RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 DFNA5O60443 496 aa11.95□□□□□ -0.5
PABPC1-219ENST00000522387 PRAMEF10O60809 474 aa11.95□□□□□ -0.5
PABPC1-219ENST00000522387 IMPDH1P20839 514 aa11.95□□□□□ -0.5
PABPC1-219ENST00000522387 PIK3CGP48736 1102 aa11.95□□□□□ -0.5
PABPC1-219ENST00000522387 MRPS35P82673 323 aaKnown RBP11.95□□□□□ -0.5
PABPC1-219ENST00000522387 SF1Q15637 639 aaKnown RBP11.95□□□□□ -0.5
PABPC1-219ENST00000522387 RBBP7Q16576 425 aa11.95□□□□□ -0.5
PABPC1-219ENST00000522387 UNC50Q53HI1 259 aa11.95□□□□□ -0.5
PABPC1-219ENST00000522387 RAB44Q7Z6P3 723 aaPredicted RBP11.95□□□□□ -0.5
PABPC1-219ENST00000522387 THOC6Q86W42 341 aaKnown RBP11.95□□□□□ -0.5
PABPC1-219ENST00000522387 RASGRP3Q8IV61 690 aa11.95□□□□□ -0.5
PABPC1-219ENST00000522387 KIAA2013Q8IYS2 634 aa11.95□□□□□ -0.5
PABPC1-219ENST00000522387 NCSTNQ92542 709 aa11.95□□□□□ -0.5
PABPC1-219ENST00000522387 DUSP23Q9BVJ7 150 aa11.95□□□□□ -0.5
PABPC1-219ENST00000522387 TNFRSF12AQ9NP84 129 aa11.95□□□□□ -0.5
PABPC1-219ENST00000522387 TMEM9BQ9NQ34 198 aa11.95□□□□□ -0.5
PABPC1-219ENST00000522387 NMRK1Q9NWW6 199 aa11.95□□□□□ -0.5
PABPC1-219ENST00000522387 UBXN7O94888 489 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 TGDSO95455 350 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 SLC2A4P14672 509 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 PEBP1P30086 187 aaKnown RBP11.94□□□□□ -0.5
PABPC1-219ENST00000522387 VHLP40337 213 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 GRIA3P42263 894 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 FASLGP48023 281 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 AQP5P55064 265 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 OCRLQ01968 901 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 STX3Q13277 289 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 GTF2H2Q13888 395 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 KPNB1Q14974 876 aaKnown RBP11.94□□□□□ -0.5
PABPC1-219ENST00000522387 RCN1Q15293 331 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 CSRP2Q16527 193 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 PERM1Q5SV97 790 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 CATSPEREQ5SY80 951 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 IRGCQ6NXR0 463 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 GTF2H2CQ6P1K8 395 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 RINLQ6ZS11 566 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 GOLGA7Q7Z5G4 137 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 ADCK2Q7Z695 626 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 SDR16C5Q8N3Y7 309 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 NEIL2Q969S2 332 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 CCDC74AQ96AQ1 378 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 MCUR1Q96AQ8 359 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 FBXL8Q96CD0 374 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 RNF31Q96EP0 1072 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 AHCYL2Q96HN2 611 aaKnown RBP11.94□□□□□ -0.5
PABPC1-219ENST00000522387 KCNA7Q96RP8 456 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 HBEGFQ99075 208 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 IPPKQ9H8X2 491 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 CCDC177Q9NQR7 707 aaPredicted RBP11.94□□□□□ -0.5
PABPC1-219ENST00000522387 KCNK4Q9NYG8 393 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 PCTPQ9UKL6 214 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 ATXN7L1Q9ULK2 861 aaPredicted RBP11.94□□□□□ -0.5
PABPC1-219ENST00000522387 ZFHX4Q86UP3 3567 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 LY6G6EA0A0G2JKS1 128 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 PIPSLA2A3N6 862 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 TMEM233B4DJY2 109 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 E7EQ34 232 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 UBFD1O14562 309 aaKnown RBP11.94□□□□□ -0.5
PABPC1-219ENST00000522387 KLK8O60259 260 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 PCDHGA12O60330 932 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 KRT36O76013 467 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 PVRP15151 417 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 GLB1P16278 677 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 NDUFS1P28331 727 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 HNMTP50135 292 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 CLCQ05315 142 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 ARL13AQ5H913 290 aaPredicted RBP11.94□□□□□ -0.5
PABPC1-219ENST00000522387 ANKS6Q68DC2 871 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 OGFOD3Q6PK18 319 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 FAM92BQ6ZTR7 304 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 PLD3Q8IV08 490 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 SLC22A9Q8IVM8 553 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 ADGRF3Q8IZF5 1079 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 RDH11Q8TC12 318 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 NMUR2Q9GZQ4 415 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 CUEDC1Q9NWM3 386 aaPredicted RBP11.94□□□□□ -0.5
PABPC1-219ENST00000522387 U3KQA8 63 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 PCNX2A6NKB5 2137 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 SPTBP11277 2137 aa11.94□□□□□ -0.5
PABPC1-219ENST00000522387 A0A1W2PPV9 198 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 A8MU76 341 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 H7BY64 318 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 STATHP02808 62 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 CHRM5P08912 532 aaPredicted RBP11.93□□□□□ -0.5
PABPC1-219ENST00000522387 ESRRAP11474 423 aaPredicted RBP11.93□□□□□ -0.5
PABPC1-219ENST00000522387 CD59P13987 128 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 NPPBP16860 134 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 SLC1A6P48664 564 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 GFERP55789 205 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 CLDN6P56747 220 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 SH3BP2P78314 561 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 KLC1Q07866 573 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 KRT72Q14CN4 511 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 SUZ12Q15022 739 aaKnown RBP11.93□□□□□ -0.5
PABPC1-219ENST00000522387 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.93□□□□□ -0.5
PABPC1-219ENST00000522387 VWA5B1Q5TIE3 1220 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 ATG16L1Q676U5 607 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 CLEC6AQ6EIG7 209 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 CAPN13Q6MZZ7 669 aaPredicted RBP11.93□□□□□ -0.5
PABPC1-219ENST00000522387 TMPRSS11BQ86T26 416 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms