RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 SLCO4C1Q6ZQN7 724 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 TMPRSS11BQ86T26 416 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 SFTPA2Q8IWL1 248 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 ADGRF3Q8IZF5 1079 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 AGR3Q8TD06 166 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 NEIL2Q969S2 332 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 PTCD3Q96EY7 689 aaKnown RBP12.6□□□□□ -0.39
CPNE3-205ENST00000522240 CCT7Q99832 543 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 RABEP2Q9H5N1 569 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 PELI2Q9HAT8 420 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 FSCN3Q9NQT6 498 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 TAC3Q9UHF0 121 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 CACNA1BQ00975 2339 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 ACACBO00763 2458 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 PIPSLA2A3N6 862 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 ZNF195O14628 629 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 NUDT21O43809 227 aaKnown RBP12.59□□□□□ -0.39
CPNE3-205ENST00000522240 RRP9O43818 475 aaKnown RBP12.59□□□□□ -0.39
CPNE3-205ENST00000522240 PRAMEF4O60810 478 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 WFS1O76024 890 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 CAPN1P07384 714 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 C1GALT1C1LP0DN25 315 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 HRH2P25021 359 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 EMP3P54852 163 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 FOXA1P55317 472 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 BIRC2Q13490 618 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 LAPTM5Q13571 262 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 NAA25Q14CX7 972 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 UGT3A2Q3SY77 523 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 XKR6Q5GH73 641 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 PAGE2BQ5JRK9 111 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 C10orf62Q5T681 223 aaPredicted RBP12.59□□□□□ -0.39
CPNE3-205ENST00000522240 PRAMEF9Q5VWM5 478 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 ICE2Q659A1 982 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 CLEC6AQ6EIG7 209 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 KLHL35Q6PF15 583 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 NXPE4Q6UWF7 544 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 MAVSQ7Z434 540 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 ZNF438Q7Z4V0 828 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 OOSP2Q86WS3 158 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 SLC35F3Q8IY50 421 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 CDYL2Q8N8U2 506 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 FAM181AQ8N9Y4 354 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 LMNTD1Q8N9Z9 388 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 SUMF1Q8NBK3 374 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 ABHD11Q8NFV4 315 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 OR4E2Q8NGC2 313 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 OR6C4Q8NGE1 309 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 OR2A1Q8NGT9 310 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 RFWD2Q8NHY2 731 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 METTL6Q8TCB7 284 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 TWIST2Q8WVJ9 160 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 CDK15Q96Q40 435 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 NRTNQ99748 197 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 PLCD4Q9BRC7 762 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 PITHD1Q9GZP4 211 aaPredicted RBP12.59□□□□□ -0.39
CPNE3-205ENST00000522240 EPB41L1Q9H4G0 881 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 MEAF6Q9HAF1 191 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 IL21RQ9HBE5 538 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 PFDN4Q9NQP4 134 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 ANKMY1Q9P2S6 941 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 GMEB2Q9UKD1 530 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 PCDHGB2Q9Y5G2 931 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 DNAJC15Q9Y5T4 150 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 SPTBN2O15020 2390 aa12.59□□□□□ -0.39
CPNE3-205ENST00000522240 ADAMTS9Q9P2N4 1935 aa12.58□□□□□ -0.39
CPNE3-205ENST00000522240 A0A0G2JND7 137 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 OR6C74A6NCV1 312 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 OR5K3A6NET4 321 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 C2orf74A8MZ97 194 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 H0YIV9 168 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 BTN3A3O00478 584 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 PPM1DO15297 605 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 SKAP2O75563 359 aaPredicted RBP12.58□□□□□ -0.4
CPNE3-205ENST00000522240 KRT6AP02538 564 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 KRT6BP04259 564 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 CDH1P12830 882 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 GLB1P16278 677 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 CD22P20273 847 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 PSMB5P28074 263 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 CMPK1P30085 196 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 KRT6CP48668 564 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 ARFIP2P53365 341 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 AQP5P55064 265 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 REEP5Q00765 189 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 BTKQ06187 659 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 PRDX1Q06830 199 aaKnown RBP12.58□□□□□ -0.4
CPNE3-205ENST00000522240 DOC2AQ14183 400 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 PDCD2Q16342 344 aaPredicted RBP12.58□□□□□ -0.4
CPNE3-205ENST00000522240 SLC5A12Q1EHB4 618 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 INAVAQ3KP66 663 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 EPGNQ6UW88 154 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 GATAD2AQ86YP4 633 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 CACNA2D3Q8IZS8 1091 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 MINDY1Q8N5J2 469 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 C2orf73Q8N5S3 287 aaPredicted RBP12.58□□□□□ -0.4
CPNE3-205ENST00000522240 DCBLD1Q8N8Z6 715 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 CCDC197Q8NCU1 140 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 KNL1Q8NG31 2342 aa12.58□□□□□ -0.4
CPNE3-205ENST00000522240 OR2L3Q8NG85 312 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms