RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 PIM1P11309 404 aaPredicted RBP17.84■□□□□ 0.45
SPIDR-220ENST00000522900 IMPA1P29218 277 aa17.84■□□□□ 0.45
SPIDR-220ENST00000522900 ITGA8P53708 1063 aa17.84■□□□□ 0.45
SPIDR-220ENST00000522900 MORF4L2Q15014 288 aa17.84■□□□□ 0.45
SPIDR-220ENST00000522900 TEDDM1Q5T9Z0 273 aa17.84■□□□□ 0.45
SPIDR-220ENST00000522900 PAQR3Q6TCH7 311 aa17.84■□□□□ 0.45
SPIDR-220ENST00000522900 SYDE1Q6ZW31 735 aaPredicted RBP17.84■□□□□ 0.45
SPIDR-220ENST00000522900 CNTN4Q8IWV2 1026 aa17.84■□□□□ 0.45
SPIDR-220ENST00000522900 MIB2Q96AX9 1013 aa17.84■□□□□ 0.45
SPIDR-220ENST00000522900 CERS2Q96G23 380 aa17.84■□□□□ 0.45
SPIDR-220ENST00000522900 CFAP36Q96G28 342 aa17.84■□□□□ 0.45
SPIDR-220ENST00000522900 C10orf90Q96M02 699 aa17.84■□□□□ 0.45
SPIDR-220ENST00000522900 FER1L6-AS2Q96M78 137 aa17.84■□□□□ 0.45
SPIDR-220ENST00000522900 SMAD5Q99717 465 aaKnown RBP17.84■□□□□ 0.45
SPIDR-220ENST00000522900 MESP1Q9BRJ9 268 aa17.84■□□□□ 0.45
SPIDR-220ENST00000522900 TRIM31Q9BZY9 425 aa17.84■□□□□ 0.45
SPIDR-220ENST00000522900 SLC26A1Q9H2B4 701 aa17.84■□□□□ 0.45
SPIDR-220ENST00000522900 WDR54Q9H977 334 aa17.84■□□□□ 0.45
SPIDR-220ENST00000522900 CUEDC1Q9NWM3 386 aaPredicted RBP17.84■□□□□ 0.45
SPIDR-220ENST00000522900 LUZP4Q9P127 313 aa17.84■□□□□ 0.45
SPIDR-220ENST00000522900 TRMT6Q9UJA5 497 aaKnown RBP17.84■□□□□ 0.45
SPIDR-220ENST00000522900 CHMP2BQ9UQN3 213 aa17.84■□□□□ 0.45
SPIDR-220ENST00000522900 SETXQ7Z333 2677 aaKnown RBP17.83■□□□□ 0.44
SPIDR-220ENST00000522900 VSTM2BA6NLU5 285 aa17.83■□□□□ 0.44
SPIDR-220ENST00000522900 ALOX12BO75342 701 aa17.83■□□□□ 0.44
SPIDR-220ENST00000522900 MMP11P24347 488 aa17.83■□□□□ 0.44
SPIDR-220ENST00000522900 MRPS25P82663 173 aaKnown RBP17.83■□□□□ 0.44
SPIDR-220ENST00000522900 HKDC1Q2TB90 917 aa17.83■□□□□ 0.44
SPIDR-220ENST00000522900 MBOAT1Q6ZNC8 495 aa17.83■□□□□ 0.44
SPIDR-220ENST00000522900 PLD3Q8IV08 490 aa17.83■□□□□ 0.44
SPIDR-220ENST00000522900 PDIK1LQ8N165 341 aa17.83■□□□□ 0.44
SPIDR-220ENST00000522900 RBMXL3Q8N7X1 1067 aaKnown RBP17.83■□□□□ 0.44
SPIDR-220ENST00000522900 ANP32BQ92688 251 aaKnown RBP17.83■□□□□ 0.44
SPIDR-220ENST00000522900 COL26A1Q96A83 441 aa17.83■□□□□ 0.44
SPIDR-220ENST00000522900 OR2A5Q96R48 311 aa17.83■□□□□ 0.44
SPIDR-220ENST00000522900 NAT9Q9BTE0 207 aa17.83■□□□□ 0.44
SPIDR-220ENST00000522900 ZNF304Q9HCX3 659 aa17.83■□□□□ 0.44
SPIDR-220ENST00000522900 PPANQ9NQ55 473 aaKnown RBP17.83■□□□□ 0.44
SPIDR-220ENST00000522900 TAS2R13Q9NYV9 303 aa17.83■□□□□ 0.44
SPIDR-220ENST00000522900 ANKMY1Q9P2S6 941 aa17.83■□□□□ 0.44
SPIDR-220ENST00000522900 CDC23Q9UJX2 597 aa17.83■□□□□ 0.44
SPIDR-220ENST00000522900 PDE10AQ9Y233 779 aa17.83■□□□□ 0.44
SPIDR-220ENST00000522900 PCDHGB7Q9Y5F8 929 aa17.83■□□□□ 0.44
SPIDR-220ENST00000522900 TEX264Q9Y6I9 313 aa17.83■□□□□ 0.44
SPIDR-220ENST00000522900 TTLL8A6PVC2 850 aa17.82■□□□□ 0.44
SPIDR-220ENST00000522900 ZNF839A8K0R7 811 aa17.82■□□□□ 0.44
SPIDR-220ENST00000522900 H7BY64 318 aa17.82■□□□□ 0.44
SPIDR-220ENST00000522900 AGPSO00116 658 aa17.82■□□□□ 0.44
SPIDR-220ENST00000522900 EIF3FO00303 357 aaPredicted RBP17.82■□□□□ 0.44
SPIDR-220ENST00000522900 SOCS6O14544 535 aa17.82■□□□□ 0.44
SPIDR-220ENST00000522900 HAT1O14929 419 aa17.82■□□□□ 0.44
SPIDR-220ENST00000522900 SNRPNP63162 240 aaKnown RBP17.82■□□□□ 0.44
SPIDR-220ENST00000522900 NAA25Q14CX7 972 aa17.82■□□□□ 0.44
SPIDR-220ENST00000522900 THEMIS2Q5TEJ8 643 aa17.82■□□□□ 0.44
SPIDR-220ENST00000522900 UGT3A1Q6NUS8 523 aa17.82■□□□□ 0.44
SPIDR-220ENST00000522900 JMJD6Q6NYC1 403 aaPredicted RBP17.82■□□□□ 0.44
SPIDR-220ENST00000522900 ANKMY2Q8IV38 441 aa17.82■□□□□ 0.44
SPIDR-220ENST00000522900 PRSS58Q8IYP2 241 aa17.82■□□□□ 0.44
SPIDR-220ENST00000522900 GALNT16Q8N428 558 aa17.82■□□□□ 0.44
SPIDR-220ENST00000522900 CSNK1A1LQ8N752 337 aa17.82■□□□□ 0.44
SPIDR-220ENST00000522900 CLEC1AQ8NC01 280 aa17.82■□□□□ 0.44
SPIDR-220ENST00000522900 CABS1Q96KC9 395 aa17.82■□□□□ 0.44
SPIDR-220ENST00000522900 PRAP1Q96NZ9 151 aa17.82■□□□□ 0.44
SPIDR-220ENST00000522900 FBXL4Q9UKA2 621 aa17.82■□□□□ 0.44
SPIDR-220ENST00000522900 RUVBL1Q9Y265 456 aaKnown RBP17.82■□□□□ 0.44
SPIDR-220ENST00000522900 HS3ST3B1Q9Y662 390 aa17.82■□□□□ 0.44
SPIDR-220ENST00000522900 CCDC88CQ9P219 2028 aa17.82■□□□□ 0.44
SPIDR-220ENST00000522900 FFAR3O14843 346 aa17.81■□□□□ 0.44
SPIDR-220ENST00000522900 GPR42O15529 346 aa17.81■□□□□ 0.44
SPIDR-220ENST00000522900 SORBS2O94875 1100 aaKnown RBP17.81■□□□□ 0.44
SPIDR-220ENST00000522900 SEC31AO94979 1220 aaKnown RBP17.81■□□□□ 0.44
SPIDR-220ENST00000522900 CCNDBP1O95273 360 aa17.81■□□□□ 0.44
SPIDR-220ENST00000522900 STATHP02808 62 aa17.81■□□□□ 0.44
SPIDR-220ENST00000522900 PAFAH1B1P43034 410 aa17.81■□□□□ 0.44
SPIDR-220ENST00000522900 ABATP80404 500 aa17.81■□□□□ 0.44
SPIDR-220ENST00000522900 PHKG1Q16816 387 aa17.81■□□□□ 0.44
SPIDR-220ENST00000522900 MUM1Q2TAK8 710 aa17.81■□□□□ 0.44
SPIDR-220ENST00000522900 STEAP4Q687X5 459 aa17.81■□□□□ 0.44
SPIDR-220ENST00000522900 KIRREL2Q6UWL6 708 aa17.81■□□□□ 0.44
SPIDR-220ENST00000522900 KIAA0408Q6ZU52 694 aa17.81■□□□□ 0.44
SPIDR-220ENST00000522900 ADCK2Q7Z695 626 aa17.81■□□□□ 0.44
SPIDR-220ENST00000522900 ARHGEF39Q8N4T4 335 aa17.81■□□□□ 0.44
SPIDR-220ENST00000522900 Q8NA96 180 aa17.81■□□□□ 0.44
SPIDR-220ENST00000522900 STT3BQ8TCJ2 826 aa17.81■□□□□ 0.44
SPIDR-220ENST00000522900 MCOLN3Q8TDD5 553 aa17.81■□□□□ 0.44
SPIDR-220ENST00000522900 LINGO1Q96FE5 620 aa17.81■□□□□ 0.44
SPIDR-220ENST00000522900 RUNDC3BQ96NL0 473 aa17.81■□□□□ 0.44
SPIDR-220ENST00000522900 KRT12Q99456 494 aa17.81■□□□□ 0.44
SPIDR-220ENST00000522900 ATG10Q9H0Y0 220 aa17.81■□□□□ 0.44
SPIDR-220ENST00000522900 ZNF552Q9H707 407 aaPredicted RBP17.81■□□□□ 0.44
SPIDR-220ENST00000522900 G3BP2Q9UN86 482 aaKnown RBP17.81■□□□□ 0.44
SPIDR-220ENST00000522900 SH2B3Q9UQQ2 575 aa17.81■□□□□ 0.44
SPIDR-220ENST00000522900 FLNBO75369 2602 aaKnown RBP17.8■□□□□ 0.44
SPIDR-220ENST00000522900 CCDC188H7C350 402 aa17.8■□□□□ 0.44
SPIDR-220ENST00000522900 P2RX6O15547 441 aa17.8■□□□□ 0.44
SPIDR-220ENST00000522900 DPM1O60762 260 aa17.8■□□□□ 0.44
SPIDR-220ENST00000522900 TSPAN12O95859 305 aa17.8■□□□□ 0.44
SPIDR-220ENST00000522900 IGHEP01854 428 aa17.8■□□□□ 0.44
SPIDR-220ENST00000522900 EZRP15311 586 aaKnown RBP17.8■□□□□ 0.44
SPIDR-220ENST00000522900 CD97P48960 835 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms