RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 CHRM3P20309 590 aa14.69□□□□□ -0.06
MRPS28-209ENST00000522987 RPS3P23396 243 aaKnown RBP eCLIP14.69□□□□□ -0.062e-9■■■■■ 65.8
MRPS28-209ENST00000522987 RPA3P35244 121 aaPredicted RBP14.69□□□□□ -0.06
MRPS28-209ENST00000522987 EMP2P54851 167 aa14.69□□□□□ -0.06
MRPS28-209ENST00000522987 SNRPNP63162 240 aaKnown RBP14.69□□□□□ -0.06
MRPS28-209ENST00000522987 ARG2P78540 354 aa14.69□□□□□ -0.06
MRPS28-209ENST00000522987 TLR1Q15399 786 aa14.69□□□□□ -0.06
MRPS28-209ENST00000522987 RPS6KA1Q15418 735 aa14.69□□□□□ -0.06
MRPS28-209ENST00000522987 MUM1Q2TAK8 710 aa14.69□□□□□ -0.06
MRPS28-209ENST00000522987 B3GNTL1Q67FW5 361 aaPredicted RBP14.69□□□□□ -0.06
MRPS28-209ENST00000522987 SHISA5Q8N114 240 aa14.69□□□□□ -0.06
MRPS28-209ENST00000522987 TXLNBQ8N3L3 684 aa14.69□□□□□ -0.06
MRPS28-209ENST00000522987 MPP5Q8N3R9 675 aa14.69□□□□□ -0.06
MRPS28-209ENST00000522987 LPGAT1Q92604 370 aa14.69□□□□□ -0.06
MRPS28-209ENST00000522987 MMABQ96EY8 250 aaPredicted RBP14.69□□□□□ -0.06
MRPS28-209ENST00000522987 FRMD8P1Q9BZ68 369 aaPredicted RBP14.69□□□□□ -0.06
MRPS28-209ENST00000522987 TAC3Q9UHF0 121 aa14.69□□□□□ -0.06
MRPS28-209ENST00000522987 RUVBL1Q9Y265 456 aaKnown RBP14.69□□□□□ -0.06
MRPS28-209ENST00000522987 PCNX1Q96RV3 2341 aa14.68□□□□□ -0.06
MRPS28-209ENST00000522987 IDSB3KWA1 339 aa14.68□□□□□ -0.06
MRPS28-209ENST00000522987 KPNA5O15131 536 aa14.68□□□□□ -0.06
MRPS28-209ENST00000522987 SYF2O95926 243 aaKnown RBP14.68□□□□□ -0.06
MRPS28-209ENST00000522987 PRR35P0CG20 571 aa14.68□□□□□ -0.06
MRPS28-209ENST00000522987 COX6A1P12074 109 aa14.68□□□□□ -0.06
MRPS28-209ENST00000522987 CCNFP41002 786 aa14.68□□□□□ -0.06
MRPS28-209ENST00000522987 NPY2RP49146 381 aa14.68□□□□□ -0.06
MRPS28-209ENST00000522987 CARSP49589 748 aaKnown RBP14.68□□□□□ -0.06
MRPS28-209ENST00000522987 MAT1AQ00266 395 aaKnown RBP14.68□□□□□ -0.06
MRPS28-209ENST00000522987 CUL1Q13616 776 aa14.68□□□□□ -0.06
MRPS28-209ENST00000522987 KCNJ11Q14654 390 aa14.68□□□□□ -0.06
MRPS28-209ENST00000522987 PRTGQ2VWP7 1150 aa14.68□□□□□ -0.06
MRPS28-209ENST00000522987 KLHL38Q2WGJ6 581 aa14.68□□□□□ -0.06
MRPS28-209ENST00000522987 ADCK2Q7Z695 626 aa14.68□□□□□ -0.06
MRPS28-209ENST00000522987 LRRC6Q86X45 466 aa14.68□□□□□ -0.06
MRPS28-209ENST00000522987 KBTBD2Q8IY47 623 aa14.68□□□□□ -0.06
MRPS28-209ENST00000522987 CSNK1A1LQ8N752 337 aa14.68□□□□□ -0.06
MRPS28-209ENST00000522987 OR9A1PQ8NGU1 263 aa14.68□□□□□ -0.06
MRPS28-209ENST00000522987 PEX13Q92968 403 aa14.68□□□□□ -0.06
MRPS28-209ENST00000522987 NACC2Q96BF6 587 aa14.68□□□□□ -0.06
MRPS28-209ENST00000522987 PKP4Q99569 1192 aa14.68□□□□□ -0.06
MRPS28-209ENST00000522987 SLC30A3Q99726 388 aa14.68□□□□□ -0.06
MRPS28-209ENST00000522987 IL22Q9GZX6 179 aa14.68□□□□□ -0.06
MRPS28-209ENST00000522987 OLAHQ9NV23 265 aa14.68□□□□□ -0.06
MRPS28-209ENST00000522987 SPATA7Q9P0W8 599 aa14.68□□□□□ -0.06
MRPS28-209ENST00000522987 PCYOX1Q9UHG3 505 aa14.68□□□□□ -0.06
MRPS28-209ENST00000522987 LRBAP50851 2863 aa14.67□□□□□ -0.06
MRPS28-209ENST00000522987 A0A0A6YYC8 382 aaPredicted RBP14.67□□□□□ -0.06
MRPS28-209ENST00000522987 IGKV1-8A0A0C4DH67 115 aa14.67□□□□□ -0.06
MRPS28-209ENST00000522987 E5RI56 91 aa14.67□□□□□ -0.06
MRPS28-209ENST00000522987 I3L1I5 382 aaPredicted RBP14.67□□□□□ -0.06
MRPS28-209ENST00000522987 P2RX6O15547 441 aa14.67□□□□□ -0.06
MRPS28-209ENST00000522987 JRKO75564 520 aa14.67□□□□□ -0.06
MRPS28-209ENST00000522987 MATN4O95460 622 aa14.67□□□□□ -0.06
MRPS28-209ENST00000522987 HEXBP07686 556 aa14.67□□□□□ -0.06
MRPS28-209ENST00000522987 EDN3P14138 238 aa14.67□□□□□ -0.06
MRPS28-209ENST00000522987 EFNA3P52797 238 aa14.67□□□□□ -0.06
MRPS28-209ENST00000522987 CCNG2Q16589 344 aa14.67□□□□□ -0.06
MRPS28-209ENST00000522987 ANKRD20A4Q4UJ75 823 aa14.67□□□□□ -0.06
MRPS28-209ENST00000522987 MEI1Q5TIA1 1274 aa14.67□□□□□ -0.06
MRPS28-209ENST00000522987 ATG9BQ674R7 924 aa14.67□□□□□ -0.06
MRPS28-209ENST00000522987 MRNIPQ6NTE8 343 aa14.67□□□□□ -0.06
MRPS28-209ENST00000522987 PRMT9Q6P2P2 845 aa14.67□□□□□ -0.06
MRPS28-209ENST00000522987 CASC4Q6P4E1 433 aa14.67□□□□□ -0.06
MRPS28-209ENST00000522987 LRRC8BQ6P9F7 803 aa14.67□□□□□ -0.06
MRPS28-209ENST00000522987 SDCCAG8Q86SQ7 713 aaPredicted RBP14.67□□□□□ -0.06
MRPS28-209ENST00000522987 PAQR7Q86WK9 346 aa14.67□□□□□ -0.06
MRPS28-209ENST00000522987 RNF10Q8N5U6 811 aaKnown RBP14.67□□□□□ -0.06
MRPS28-209ENST00000522987 HMGCLL1Q8TB92 370 aa14.67□□□□□ -0.06
MRPS28-209ENST00000522987 MAGEC3Q8TD91 643 aa14.67□□□□□ -0.06
MRPS28-209ENST00000522987 PSMF1Q92530 271 aa14.67□□□□□ -0.06
MRPS28-209ENST00000522987 VPS50Q96JG6 964 aa14.67□□□□□ -0.06
MRPS28-209ENST00000522987 TAAR6Q96RI8 345 aa14.67□□□□□ -0.06
MRPS28-209ENST00000522987 PLCD4Q9BRC7 762 aa14.67□□□□□ -0.06
MRPS28-209ENST00000522987 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.67□□□□□ -0.06
MRPS28-209ENST00000522987 EIF2B3Q9NR50 452 aaKnown RBP14.67□□□□□ -0.06
MRPS28-209ENST00000522987 SH3BGRL2Q9UJC5 107 aa14.67□□□□□ -0.06
MRPS28-209ENST00000522987 MRPS2Q9Y399 296 aaKnown RBP14.67□□□□□ -0.06
MRPS28-209ENST00000522987 IGHV3-20A0A0C4DH32 117 aa14.66□□□□□ -0.06
MRPS28-209ENST00000522987 DYTNA2CJ06 578 aa14.66□□□□□ -0.06
MRPS28-209ENST00000522987 HAT1O14929 419 aa14.66□□□□□ -0.06
MRPS28-209ENST00000522987 FKBP9O95302 570 aa14.66□□□□□ -0.06
MRPS28-209ENST00000522987 FGGP02679 453 aa14.66□□□□□ -0.06
MRPS28-209ENST00000522987 ITGAMP11215 1152 aa14.66□□□□□ -0.06
MRPS28-209ENST00000522987 PRF1P14222 555 aa14.66□□□□□ -0.06
MRPS28-209ENST00000522987 CXCR2P25025 360 aa14.66□□□□□ -0.06
MRPS28-209ENST00000522987 CXCR5P32302 372 aa14.66□□□□□ -0.06
MRPS28-209ENST00000522987 PNLIPRP1P54315 467 aa14.66□□□□□ -0.06
MRPS28-209ENST00000522987 PER3P56645 1201 aa14.66□□□□□ -0.06
MRPS28-209ENST00000522987 GBX1Q14549 363 aa14.66□□□□□ -0.06
MRPS28-209ENST00000522987 CENPUQ71F23 418 aa14.66□□□□□ -0.06
MRPS28-209ENST00000522987 NDUFAF7Q7L592 441 aa14.66□□□□□ -0.06
MRPS28-209ENST00000522987 AMER3Q8N944 861 aa14.66□□□□□ -0.06
MRPS28-209ENST00000522987 SMPDL3AQ92484 453 aa14.66□□□□□ -0.06
MRPS28-209ENST00000522987 MACROD1Q9BQ69 325 aa14.66□□□□□ -0.06
MRPS28-209ENST00000522987 KIFC1Q9BW19 673 aa14.66□□□□□ -0.06
MRPS28-209ENST00000522987 LZTFL1Q9NQ48 299 aa14.66□□□□□ -0.06
MRPS28-209ENST00000522987 FBXO6Q9NRD1 293 aaPredicted RBP14.66□□□□□ -0.06
MRPS28-209ENST00000522987 SOX13Q9UN79 622 aa14.66□□□□□ -0.06
MRPS28-209ENST00000522987 MRFAP1Q9Y605 127 aa14.66□□□□□ -0.06
MRPS28-209ENST00000522987 IGHV1-45A0A0A0MS14 117 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms