553 aaPredicted RBP15.48■□□□□ 0.07
CLN8-206ENST00000523237 RBM20Q5T481 1227 aaKnown RBP15.48■□□□□ 0.07
CLN8-206ENST00000523237 SHISA6Q6ZSJ9 500 aa15.48■□□□□ 0.07
CLN8-206ENST00000523237 TMEM151BQ8IW70 566 aa15.48■□□□□ 0.07
CLN8-206ENST00000523237 LRRC56Q8IYG6 542 aaPredicted RBP15.48■□□□□ 0.07
CLN8-206ENST00000523237 DTWD1Q8N5C7 304 aa15.48■□□□□ 0.07
CLN8-206ENST00000523237 CSNK1A1LQ8N752 337 aa15.48■□□□□ 0.07
CLN8-206ENST00000523237 EFCAB3Q8N7B9 438 aa15.48■□□□□ 0.07
CLN8-206ENST00000523237 MVB12AQ96EY5 273 aa15.48■□□□□ 0.07
CLN8-206ENST00000523237 CFAP36Q96G28 342 aa15.48■□□□□ 0.07
CLN8-206ENST00000523237 SNF8Q96H20 258 aa15.48■□□□□ 0.07
CLN8-206ENST00000523237 VPS50Q96JG6 964 aa15.48■□□□□ 0.07
CLN8-206ENST00000523237 C10orf90Q96M02 699 aa15.48■□□□□ 0.07
CLN8-206ENST00000523237 CCDC138Q96M89 665 aa15.48■□□□□ 0.07
CLN8-206ENST00000523237 TRIM51Q9BSJ1 452 aa15.48■□□□□ 0.07
CLN8-206ENST00000523237 SOX17Q9H6I2 414 aaPredicted RBP15.48■□□□□ 0.07
CLN8-206ENST00000523237 ATP13A2Q9NQ11 1180 aa15.48■□□□□ 0.07
CLN8-206ENST00000523237 CCDC177Q9NQR7 707 aaPredicted RBP15.48■□□□□ 0.07
CLN8-206ENST00000523237 SEMA3GQ9NS98 782 aa15.48■□□□□ 0.07
CLN8-206ENST00000523237 ZNF282Q9UDV7 671 aaPredicted RBP15.48■□□□□ 0.07
CLN8-206ENST00000523237 CORO1CQ9ULV4 474 aaPredicted RBP15.48■□□□□ 0.07
CLN8-206ENST00000523237 CDC14AQ9UNH5 594 aa15.48■□□□□ 0.07
CLN8-206ENST00000523237 SETXQ7Z333 2677 aaKnown RBP15.47■□□□□ 0.07
CLN8-206ENST00000523237 VSTM2BA6NLU5 285 aa15.47■□□□□ 0.07
CLN8-206ENST00000523237 TXNDC9O14530 226 aa15.47■□□□□ 0.07
CLN8-206ENST00000523237 SLC16A5O15375 505 aa15.47■□□□□ 0.07
CLN8-206ENST00000523237 PRPF4O43172 522 aaKnown RBP eCLIP15.47■□□□□ 0.07
CLN8-206ENST00000523237 IPO13O94829 963 aaKnown RBP15.47■□□□□ 0.07
CLN8-206ENST00000523237 SEC31AO94979 1220 aaKnown RBP15.47■□□□□ 0.07
CLN8-206ENST00000523237 MED26O95402 600 aa15.47■□□□□ 0.07
CLN8-206ENST00000523237 HRH2P25021 359 aa15.47■□□□□ 0.07
CLN8-206ENST00000523237 CD97P48960 835 aa15.47■□□□□ 0.07
CLN8-206ENST00000523237 CDKN2DP55273 166 aa15.47■□□□□ 0.07
CLN8-206ENST00000523237 SOX8P57073 446 aa15.47■□□□□ 0.07
CLN8-206ENST00000523237 TIAL1Q01085 375 aaKnown RBP eCLIP15.47■□□□□ 0.07
CLN8-206ENST00000523237 PDAP1Q13442 181 aaKnown RBP15.47■□□□□ 0.07
CLN8-206ENST00000523237 RBBP7Q16576 425 aa15.47■□□□□ 0.07
CLN8-206ENST00000523237 TEDDM1Q5T9Z0 273 aa15.47■□□□□ 0.07
CLN8-206ENST00000523237 GARNL3Q5VVW2 1013 aa15.47■□□□□ 0.07
CLN8-206ENST00000523237 JMJD6Q6NYC1 403 aaPredicted RBP15.47■□□□□ 0.07
CLN8-206ENST00000523237 PAQR3Q6TCH7 311 aa15.47■□□□□ 0.07
CLN8-206ENST00000523237 CPT1CQ8TCG5 803 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms