RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 RPL21P46778 160 aaKnown RBP20.58■□□□□ 0.89
HOXA3-204ENST00000521401 OR1D4P47884 311 aa20.58■□□□□ 0.89
HOXA3-204ENST00000521401 PGDP52209 483 aa20.58■□□□□ 0.89
HOXA3-204ENST00000521401 PGGT1BP53609 377 aa20.58■□□□□ 0.89
HOXA3-204ENST00000521401 ARL4CP56559 192 aa20.58■□□□□ 0.89
HOXA3-204ENST00000521401 ARF3P61204 181 aaPredicted RBP20.58■□□□□ 0.89
HOXA3-204ENST00000521401 MRPS25P82663 173 aaKnown RBP20.58■□□□□ 0.89
HOXA3-204ENST00000521401 CBLBQ13191 982 aa20.58■□□□□ 0.89
HOXA3-204ENST00000521401 FRG1Q14331 258 aaKnown RBP20.58■□□□□ 0.89
HOXA3-204ENST00000521401 NKG7Q16617 165 aa20.58■□□□□ 0.89
HOXA3-204ENST00000521401 METTL27Q8N6F8 245 aaPredicted RBP20.58■□□□□ 0.89
HOXA3-204ENST00000521401 TEX19Q8NA77 164 aa20.58■□□□□ 0.89
HOXA3-204ENST00000521401 GABPB2Q8TAK5 448 aaPredicted RBP20.58■□□□□ 0.89
HOXA3-204ENST00000521401 C10orf90Q96M02 699 aa20.58■□□□□ 0.89
HOXA3-204ENST00000521401 IP6K3Q96PC2 410 aa20.58■□□□□ 0.89
HOXA3-204ENST00000521401 OR2A5Q96R48 311 aa20.58■□□□□ 0.89
HOXA3-204ENST00000521401 NUDT9Q9BW91 350 aa20.58■□□□□ 0.89
HOXA3-204ENST00000521401 CLMPQ9H6B4 373 aa20.58■□□□□ 0.89
HOXA3-204ENST00000521401 PDE10AQ9Y233 779 aa20.58■□□□□ 0.89
HOXA3-204ENST00000521401 SNX24Q9Y343 169 aa20.58■□□□□ 0.89
HOXA3-204ENST00000521401 EFCAB8A8MWE9 144 aa20.57■□□□□ 0.88
HOXA3-204ENST00000521401 E7ESA3 106 aa20.57■□□□□ 0.88
HOXA3-204ENST00000521401 CCNDBP1O95273 360 aa20.57■□□□□ 0.88
HOXA3-204ENST00000521401 EIF2S1P05198 315 aaKnown RBP20.57■□□□□ 0.88
HOXA3-204ENST00000521401 PIM1P11309 404 aaPredicted RBP20.57■□□□□ 0.88
HOXA3-204ENST00000521401 RRADP55042 308 aa20.57■□□□□ 0.88
HOXA3-204ENST00000521401 ABATP80404 500 aa20.57■□□□□ 0.88
HOXA3-204ENST00000521401 RELAQ04206 551 aa20.57■□□□□ 0.88
HOXA3-204ENST00000521401 FASTKD3Q14CZ7 662 aaKnown RBP20.57■□□□□ 0.88
HOXA3-204ENST00000521401 LRRC8EQ6NSJ5 796 aa20.57■□□□□ 0.88
HOXA3-204ENST00000521401 C17orf53Q8N3J3 647 aaPredicted RBP20.57■□□□□ 0.88
HOXA3-204ENST00000521401 ARHGEF39Q8N4T4 335 aa20.57■□□□□ 0.88
HOXA3-204ENST00000521401 WDR54Q9H977 334 aa20.57■□□□□ 0.88
HOXA3-204ENST00000521401 PPANQ9NQ55 473 aaKnown RBP20.57■□□□□ 0.88
HOXA3-204ENST00000521401 CUEDC1Q9NWM3 386 aaPredicted RBP20.57■□□□□ 0.88
HOXA3-204ENST00000521401 P4HTMQ9NXG6 502 aa20.57■□□□□ 0.88
HOXA3-204ENST00000521401 CTSFQ9UBX1 484 aa20.57■□□□□ 0.88
HOXA3-204ENST00000521401 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.57■□□□□ 0.88
HOXA3-204ENST00000521401 MAU2Q9Y6X3 613 aa20.57■□□□□ 0.88
HOXA3-204ENST00000521401 A6NL46 340 aa20.56■□□□□ 0.88
HOXA3-204ENST00000521401 VSTM2BA6NLU5 285 aa20.56■□□□□ 0.88
HOXA3-204ENST00000521401 MASP2O00187 686 aa20.56■□□□□ 0.88
HOXA3-204ENST00000521401 RGS4P49798 205 aa20.56■□□□□ 0.88
HOXA3-204ENST00000521401 FOXK1P85037 733 aa20.56■□□□□ 0.88
HOXA3-204ENST00000521401 IGFBP7Q16270 282 aa20.56■□□□□ 0.88
HOXA3-204ENST00000521401 DCAF10Q5QP82 559 aa20.56■□□□□ 0.88
HOXA3-204ENST00000521401 HECTD2Q5U5R9 776 aa20.56■□□□□ 0.88
HOXA3-204ENST00000521401 ANKMY2Q8IV38 441 aa20.56■□□□□ 0.88
HOXA3-204ENST00000521401 LINGO1Q96FE5 620 aa20.56■□□□□ 0.88
HOXA3-204ENST00000521401 CCDC138Q96M89 665 aa20.56■□□□□ 0.88
HOXA3-204ENST00000521401 OLFM1Q99784 485 aa20.56■□□□□ 0.88
HOXA3-204ENST00000521401 ABCF3Q9NUQ8 709 aa20.56■□□□□ 0.88
HOXA3-204ENST00000521401 MOCS1Q9NZB8 636 aa20.56■□□□□ 0.88
HOXA3-204ENST00000521401 PCDHGB7Q9Y5F8 929 aa20.56■□□□□ 0.88
HOXA3-204ENST00000521401 MED13Q9UHV7 2174 aa20.56■□□□□ 0.88
HOXA3-204ENST00000521401 SLC16A5O15375 505 aa20.55■□□□□ 0.88
HOXA3-204ENST00000521401 C8GP07360 202 aa20.55■□□□□ 0.88
HOXA3-204ENST00000521401 FDXRP22570 491 aa20.55■□□□□ 0.88
HOXA3-204ENST00000521401 EMP3P54852 163 aa20.55■□□□□ 0.88
HOXA3-204ENST00000521401 PDIA2Q13087 525 aaKnown RBP20.55■□□□□ 0.88
HOXA3-204ENST00000521401 SP140Q13342 867 aa20.55■□□□□ 0.88
HOXA3-204ENST00000521401 PHKG1Q16816 387 aa20.55■□□□□ 0.88
HOXA3-204ENST00000521401 ZXDCQ2QGD7 858 aaPredicted RBP20.55■□□□□ 0.88
HOXA3-204ENST00000521401 NADK2Q4G0N4 442 aa20.55■□□□□ 0.88
HOXA3-204ENST00000521401 MBOAT1Q6ZNC8 495 aa20.55■□□□□ 0.88
HOXA3-204ENST00000521401 FBXO36Q8NEA4 188 aa20.55■□□□□ 0.88
HOXA3-204ENST00000521401 SPATA4Q8NEY3 305 aa20.55■□□□□ 0.88
HOXA3-204ENST00000521401 MCOLN3Q8TDD5 553 aa20.55■□□□□ 0.88
HOXA3-204ENST00000521401 FER1L6-AS2Q96M78 137 aa20.55■□□□□ 0.88
HOXA3-204ENST00000521401 SMAD5Q99717 465 aaKnown RBP20.55■□□□□ 0.88
HOXA3-204ENST00000521401 PARVBQ9HBI1 364 aa20.55■□□□□ 0.88
HOXA3-204ENST00000521401 RUVBL1Q9Y265 456 aaKnown RBP20.55■□□□□ 0.88
HOXA3-204ENST00000521401 VWA7Q9Y334 891 aa20.55■□□□□ 0.88
HOXA3-204ENST00000521401 ZNF451Q9Y4E5 1061 aa20.55■□□□□ 0.88
HOXA3-204ENST00000521401 PSAT1Q9Y617 370 aa20.55■□□□□ 0.88
HOXA3-204ENST00000521401 H7BY64 318 aa20.54■□□□□ 0.88
HOXA3-204ENST00000521401 PEX12O00623 359 aa20.54■□□□□ 0.88
HOXA3-204ENST00000521401 HAT1O14929 419 aa20.54■□□□□ 0.88
HOXA3-204ENST00000521401 EZRP15311 586 aaKnown RBP20.54■□□□□ 0.88
HOXA3-204ENST00000521401 MMP11P24347 488 aa20.54■□□□□ 0.88
HOXA3-204ENST00000521401 TBPL1P62380 186 aa20.54■□□□□ 0.88
HOXA3-204ENST00000521401 MUM1Q2TAK8 710 aa20.54■□□□□ 0.88
HOXA3-204ENST00000521401 HKDC1Q2TB90 917 aa20.54■□□□□ 0.88
HOXA3-204ENST00000521401 PRMT9Q6P2P2 845 aa20.54■□□□□ 0.88
HOXA3-204ENST00000521401 PLD3Q8IV08 490 aa20.54■□□□□ 0.88
HOXA3-204ENST00000521401 MYO1HQ8N1T3 1032 aa20.54■□□□□ 0.88
HOXA3-204ENST00000521401 CSNK1A1LQ8N752 337 aa20.54■□□□□ 0.88
HOXA3-204ENST00000521401 GPATCH11Q8N954 259 aa20.54■□□□□ 0.88
HOXA3-204ENST00000521401 NACC2Q96BF6 587 aa20.54■□□□□ 0.88
HOXA3-204ENST00000521401 PRAP1Q96NZ9 151 aa20.54■□□□□ 0.88
HOXA3-204ENST00000521401 SOX17Q9H6I2 414 aaPredicted RBP20.54■□□□□ 0.88
HOXA3-204ENST00000521401 ZNF304Q9HCX3 659 aa20.54■□□□□ 0.88
HOXA3-204ENST00000521401 GPR83Q9NYM4 423 aa20.54■□□□□ 0.88
HOXA3-204ENST00000521401 CORO1CQ9ULV4 474 aaPredicted RBP20.54■□□□□ 0.88
HOXA3-204ENST00000521401 SOCS6O14544 535 aa20.53■□□□□ 0.88
HOXA3-204ENST00000521401 MLLT10P55197 1068 aa20.53■□□□□ 0.88
HOXA3-204ENST00000521401 SNRPNP63162 240 aaKnown RBP20.53■□□□□ 0.88
HOXA3-204ENST00000521401 MGAT5Q09328 741 aa20.53■□□□□ 0.88
HOXA3-204ENST00000521401 RAPSNQ13702 412 aa20.53■□□□□ 0.88
HOXA3-204ENST00000521401 THEMIS2Q5TEJ8 643 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms